RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 IL9P15248 144 aa1.96□□□□□ -2.1
AC055878.1-201ENST00000531858 UBA52P62987 128 aaKnown RBP1.96□□□□□ -2.1
AC055878.1-201ENST00000531858 CYP2G1PQ6ZSU1 146 aa1.96□□□□□ -2.1
AC055878.1-201ENST00000531858 C15orf53Q8NAA6 179 aa1.96□□□□□ -2.1
AC055878.1-201ENST00000531858 ZNF563Q8TA94 476 aa1.96□□□□□ -2.1
AC055878.1-201ENST00000531858 MYOZ3Q8TDC0 251 aa1.96□□□□□ -2.1
AC055878.1-201ENST00000531858 Q9H521 79 aa1.96□□□□□ -2.1
AC055878.1-201ENST00000531858 CASKIN1Q8WXD9 1431 aa1.96□□□□□ -2.1
AC055878.1-201ENST00000531858 NCKAP5O14513 1909 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 MYH6P13533 1939 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 CASZ1Q86V15 1759 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 SPHKAPQ2M3C7 1700 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 IGKV3D-7A0A0C4DH55 119 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 IGKV3OR2-268A0A0C4DH90 116 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 RBAKDNA6NC62 111 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 HCG22E2RYF7 251 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 SPTSSBQ8NFR3 76 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 LAMB1P07942 1786 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 MYO9BQ13459 2157 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 MUC4Q99102 2169 aa1.95□□□□□ -2.1
AC055878.1-201ENST00000531858 MAGI1Q96QZ7 1491 aaPredicted RBP1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 COL5A3P25940 1745 aaPredicted RBP1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 MYH13Q9UKX3 1938 aa1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 TRBV7-1A0A0A6YYK4 115 aa1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 UBE2D1P51668 147 aa1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 KRTDAPP60985 99 aa1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 RPL37AP61513 92 aaKnown RBP1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 SPRNQ5BIV9 151 aa1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 C10orf82Q8WW14 230 aa1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 LINC00312Q9Y6C7 94 aa1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 ZFC3H1O60293 1989 aaKnown RBP1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 PXDNQ92626 1479 aa1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 ZFHX2Q9C0A1 2572 aaPredicted RBP1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 BRWD1Q9NSI6 2320 aa1.94□□□□□ -2.1
AC055878.1-201ENST00000531858 SCN3AQ9NY46 2000 aa1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 BLMP54132 1417 aaPredicted RBP1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 SCAPERQ9BY12 1400 aa1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 TRBV6-7A0A0A0MS04 114 aa1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 PRB4P10163 310 aaPredicted RBP1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 Q0VG73 95 aa1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 PCOTHQ58A44 107 aa1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 XAF1Q6GPH4 301 aa1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 VWDEQ8N2E2 1590 aa1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 NUMA1Q14980 2115 aa1.93□□□□□ -2.1
AC055878.1-201ENST00000531858 PPIP5K1Q6PFW1 1433 aa1.92□□□□□ -2.1
AC055878.1-201ENST00000531858 MDC1Q14676 2089 aaKnown RBP1.92□□□□□ -2.1
AC055878.1-201ENST00000531858 ALPK3Q96L96 1907 aa1.92□□□□□ -2.1
AC055878.1-201ENST00000531858 NAP1L6A6NFF2 107 aa1.92□□□□□ -2.1
AC055878.1-201ENST00000531858 SSBP1Q04837 148 aaKnown RBP1.92□□□□□ -2.1
AC055878.1-201ENST00000531858 VAMP8Q9BV40 100 aa1.92□□□□□ -2.1
AC055878.1-201ENST00000531858 SCP2D1Q9UJQ7 156 aa1.92□□□□□ -2.1
AC055878.1-201ENST00000531858 PLXNA4Q9HCM2 1894 aa1.92□□□□□ -2.1
AC055878.1-201ENST00000531858 KIAA1549Q9HCM3 1950 aa1.91□□□□□ -2.1
AC055878.1-201ENST00000531858 IGKV2-40A0A087WW87 121 aaPredicted RBP1.91□□□□□ -2.1
AC055878.1-201ENST00000531858 IGKV2D-40P01614 121 aaPredicted RBP1.91□□□□□ -2.1
AC055878.1-201ENST00000531858 C9orf62Q8N4C0 152 aa1.91□□□□□ -2.1
AC055878.1-201ENST00000531858 MICAL3Q7RTP6 2002 aa1.91□□□□□ -2.1
AC055878.1-201ENST00000531858 ABCC5O15440 1437 aa1.91□□□□□ -2.1
AC055878.1-201ENST00000531858 NBDYA0A0U1RRE5 68 aa1.9□□□□□ -2.11
AC055878.1-201ENST00000531858 MT-ATP8P03928 68 aa1.9□□□□□ -2.11
AC055878.1-201ENST00000531858 CCL3L1P16619 93 aa1.9□□□□□ -2.11
AC055878.1-201ENST00000531858 SNCAP37840 140 aa1.9□□□□□ -2.11
AC055878.1-201ENST00000531858 BET1LQ9NYM9 111 aa1.9□□□□□ -2.11
AC055878.1-201ENST00000531858 ZNF142P52746 1687 aaPredicted RBP1.9□□□□□ -2.11
AC055878.1-201ENST00000531858 NDUFC1O43677 76 aa1.89□□□□□ -2.11
AC055878.1-201ENST00000531858 TFF1P04155 84 aa1.89□□□□□ -2.11
AC055878.1-201ENST00000531858 ASIPP42127 132 aa1.89□□□□□ -2.11
AC055878.1-201ENST00000531858 FXYD4P59646 89 aa1.89□□□□□ -2.11
AC055878.1-201ENST00000531858 ELOF1P60002 83 aaKnown RBP1.89□□□□□ -2.11
AC055878.1-201ENST00000531858 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
AC055878.1-201ENST00000531858 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
AC055878.1-201ENST00000531858 FAM74A4Q5TZK3 123 aa1.89□□□□□ -2.11
AC055878.1-201ENST00000531858 RBBP6Q7Z6E9 1792 aaKnown RBP1.89□□□□□ -2.11
AC055878.1-201ENST00000531858 ANK1P16157 1881 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 PRDM15P57071 1507 aaPredicted RBP1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 MPDZO75970 2070 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 CTTNBP2Q8WZ74 1663 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 LOC101927531A0A1B0GV80 90 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 IGLC1P0CG04 106 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 GNG11P61952 73 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 FXYD3Q14802 87 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 C6orf52Q5T4I8 152 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 FAM167A-AS1Q96KT0 104 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 MYH9P35579 1960 aaKnown RBP1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 PLXNA2O75051 1894 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 MED14O60244 1454 aa1.88□□□□□ -2.11
AC055878.1-201ENST00000531858 DIDO1Q9BTC0 2240 aaKnown RBP1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 TRBV7-3A0A075B6L6 115 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 ATOX1O00244 68 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 GNGT2O14610 69 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 GYPAP02724 150 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 KLKP1Q107X0 134 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 ZNF56Q15929 161 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 C10orf128Q5T292 105 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 C20orf197Q8N268 126 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 C5orf56Q8N8D9 126 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 COX7B2Q8TF08 81 aa1.87□□□□□ -2.11
AC055878.1-201ENST00000531858 OBSCN-AS1Q96MR7 158 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms