RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 ZNF80P51504 273 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-221ENST00000531582 NSUN5P1Q3KNT7 163 aa3.53□□□□□ -1.84
ECHDC1-221ENST00000531582 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.53□□□□□ -1.84
ECHDC1-221ENST00000531582 LINC00474Q9P2X8 69 aa3.53□□□□□ -1.84
ECHDC1-221ENST00000531582 TNRC6BQ9UPQ9 1833 aaKnown RBP3.53□□□□□ -1.84
ECHDC1-221ENST00000531582 PCNX2A6NKB5 2137 aa3.53□□□□□ -1.84
ECHDC1-221ENST00000531582 CEP290O15078 2479 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 PRRC2AP48634 2157 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 FER1L5A0AVI2 2057 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV6D-21A0A0A0MT36 114 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV6-21A0A0C4DH24 114 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 WNT9BO14905 357 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV1-5P01602 117 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 IGHV4-34P06331 123 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 CIRBPQ14011 172 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 ASB16-AS1Q495Z4 193 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 ZNF524Q96C55 264 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 SPACA5Q96QH8 159 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 OVOL2Q9BRP0 275 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 PROK2Q9HC23 129 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 ICOSQ9Y6W8 199 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 CACNA1CQ13936 2221 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 KIAA0100Q14667 2235 aaKnown RBP3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 MYO7BQ6PIF6 2116 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 ABCA7Q8IZY2 2146 aa3.52□□□□□ -1.85
ECHDC1-221ENST00000531582 IGHV1OR21-1A0A087WYE8 117 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 CXorf51AA0A1B0GTR3 108 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 SDHAF1A6NFY7 115 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 D6R8Y8 96 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 F8WEM9 126 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 H0Y9J4 135 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 H3BSH0 61 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 COX7A2LO14548 114 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 FSTL3O95633 263 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV1-39P01597 117 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 IGHV4-39P01824 125 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV1D-39P04432 117 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 MIFP14174 115 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 S100A4P26447 101 aaKnown RBP3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 ZNF137PP52743 207 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 MP68P56378 58 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 Q1RN00 199 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 C9orf47Q6ZRZ4 202 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 NOTCH2NLQ7Z3S9 236 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 FAM216BQ8N7L0 139 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 Q8N9P0 234 aaPredicted RBP3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 CCL28Q9NRJ3 127 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 SPRR3Q9UBC9 169 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 CABIN1Q9Y6J0 2220 aa3.51□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV1D-17A0A075B6S4 117 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 IGHV3OR16-10A0A075B7F0 116 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 IGHV1OR15-9A0A0B4J2B8 117 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 TRGV8A0A0C4DH27 118 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV1-9A0A0C4DH69 117 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 KLLNB2CW77 178 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 C4orf51C9J302 202 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 CD28P10747 220 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 FUSP35637 526 aaKnown RBP eCLIP3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 CYP4F30PQ9H0H9 118 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 PHLDA3Q9Y5J5 127 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 SMAD5-AS1Q9Y6J3 95 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 BPTFQ12830 3046 aa3.5□□□□□ -1.85
ECHDC1-221ENST00000531582 LRRK1Q38SD2 2015 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 MED12Q93074 2177 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV1D-43A0A0B4J1Z2 117 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 PPP1R17O96001 155 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 DNAL4O96015 105 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 PRSS2P07478 247 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 SFTA2Q6UW10 78 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 FOXL2NBQ6ZUU3 175 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 FAM19A3Q7Z5A8 133 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 Q8IYB0 196 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 ZNF491Q8N8L2 437 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 FGFBP3Q8TAT2 258 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 FXYD5Q96DB9 178 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 ARRDC1-AS1Q9H2J1 176 aa3.49□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV1D-42A0A075B6H8 117 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV1D-13A0A0B4J2D9 117 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 IGHV4-28A0A0C4DH34 117 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 LOC389332A0A1B0GUA5 103 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 A6NN06 94 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 PSPHP1O15172 72 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 IGHV3-13P01766 116 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 LINC00271P0C7V0 271 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 SAA1P0DJI8 122 aaPredicted RBP3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 IGKV1-13P0DP09 117 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 RPS27P42677 84 aaKnown RBP3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 Q6ZSV7 163 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 MIR17HGQ75NE6 70 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 FAM167A-AS1Q96KT0 104 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 SCGB3A1Q96QR1 104 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 TRIOBPQ9H2D6 2365 aa3.48□□□□□ -1.85
ECHDC1-221ENST00000531582 XIRP2A4UGR9 3374 aa3.47□□□□□ -1.85
ECHDC1-221ENST00000531582 IGHV1-69DA0A0B4J2H0 117 aa3.47□□□□□ -1.85
ECHDC1-221ENST00000531582 C11orf86A6NJI1 115 aa3.47□□□□□ -1.85
ECHDC1-221ENST00000531582 INAFM1C9JVW0 142 aa3.47□□□□□ -1.85
ECHDC1-221ENST00000531582 E7EUB6 86 aa3.47□□□□□ -1.85
ECHDC1-221ENST00000531582 C19orf84I3L1E1 186 aa3.47□□□□□ -1.85
ECHDC1-221ENST00000531582 NDUFA3O95167 84 aa3.47□□□□□ -1.85
ECHDC1-221ENST00000531582 IGLV3-27P01718 113 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms