RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 SPINK8P0C7L1 97 aa1.56□□□□□ -2.16
USP47-211ENST00000531513 ATP5EP56381 51 aaPredicted RBP1.56□□□□□ -2.16
USP47-211ENST00000531513 KRTAP21-3Q3LHN1 58 aa1.56□□□□□ -2.16
USP47-211ENST00000531513 TTC9CQ8N5M4 171 aa1.56□□□□□ -2.16
USP47-211ENST00000531513 LIMD2Q9BT23 127 aa1.56□□□□□ -2.16
USP47-211ENST00000531513 WFDC10AQ9H1F0 79 aa1.56□□□□□ -2.16
USP47-211ENST00000531513 HEATR1Q9H583 2144 aaKnown RBP1.56□□□□□ -2.16
USP47-211ENST00000531513 MRPL35Q9NZE8 188 aaKnown RBP1.56□□□□□ -2.16
USP47-211ENST00000531513 PTPRFP10586 1907 aa1.56□□□□□ -2.16
USP47-211ENST00000531513 IFT140Q96RY7 1462 aa1.56□□□□□ -2.16
USP47-211ENST00000531513 ZFYVE16Q7Z3T8 1539 aa1.56□□□□□ -2.16
USP47-211ENST00000531513 NRKQ7Z2Y5 1582 aa1.55□□□□□ -2.16
USP47-211ENST00000531513 TCRBV3S1A0A5B6 114 aa1.55□□□□□ -2.16
USP47-211ENST00000531513 OOSP1A8MZH6 123 aa1.55□□□□□ -2.16
USP47-211ENST00000531513 TMEM262E9PQX1 116 aa1.55□□□□□ -2.16
USP47-211ENST00000531513 IGLV3-1P01715 115 aa1.55□□□□□ -2.16
USP47-211ENST00000531513 UBE2G1P62253 170 aa1.55□□□□□ -2.16
USP47-211ENST00000531513 Q6ZSA8 131 aa1.55□□□□□ -2.16
USP47-211ENST00000531513 C5orf38Q86SI9 138 aa1.55□□□□□ -2.16
USP47-211ENST00000531513 Q8N8P6 123 aa1.55□□□□□ -2.16
USP47-211ENST00000531513 MYH7P12883 1935 aa1.55□□□□□ -2.16
USP47-211ENST00000531513 HELZP42694 1942 aaKnown RBP1.55□□□□□ -2.16
USP47-211ENST00000531513 TRAV23DV6A0A075B6W5 121 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 TRBV10-3A0A0K0K1G6 114 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 TEX49A0A1B0GTD5 131 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 H3BQ15 152 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 SSSCA1O60232 199 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 CCKP06307 115 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 DCDP81605 110 aaKnown RBP1.54□□□□□ -2.16
USP47-211ENST00000531513 IQCJQ1A5X6 159 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 ODF3Q96PU9 254 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 ZNF609O15014 1411 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 LRP5O75197 1615 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 PHRF1Q9P1Y6 1649 aaKnown RBP1.54□□□□□ -2.16
USP47-211ENST00000531513 CUL7Q14999 1698 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 QRICH2Q9H0J4 1663 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 MYH6P13533 1939 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 MYH13Q9UKX3 1938 aa1.54□□□□□ -2.16
USP47-211ENST00000531513 UBE2L5PA0A1B0GUS4 154 aa1.53□□□□□ -2.16
USP47-211ENST00000531513 KDM6BO15054 1643 aa1.53□□□□□ -2.16
USP47-211ENST00000531513 ANGP03950 147 aaKnown RBP1.53□□□□□ -2.16
USP47-211ENST00000531513 UBE2L3P68036 154 aaKnown RBP1.53□□□□□ -2.16
USP47-211ENST00000531513 SCRIBQ14160 1630 aa1.53□□□□□ -2.16
USP47-211ENST00000531513 COL5A1-AS1Q5SY13 56 aa1.53□□□□□ -2.16
USP47-211ENST00000531513 PPP1R1CQ8WVI7 109 aa1.53□□□□□ -2.16
USP47-211ENST00000531513 CACNA1BQ00975 2339 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 ATG2AQ2TAZ0 1938 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 KIF13AQ9H1H9 1805 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 E9PCH4 1651 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 TRAV12-3A0A0B4J271 114 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 GNG2P59768 71 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 CCL8P80075 99 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 S100A7L2Q5SY68 101 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 NCMAPQ5T1S8 102 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 ZNF818PQ6ZRF7 136 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 COMMD6Q7Z4G1 85 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 DEFB132Q7Z7B7 95 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 SBSPONQ8IVN8 264 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 IFI27L1Q96BM0 104 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 AP4S1Q9Y587 144 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 MUC4Q99102 2169 aa1.52□□□□□ -2.17
USP47-211ENST00000531513 PTPRMP28827 1452 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 CPSF1Q10570 1443 aaKnown RBP1.51□□□□□ -2.17
USP47-211ENST00000531513 TNRC6AQ8NDV7 1962 aaKnown RBP1.51□□□□□ -2.17
USP47-211ENST00000531513 AKAP11Q9UKA4 1901 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 LINC00032P0C843 101 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 PRB4P10163 310 aaPredicted RBP1.51□□□□□ -2.17
USP47-211ENST00000531513 S100A10P60903 97 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
USP47-211ENST00000531513 RBM3P98179 157 aaKnown RBP1.51□□□□□ -2.17
USP47-211ENST00000531513 INSL4Q14641 139 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 CYP2G1PQ6ZSU1 146 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 DSCR8Q96T75 97 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 AMELYQ99218 206 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 CYP4F30PQ9H0H9 118 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 ANK1P16157 1881 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 PEAK1Q9H792 1746 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 UNC13CQ8NB66 2214 aa1.51□□□□□ -2.17
USP47-211ENST00000531513 CASZ1Q86V15 1759 aa1.5□□□□□ -2.17
USP47-211ENST00000531513 BCORL1Q5H9F3 1711 aa1.5□□□□□ -2.17
USP47-211ENST00000531513 TRAV13-2A0A0B4J235 113 aa1.5□□□□□ -2.17
USP47-211ENST00000531513 PVALEFA0A1B0GWK0 134 aa1.5□□□□□ -2.17
USP47-211ENST00000531513 SIX6O95475 246 aa1.5□□□□□ -2.17
USP47-211ENST00000531513 XAF1Q6GPH4 301 aa1.5□□□□□ -2.17
USP47-211ENST00000531513 DPH3P1Q9H4G8 78 aa1.5□□□□□ -2.17
USP47-211ENST00000531513 CDK12Q9NYV4 1490 aaPredicted RBP1.5□□□□□ -2.17
USP47-211ENST00000531513 NSD3Q9BZ95 1437 aa1.49□□□□□ -2.17
USP47-211ENST00000531513 FXYD4P59646 89 aa1.49□□□□□ -2.17
USP47-211ENST00000531513 MYOZ3Q8TDC0 251 aa1.49□□□□□ -2.17
USP47-211ENST00000531513 DPY30Q9C005 99 aa1.49□□□□□ -2.17
USP47-211ENST00000531513 ABCC10Q5T3U5 1492 aa1.49□□□□□ -2.17
USP47-211ENST00000531513 C10orf71Q711Q0 1435 aa1.49□□□□□ -2.17
USP47-211ENST00000531513 HCG22E2RYF7 251 aa1.48□□□□□ -2.17
USP47-211ENST00000531513 C10orf82Q8WW14 230 aa1.48□□□□□ -2.17
USP47-211ENST00000531513 BET1LQ9NYM9 111 aa1.48□□□□□ -2.17
USP47-211ENST00000531513 MYH9P35579 1960 aaKnown RBP1.48□□□□□ -2.17
USP47-211ENST00000531513 TEX14Q8IWB6 1497 aa1.48□□□□□ -2.17
USP47-211ENST00000531513 PTPRDP23468 1912 aa1.48□□□□□ -2.17
USP47-211ENST00000531513 CTTNBP2Q8WZ74 1663 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms