RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 RGPD3A6NKT7 1758 aaPredicted RBP2.08□□□□□ -2.08
PTPRK-220ENST00000531466 ERCC6L2Q5T890 1561 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 CDC42BPGQ6DT37 1551 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 DOCK4Q8N1I0 1966 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 DYSFO75923 2080 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 PREX1Q8TCU6 1659 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 IGLV11-55A0A075B6I3 123 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 IGLV3-9A0A075B6K5 115 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 TRBV7-1A0A0A6YYK4 115 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 IGHV5-51A0A0C4DH38 117 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 LOC285095A0A1B0GVY8 99 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 H3BMM0 161 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 H7BZZ5 65 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 GNRH2O43555 120 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 SLC25A20O43772 301 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 INSP01308 110 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 IGLV2-23P01705 113 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 CCL3P10147 92 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 ZNF816Q0VGE8 651 aaPredicted RBP2.07□□□□□ -2.08
PTPRK-220ENST00000531466 ZNF56Q15929 161 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 RNASE13Q5GAN3 156 aaKnown RBP2.07□□□□□ -2.08
PTPRK-220ENST00000531466 DEFB121Q5J5C9 76 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 S100A7L2Q5SY68 101 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 ATP5EP2Q5VTU8 51 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 VMO1Q7Z5L0 202 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 DYNAPQ8N1N2 210 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 LINC00269Q8N2A0 174 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 UBE2WQ96B02 151 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 TTTY13Q9BZ97 58 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 GABARAPL1Q9H0R8 117 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 ARL2-SNX15V9GYD0 113 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 RALGAPA2Q2PPJ7 1873 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 MYLKQ15746 1914 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 CCDC88CQ9P219 2028 aa2.07□□□□□ -2.08
PTPRK-220ENST00000531466 DOCK8Q8NF50 2099 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 MROH2BQ7Z745 1585 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 RGPD2P0DJD1 1756 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 IGHV5-10-1A0A0J9YXX1 117 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 A0A1B0GWA3 101 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 SH2D1AO60880 128 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 CPSF4O95639 269 aaKnown RBP2.06□□□□□ -2.08
PTPRK-220ENST00000531466 COX6CP09669 75 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 IGHV1-8P0DP01 117 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 KISS1Q15726 138 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 CASC2Q6XLA1 102 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 ZNF826PQ6ZT77 177 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 SMCR5Q8TEV8 140 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 SMIM4Q8WVI0 70 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 IFI27L1Q96BM0 104 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 ZNF355PQ9NSJ1 428 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 GNG13Q9P2W3 67 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 PRO1854Q9UHT4 67 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 NDUFA12Q9UI09 145 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 NEXMIFQ5QGS0 1516 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 USP32Q8NFA0 1604 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 ALS2Q96Q42 1657 aa2.06□□□□□ -2.08
PTPRK-220ENST00000531466 CRYBG1Q9Y4K1 1723 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 KDM3BQ7LBC6 1761 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 PLXNA4Q9HCM2 1894 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 FCGBPQ9Y6R7 5405 aaPredicted RBP2.05□□□□□ -2.08
PTPRK-220ENST00000531466 POLEQ07864 2286 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 TRBV7-3A0A075B6L6 115 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 LY6HO94772 140 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 HMGN2P05204 90 aaKnown RBP2.05□□□□□ -2.08
PTPRK-220ENST00000531466 CCL5P13501 91 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 XCL1P47992 114 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 CMC4P56277 68 aaPredicted RBP2.05□□□□□ -2.08
PTPRK-220ENST00000531466 DSCR4P56555 118 aaPredicted RBP2.05□□□□□ -2.08
PTPRK-220ENST00000531466 SUPT4H1P63272 117 aaKnown RBP2.05□□□□□ -2.08
PTPRK-220ENST00000531466 SSBP1Q04837 148 aaKnown RBP2.05□□□□□ -2.08
PTPRK-220ENST00000531466 SDIM1Q6ZPB5 146 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 FAM167A-AS1Q96KT0 104 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 NMES1Q9C002 83 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 RPP21Q9H633 154 aaKnown RBP2.05□□□□□ -2.08
PTPRK-220ENST00000531466 C14orf132Q9NPU4 83 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 USP54Q70EL1 1684 aa2.05□□□□□ -2.08
PTPRK-220ENST00000531466 TRAV7A0A075B6U4 112 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 A0A0B4J2C4 111 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 LOC107984156A0A0G2JMH3 177 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 IGHV3-64DA0A0J9YX35 117 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 MYMXA0A1B0GTQ4 84 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 A6NED7 52 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 KDM6BO15054 1643 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 MCM3APO60318 1980 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 SLIT2O94813 1529 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 POLR1AO95602 1720 aaPredicted RBP2.04□□□□□ -2.08
PTPRK-220ENST00000531466 IGLV3-25P01717 112 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 IGHV1-46P01743 117 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 PRH1P02810 166 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 CD24P25063 80 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 CPS1P31327 1500 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 NUP98P52948 1817 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 FXYD2P54710 66 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 UBE2D3P61077 147 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 UBE2D2P62837 147 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 PLGLAQ15195 96 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 C2orf16Q68DN1 1984 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 ARL17AQ8IVW1 177 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 PATJQ8NI35 1801 aa2.04□□□□□ -2.08
PTPRK-220ENST00000531466 PPP1R1CQ8WVI7 109 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms