RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 ERVFC1-1P60608 527 aa12.36□□□□□ -0.43
PTPN11-204ENST00000531326 CFAP126Q5VTH2 177 aa12.36□□□□□ -0.43
PTPN11-204ENST00000531326 UQCC3Q6UW78 93 aa12.36□□□□□ -0.43
PTPN11-204ENST00000531326 COMMD7Q86VX2 200 aa12.36□□□□□ -0.43
PTPN11-204ENST00000531326 OR4C5Q8NGB2 326 aa12.36□□□□□ -0.43
PTPN11-204ENST00000531326 OR10AG1Q8NH19 301 aa12.36□□□□□ -0.43
PTPN11-204ENST00000531326 XKRY2A2RUG3 117 aa12.35□□□□□ -0.43
PTPN11-204ENST00000531326 GATCO43716 136 aaKnown RBP12.35□□□□□ -0.43
PTPN11-204ENST00000531326 NXPH4O95158 308 aa12.35□□□□□ -0.43
PTPN11-204ENST00000531326 ADIRFQ15847 76 aa12.35□□□□□ -0.43
PTPN11-204ENST00000531326 ZFP82Q8N141 532 aa12.35□□□□□ -0.43
PTPN11-204ENST00000531326 SYT8Q8NBV8 401 aa12.35□□□□□ -0.43
PTPN11-204ENST00000531326 JPT2Q9H910 190 aa12.35□□□□□ -0.43
PTPN11-204ENST00000531326 OSTCQ9NRP0 149 aa12.35□□□□□ -0.43
PTPN11-204ENST00000531326 TRAV26-1A0A087WT03 109 aa12.34□□□□□ -0.43
PTPN11-204ENST00000531326 MUC21A0A0G2JKD1 596 aa12.34□□□□□ -0.43
PTPN11-204ENST00000531326 MUC21A0A140T8X8 626 aa12.34□□□□□ -0.43
PTPN11-204ENST00000531326 M0R381 172 aa12.34□□□□□ -0.43
PTPN11-204ENST00000531326 MAPKAPK5-AS1Q8N8E1 139 aa12.34□□□□□ -0.43
PTPN11-204ENST00000531326 FER1L6-AS1Q8NA97 138 aa12.34□□□□□ -0.43
PTPN11-204ENST00000531326 VSIG2Q96IQ7 327 aa12.34□□□□□ -0.43
PTPN11-204ENST00000531326 KRTAP1-5Q9BYS1 174 aa12.34□□□□□ -0.43
PTPN11-204ENST00000531326 DNAH5Q8TE73 4624 aa12.33□□□□□ -0.44
PTPN11-204ENST00000531326 CT83Q5H943 113 aa12.33□□□□□ -0.44
PTPN11-204ENST00000531326 Q9H8V8 135 aa12.33□□□□□ -0.44
PTPN11-204ENST00000531326 A0A0J9YY99 117 aa12.32□□□□□ -0.44
PTPN11-204ENST00000531326 A8MWV9 139 aa12.32□□□□□ -0.44
PTPN11-204ENST00000531326 CTRLP40313 264 aa12.32□□□□□ -0.44
PTPN11-204ENST00000531326 UFSP1Q6NVU6 142 aa12.32□□□□□ -0.44
PTPN11-204ENST00000531326 GTSF1Q8WW33 167 aa12.32□□□□□ -0.44
PTPN11-204ENST00000531326 SFRP2Q96HF1 295 aa12.32□□□□□ -0.44
PTPN11-204ENST00000531326 TPPP3Q9BW30 176 aa12.32□□□□□ -0.44
PTPN11-204ENST00000531326 SAMD10Q9BYL1 202 aa12.32□□□□□ -0.44
PTPN11-204ENST00000531326 V9GYV3 84 aa12.32□□□□□ -0.44
PTPN11-204ENST00000531326 IGHV3-73A0A0B4J1V6 119 aa12.31□□□□□ -0.44
PTPN11-204ENST00000531326 TRGV4A0A0C4DH28 118 aa12.31□□□□□ -0.44
PTPN11-204ENST00000531326 A0A1W2PPQ1 181 aa12.31□□□□□ -0.44
PTPN11-204ENST00000531326 TMEM218A2RU14 115 aa12.31□□□□□ -0.44
PTPN11-204ENST00000531326 ADCYAP1P18509 176 aa12.31□□□□□ -0.44
PTPN11-204ENST00000531326 CRYBA4P53673 196 aa12.31□□□□□ -0.44
PTPN11-204ENST00000531326 LYZL1Q6UWQ5 148 aa12.31□□□□□ -0.44
PTPN11-204ENST00000531326 PRO0255Q9UI72 69 aa12.31□□□□□ -0.44
PTPN11-204ENST00000531326 HHLA3Q9XRX5 114 aa12.31□□□□□ -0.44
PTPN11-204ENST00000531326 A8MWL6 223 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 F2Z2F3 143 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 H3BNG1 76 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 CIDEAO60543 219 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 CRYGDP07320 174 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 GATA1P15976 413 aaPredicted RBP12.3□□□□□ -0.44
PTPN11-204ENST00000531326 SLAQ13239 276 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 SPANXN1Q5VSR9 72 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 ZFP2Q6ZN57 461 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 SPATA12Q7Z6I5 190 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 C15orf54Q8N8G6 183 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 OR10G8Q8NGN5 311 aa12.3□□□□□ -0.44
PTPN11-204ENST00000531326 SSTP61278 116 aa12.29□□□□□ -0.44
PTPN11-204ENST00000531326 Q6ZSN1 163 aa12.29□□□□□ -0.44
PTPN11-204ENST00000531326 TSKUQ8WUA8 353 aa12.29□□□□□ -0.44
PTPN11-204ENST00000531326 CNFNQ9BYD5 112 aa12.29□□□□□ -0.44
PTPN11-204ENST00000531326 A0A087WWL8 130 aa12.28□□□□□ -0.44
PTPN11-204ENST00000531326 PAX4O43316 350 aa12.28□□□□□ -0.44
PTPN11-204ENST00000531326 FOXA3P55318 350 aaPredicted RBP12.28□□□□□ -0.44
PTPN11-204ENST00000531326 CACNG7P62955 275 aa12.28□□□□□ -0.44
PTPN11-204ENST00000531326 ESRGQ1W209 222 aa12.28□□□□□ -0.44
PTPN11-204ENST00000531326 UPK3BQ9BT76 320 aa12.28□□□□□ -0.44
PTPN11-204ENST00000531326 MSRB1Q9NZV6 116 aa12.28□□□□□ -0.44
PTPN11-204ENST00000531326 KRTAP10-2P60368 255 aa12.27□□□□□ -0.45
PTPN11-204ENST00000531326 PNRC1Q12796 327 aaPredicted RBP12.27□□□□□ -0.45
PTPN11-204ENST00000531326 WDR73Q6P4I2 378 aa12.27□□□□□ -0.45
PTPN11-204ENST00000531326 Q8N1X5 172 aa12.27□□□□□ -0.45
PTPN11-204ENST00000531326 GFRA4Q9GZZ7 299 aa12.27□□□□□ -0.45
PTPN11-204ENST00000531326 A0A096LPF7 62 aa12.26□□□□□ -0.45
PTPN11-204ENST00000531326 FAM231BA6NCW3 169 aa12.26□□□□□ -0.45
PTPN11-204ENST00000531326 F8W036 122 aa12.26□□□□□ -0.45
PTPN11-204ENST00000531326 RHODO00212 210 aa12.26□□□□□ -0.45
PTPN11-204ENST00000531326 TTC32Q5I0X7 151 aa12.26□□□□□ -0.45
PTPN11-204ENST00000531326 FAM74A4Q5TZK3 123 aa12.26□□□□□ -0.45
PTPN11-204ENST00000531326 SLC25A29Q8N8R3 303 aa12.26□□□□□ -0.45
PTPN11-204ENST00000531326 PGLYRP4Q96LB8 373 aa12.26□□□□□ -0.45
PTPN11-204ENST00000531326 KIF25-AS1Q9Y6Z4 181 aa12.26□□□□□ -0.45
PTPN11-204ENST00000531326 TRBV6-4A0A1B0GX49 114 aa12.25□□□□□ -0.45
PTPN11-204ENST00000531326 HIGD1CA8MV81 97 aa12.25□□□□□ -0.45
PTPN11-204ENST00000531326 NTF3P20783 257 aa12.25□□□□□ -0.45
PTPN11-204ENST00000531326 C14orf178Q8N769 122 aaPredicted RBP12.25□□□□□ -0.45
PTPN11-204ENST00000531326 SEC11CQ9BY50 192 aa12.25□□□□□ -0.45
PTPN11-204ENST00000531326 MRPS16Q9Y3D3 137 aaKnown RBP12.25□□□□□ -0.45
PTPN11-204ENST00000531326 LOC100131303A0A0U1RQF7 123 aa12.24□□□□□ -0.45
PTPN11-204ENST00000531326 GYPEP15421 78 aa12.24□□□□□ -0.45
PTPN11-204ENST00000531326 LINC00315P59091 139 aa12.24□□□□□ -0.45
PTPN11-204ENST00000531326 AP1S3Q96PC3 154 aa12.24□□□□□ -0.45
PTPN11-204ENST00000531326 SMIM27A0A1W2PRY6 76 aa12.23□□□□□ -0.45
PTPN11-204ENST00000531326 K7EQD1 137 aa12.23□□□□□ -0.45
PTPN11-204ENST00000531326 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
PTPN11-204ENST00000531326 RHOHQ15669 191 aa12.23□□□□□ -0.45
PTPN11-204ENST00000531326 C10orf91Q5T1B1 145 aa12.23□□□□□ -0.45
PTPN11-204ENST00000531326 NUP35Q8NFH5 326 aa12.23□□□□□ -0.45
PTPN11-204ENST00000531326 ICOSQ9Y6W8 199 aa12.23□□□□□ -0.45
PTPN11-204ENST00000531326 EVI2AP22794 236 aa12.22□□□□□ -0.45
PTPN11-204ENST00000531326 TWIST1Q15672 202 aa12.22□□□□□ -0.45
PTPN11-204ENST00000531326 TRGC1P0CF51 173 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms