RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 NIT1Q86X76 327 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 C10orf67Q8IYJ2 551 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 CYB561D1Q8N8Q1 229 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 UBE2WQ96B02 151 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 SCGB3A2Q96PL1 93 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 CAMK2N2Q96S95 79 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 RAB26Q9ULW5 256 aa3.88□□□□□ -1.79
SVIP-204ENST00000530199 S100A7P31151 101 aa3.87□□□□□ -1.79
SVIP-204ENST00000530199 GUK1Q16774 197 aa3.87□□□□□ -1.79
SVIP-204ENST00000530199 NTM-AS1Q6ZSK4 140 aa3.87□□□□□ -1.79
SVIP-204ENST00000530199 SELENOHQ8IZQ5 122 aaKnown RBP3.87□□□□□ -1.79
SVIP-204ENST00000530199 TMEM75Q8N9X5 138 aa3.87□□□□□ -1.79
SVIP-204ENST00000530199 KRTAP4-1Q9BYQ7 146 aa3.87□□□□□ -1.79
SVIP-204ENST00000530199 TMEM222Q9H0R3 208 aa3.87□□□□□ -1.79
SVIP-204ENST00000530199 DIABLOQ9NR28 239 aa3.87□□□□□ -1.79
SVIP-204ENST00000530199 KLK12Q9UKR0 248 aa3.87□□□□□ -1.79
SVIP-204ENST00000530199 SMIM26A0A096LP01 95 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 MUC21A0A0G2JKD1 596 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 GPR31O00270 319 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 IGKV1-5P01602 117 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 RPL7P18124 248 aaKnown RBP3.86□□□□□ -1.79
SVIP-204ENST00000530199 MYL9P24844 172 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 TAS2R20P59543 309 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 GNG2P59768 71 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 SPCS3P61009 180 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 SYCNQ0VAF6 134 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 ELOBQ15370 118 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 TRGV9Q99603 122 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 CHCHD7Q9BUK0 85 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 CCDC90BQ9GZT6 254 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 VCXQ9H320 206 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 C8orf4Q9NR00 106 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 ORC6Q9Y5N6 252 aa3.86□□□□□ -1.79
SVIP-204ENST00000530199 A0A087WWC5 75 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.85□□□□□ -1.79
SVIP-204ENST00000530199 TRAV1-1A0A0B4J248 108 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 TRBV6-4A0A1B0GX49 114 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 CRYM-AS1A6NIL9 109 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 TCRBP04435 133 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 CXCL2P19875 107 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 TAS2R46P59540 309 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 RPL23P62829 140 aaKnown RBP3.85□□□□□ -1.79
SVIP-204ENST00000530199 RHOHQ15669 191 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 NMSQ5H8A3 153 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 SLC25A29Q8N8R3 303 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 PRADC1Q9BSG0 188 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 NDFIP1Q9BT67 221 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 SAMD10Q9BYL1 202 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 ATG5Q9H1Y0 275 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 URGCP-MRPS24S4R325 110 aa3.85□□□□□ -1.79
SVIP-204ENST00000530199 H3BRN7 92 aa3.84□□□□□ -1.79
SVIP-204ENST00000530199 ARL6IP5O75915 188 aa3.84□□□□□ -1.79
SVIP-204ENST00000530199 POLR2GP62487 172 aaKnown RBP eCLIP3.84□□□□□ -1.79
SVIP-204ENST00000530199 KRTAP19-2Q3LHN2 52 aa3.84□□□□□ -1.79
SVIP-204ENST00000530199 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
SVIP-204ENST00000530199 ASB16-AS1Q495Z4 193 aa3.84□□□□□ -1.79
SVIP-204ENST00000530199 SMUG1Q53HV7 270 aa3.84□□□□□ -1.79
SVIP-204ENST00000530199 FAM19A4Q96LR4 140 aa3.84□□□□□ -1.79
SVIP-204ENST00000530199 VCX3BQ9H321 246 aa3.84□□□□□ -1.79
SVIP-204ENST00000530199 POMPQ9Y244 141 aa3.84□□□□□ -1.79
SVIP-204ENST00000530199 LOC100130705A0A1B0GUX0 176 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 IFITM5A6NNB3 132 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 GABARAPH6UMI1 98 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 IFNA7P01567 189 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 HLA-DQA1P01909 254 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 NMBP08949 121 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 S100GP29377 79 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 AKR1C2P52895 323 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 BTN1A1Q13410 526 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 ENHOQ6UWT2 76 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 TMEM91Q6ZNR0 172 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 Q6ZQT7 251 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 LGI3Q8N145 548 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 FER1L6-AS1Q8NA97 138 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 DIRC1Q969H9 104 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 LINC00167Q96N53 147 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 SDHCQ99643 169 aaPredicted RBP3.83□□□□□ -1.8
SVIP-204ENST00000530199 SLC50A1Q9BRV3 221 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 ZNF2Q9BSG1 426 aaPredicted RBP3.83□□□□□ -1.8
SVIP-204ENST00000530199 SHANK2-AS3Q9BTD1 123 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 TMEM147Q9BVK8 224 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 FXYD6Q9H0Q3 95 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 SSR3Q9UNL2 185 aa3.83□□□□□ -1.8
SVIP-204ENST00000530199 BPY2O14599 106 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 MYL12BO14950 172 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 MED6O75586 246 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 APCSP02743 223 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 LINC00694P0DN24 101 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 ORM2P19652 201 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 TSPAN5P62079 268 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 RAB31Q13636 194 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 LPCAT3Q6P1A2 487 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 LCN15Q6UWW0 184 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 WFDC1Q9HC57 220 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 AP4S1Q9Y587 144 aa3.82□□□□□ -1.8
SVIP-204ENST00000530199 NEBP20929 6669 aa3.81□□□□□ -1.8
SVIP-204ENST00000530199 TMEM223A0PJW6 202 aa3.81□□□□□ -1.8
SVIP-204ENST00000530199 PGPA6NDG6 321 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms