RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PIFOQ8TCI5 191 aa13.8□□□□□ -0.2
LTBP3-210ENST00000528516 USP24Q9UPU5 2620 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 CTSGP08311 255 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 MORN3Q6PF18 240 aaPredicted RBP13.79□□□□□ -0.2
LTBP3-210ENST00000528516 ANKRD29Q8N6D5 301 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 KALRNO60229 2985 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 GAGE12JA6NER3 117 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 GAGE7O76087 117 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 GAGE12FP0CL80 117 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 GAGE12GP0CL81 117 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 GAGE12IP0CL82 117 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 GAGE4Q13068 117 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 RNF185Q96GF1 192 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 ZMAT4Q9H898 229 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 IGHV7-81A0A0B4J1V7 117 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 TRBV6-1A0A0K0K1D8 114 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 TSPAN13O95857 204 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 SHISA2Q6UWI4 295 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 KLHL30-AS1Q8NEE0 82 aa13.79□□□□□ -0.2
LTBP3-210ENST00000528516 SMCPP49901 116 aaPredicted RBP13.78□□□□□ -0.2
LTBP3-210ENST00000528516 PDE6HQ13956 83 aa13.78□□□□□ -0.2
LTBP3-210ENST00000528516 ZZEF1O43149 2961 aa13.78□□□□□ -0.2
LTBP3-210ENST00000528516 TRBV7-3A0A075B6L6 115 aa13.78□□□□□ -0.2
LTBP3-210ENST00000528516 LGALS1P09382 135 aaKnown RBP13.77□□□□□ -0.2
LTBP3-210ENST00000528516 UBE2E1P51965 193 aa13.77□□□□□ -0.2
LTBP3-210ENST00000528516 TRBV7-9A0A0J9YWB2 115 aa13.77□□□□□ -0.21
LTBP3-210ENST00000528516 RNF223E7ERA6 249 aa13.77□□□□□ -0.21
LTBP3-210ENST00000528516 FHL3Q13643 280 aa13.77□□□□□ -0.21
LTBP3-210ENST00000528516 MSRB2Q9Y3D2 182 aa13.77□□□□□ -0.21
LTBP3-210ENST00000528516 OR11H6Q8NGC7 330 aa13.77□□□□□ -0.21
LTBP3-210ENST00000528516 SPXQ9BT56 116 aa13.77□□□□□ -0.21
LTBP3-210ENST00000528516 ADARB2-AS1A8MUL3 147 aa13.76□□□□□ -0.21
LTBP3-210ENST00000528516 HIST2H2BDQ6DRA6 164 aa13.76□□□□□ -0.21
LTBP3-210ENST00000528516 C2orf66Q6UXQ4 117 aa13.76□□□□□ -0.21
LTBP3-210ENST00000528516 HOXB4P17483 251 aaPredicted RBP13.76□□□□□ -0.21
LTBP3-210ENST00000528516 TCL1BO95988 128 aa13.76□□□□□ -0.21
LTBP3-210ENST00000528516 ORMDL2Q53FV1 153 aa13.76□□□□□ -0.21
LTBP3-210ENST00000528516 C19orf54Q5BKX5 351 aa13.75□□□□□ -0.21
LTBP3-210ENST00000528516 DEFB136Q30KP8 78 aa13.75□□□□□ -0.21
LTBP3-210ENST00000528516 C9orf139Q6ZV77 190 aa13.75□□□□□ -0.21
LTBP3-210ENST00000528516 C3orf56Q8N813 242 aa13.75□□□□□ -0.21
LTBP3-210ENST00000528516 DPH3P1Q9H4G8 78 aa13.75□□□□□ -0.21
LTBP3-210ENST00000528516 PPP1R17O96001 155 aa13.75□□□□□ -0.21
LTBP3-210ENST00000528516 CD28P10747 220 aa13.75□□□□□ -0.21
LTBP3-210ENST00000528516 TRBV7-1A0A0A6YYK4 115 aa13.74□□□□□ -0.21
LTBP3-210ENST00000528516 IGHV3-38A0A0C4DH36 116 aa13.74□□□□□ -0.21
LTBP3-210ENST00000528516 DEFB131AP59861 70 aa13.74□□□□□ -0.21
LTBP3-210ENST00000528516 RPL39LQ96EH5 51 aaKnown RBP13.74□□□□□ -0.21
LTBP3-210ENST00000528516 CARD19Q96LW7 228 aa13.74□□□□□ -0.21
LTBP3-210ENST00000528516 COL27A1Q8IZC6 1860 aaPredicted RBP13.74□□□□□ -0.21
LTBP3-210ENST00000528516 IGHV4-38-2P0DP08 117 aa13.74□□□□□ -0.21
LTBP3-210ENST00000528516 FAM110DQ8TAY7 271 aaPredicted RBP13.74□□□□□ -0.21
LTBP3-210ENST00000528516 PLEKHB2Q96CS7 222 aa13.74□□□□□ -0.21
LTBP3-210ENST00000528516 ZFHX4Q86UP3 3567 aa13.74□□□□□ -0.21
LTBP3-210ENST00000528516 TRGV2A0A075B6R0 118 aa13.74□□□□□ -0.21
LTBP3-210ENST00000528516 OVOL1O14753 267 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 SLC25A20O43772 301 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 IGLC6P0CF74 106 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 IFITM1P13164 125 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 HTN3P15516 51 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 OR13C6PQ8NH95 151 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 FANCD2OSQ96PS1 177 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 TP53TG1Q9Y2A0 90 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 IGHV4-61A0A0C4DH41 118 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 ANKRD17O75179 2603 aaKnown RBP13.73□□□□□ -0.21
LTBP3-210ENST00000528516 CCDC179H3BU77 68 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 UBE2L6O14933 153 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 TRBV12-3P01733 135 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 DCHS1Q96JQ0 3298 aa13.73□□□□□ -0.21
LTBP3-210ENST00000528516 PRB1P04280 392 aa13.72□□□□□ -0.21
LTBP3-210ENST00000528516 CDSNQ15517 529 aa13.72□□□□□ -0.21
LTBP3-210ENST00000528516 XCL2Q9UBD3 114 aa13.72□□□□□ -0.21
LTBP3-210ENST00000528516 COX6CP09669 75 aa13.72□□□□□ -0.21
LTBP3-210ENST00000528516 ADORA2A-AS1P86434 159 aa13.72□□□□□ -0.21
LTBP3-210ENST00000528516 LINC00574Q9H8X3 128 aa13.72□□□□□ -0.21
LTBP3-210ENST00000528516 DAZ1Q9NQZ3 744 aaKnown RBP13.72□□□□□ -0.21
LTBP3-210ENST00000528516 OOSP1A8MZH6 123 aa13.71□□□□□ -0.21
LTBP3-210ENST00000528516 NTN5Q8WTR8 489 aaPredicted RBP13.71□□□□□ -0.21
LTBP3-210ENST00000528516 C11orf68Q9H3H3 251 aaKnown RBP13.71□□□□□ -0.21
LTBP3-210ENST00000528516 IGHV1-69DA0A0B4J2H0 117 aa13.71□□□□□ -0.21
LTBP3-210ENST00000528516 IGHV1-69P01742 117 aa13.71□□□□□ -0.21
LTBP3-210ENST00000528516 NDUFV3P56181 108 aaKnown RBP13.71□□□□□ -0.21
LTBP3-210ENST00000528516 IGLV11-55A0A075B6I3 123 aa13.71□□□□□ -0.22
LTBP3-210ENST00000528516 Q8N9W7 124 aa13.71□□□□□ -0.22
LTBP3-210ENST00000528516 IGF1P05019 195 aa13.7□□□□□ -0.22
LTBP3-210ENST00000528516 CFHR3Q02985 330 aa13.7□□□□□ -0.22
LTBP3-210ENST00000528516 TRAV8-4A0A0B4J246 113 aa13.7□□□□□ -0.22
LTBP3-210ENST00000528516 B4DSR2 109 aa13.7□□□□□ -0.22
LTBP3-210ENST00000528516 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
LTBP3-210ENST00000528516 TRAV4A0A0B4J268 109 aa13.69□□□□□ -0.22
LTBP3-210ENST00000528516 IGF2-ASQ6U949 168 aa13.69□□□□□ -0.22
LTBP3-210ENST00000528516 TACC2O95359 2948 aa13.69□□□□□ -0.22
LTBP3-210ENST00000528516 RPL32P62910 135 aaKnown RBP13.69□□□□□ -0.22
LTBP3-210ENST00000528516 UNQ9165/PRO28630Q6UXU0 137 aa13.69□□□□□ -0.22
LTBP3-210ENST00000528516 SMIM2Q9BVW6 85 aa13.69□□□□□ -0.22
LTBP3-210ENST00000528516 TRAV13-1A0A0B4J241 112 aa13.69□□□□□ -0.22
LTBP3-210ENST00000528516 SDHAF1A6NFY7 115 aa13.69□□□□□ -0.22
LTBP3-210ENST00000528516 MSMBP08118 114 aa13.69□□□□□ -0.22
LTBP3-210ENST00000528516 TRPT1Q86TN4 253 aaKnown RBP13.69□□□□□ -0.22
LTBP3-210ENST00000528516 JPT2Q9H910 190 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms