RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 NXPH4O95158 308 aa9.73□□□□□ -0.85
CAPN1-212ENST00000527887 CT83Q5H943 113 aa9.73□□□□□ -0.85
CAPN1-212ENST00000527887 SPATA12Q7Z6I5 190 aa9.73□□□□□ -0.85
CAPN1-212ENST00000527887 NFE4Q86UQ8 179 aa9.73□□□□□ -0.85
CAPN1-212ENST00000527887 NDFIP1Q9BT67 221 aa9.73□□□□□ -0.85
CAPN1-212ENST00000527887 RPH3ALQ9UNE2 315 aa9.73□□□□□ -0.85
CAPN1-212ENST00000527887 TRBV24-1A0A075B6N3 115 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 TRAV4A0A0B4J268 109 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 PGPEP1LA6NFU8 196 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 M0R2P5 195 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 CIDEAO60543 219 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 PFN1P07737 140 aaKnown RBP9.72□□□□□ -0.85
CAPN1-212ENST00000527887 S100PP25815 95 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 SRIP30626 198 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 LINC00315P59091 139 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 ERVFC1-1P60608 527 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 SH2D6Q7Z4S9 175 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 PRNTQ86SH4 94 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 CBLN2Q8IUK8 224 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 YPEL4Q96NS1 127 aa9.72□□□□□ -0.85
CAPN1-212ENST00000527887 HSPG2P98160 4391 aa9.71□□□□□ -0.85
CAPN1-212ENST00000527887 IGHV3-16A0A0C4DH30 117 aa9.71□□□□□ -0.86
CAPN1-212ENST00000527887 C19orf71A6NCJ1 209 aa9.71□□□□□ -0.86
CAPN1-212ENST00000527887 FAM231BA6NCW3 169 aa9.71□□□□□ -0.86
CAPN1-212ENST00000527887 MGST1P10620 155 aaKnown RBP9.71□□□□□ -0.86
CAPN1-212ENST00000527887 KCNIP4Q6PIL6 250 aa9.71□□□□□ -0.86
CAPN1-212ENST00000527887 OR4C5Q8NGB2 326 aa9.71□□□□□ -0.86
CAPN1-212ENST00000527887 ZNF479Q96JC4 524 aa9.71□□□□□ -0.86
CAPN1-212ENST00000527887 NAGKQ9UJ70 344 aa9.71□□□□□ -0.86
CAPN1-212ENST00000527887 TRAV8-1A0A0A6YYK1 113 aa9.7□□□□□ -0.86
CAPN1-212ENST00000527887 COLCA2A8K830 154 aa9.7□□□□□ -0.86
CAPN1-212ENST00000527887 K7EQD1 137 aa9.7□□□□□ -0.86
CAPN1-212ENST00000527887 EREGO14944 169 aa9.7□□□□□ -0.86
CAPN1-212ENST00000527887 RPL19P84098 196 aaKnown RBP9.7□□□□□ -0.86
CAPN1-212ENST00000527887 Q6ZRN7 208 aaPredicted RBP9.7□□□□□ -0.86
CAPN1-212ENST00000527887 DAZAP1Q96EP5 407 aaKnown RBP9.7□□□□□ -0.86
CAPN1-212ENST00000527887 PGPEP1Q9NXJ5 209 aa9.7□□□□□ -0.86
CAPN1-212ENST00000527887 IL36BQ9NZH7 164 aa9.7□□□□□ -0.86
CAPN1-212ENST00000527887 V9GYV3 84 aa9.7□□□□□ -0.86
CAPN1-212ENST00000527887 GNRH2O43555 120 aa9.69□□□□□ -0.86
CAPN1-212ENST00000527887 GYPEP15421 78 aa9.69□□□□□ -0.86
CAPN1-212ENST00000527887 ELOBQ15370 118 aa9.69□□□□□ -0.86
CAPN1-212ENST00000527887 SMUG1Q53HV7 270 aa9.69□□□□□ -0.86
CAPN1-212ENST00000527887 NUDT10Q8NFP7 164 aa9.69□□□□□ -0.86
CAPN1-212ENST00000527887 NUDT11Q96G61 164 aa9.69□□□□□ -0.86
CAPN1-212ENST00000527887 A8MWL6 223 aa9.68□□□□□ -0.86
CAPN1-212ENST00000527887 GATCO43716 136 aaKnown RBP9.68□□□□□ -0.86
CAPN1-212ENST00000527887 P01737 135 aa9.68□□□□□ -0.86
CAPN1-212ENST00000527887 TYMSP04818 313 aa9.68□□□□□ -0.86
CAPN1-212ENST00000527887 EVI2AP22794 236 aa9.68□□□□□ -0.86
CAPN1-212ENST00000527887 TIRAPP58753 221 aa9.68□□□□□ -0.86
CAPN1-212ENST00000527887 FAM162BQ5T6X4 162 aa9.68□□□□□ -0.86
CAPN1-212ENST00000527887 GFRA4Q9GZZ7 299 aa9.68□□□□□ -0.86
CAPN1-212ENST00000527887 ABCA13Q86UQ4 5058 aa9.68□□□□□ -0.86
CAPN1-212ENST00000527887 SMIM27A0A1W2PRY6 76 aa9.67□□□□□ -0.86
CAPN1-212ENST00000527887 FABP5P3A8MUU1 101 aa9.67□□□□□ -0.86
CAPN1-212ENST00000527887 C10orf126Q8N4M7 172 aa9.67□□□□□ -0.86
CAPN1-212ENST00000527887 TSKUQ8WUA8 353 aa9.67□□□□□ -0.86
CAPN1-212ENST00000527887 PTH2Q96A98 100 aa9.67□□□□□ -0.86
CAPN1-212ENST00000527887 ZC2HC1AQ96GY0 325 aa9.67□□□□□ -0.86
CAPN1-212ENST00000527887 SGK494Q96LW2 274 aa9.67□□□□□ -0.86
CAPN1-212ENST00000527887 RNASE7Q9H1E1 156 aaKnown RBP9.67□□□□□ -0.86
CAPN1-212ENST00000527887 RPP21Q9H633 154 aaKnown RBP9.67□□□□□ -0.86
CAPN1-212ENST00000527887 XKRY2A2RUG3 117 aa9.66□□□□□ -0.86
CAPN1-212ENST00000527887 DNAH10OSP0CZ25 163 aa9.66□□□□□ -0.86
CAPN1-212ENST00000527887 FOXA3P55318 350 aaPredicted RBP9.66□□□□□ -0.86
CAPN1-212ENST00000527887 KRTAP10-2P60368 255 aa9.66□□□□□ -0.86
CAPN1-212ENST00000527887 RPS20P60866 119 aaKnown RBP9.66□□□□□ -0.86
CAPN1-212ENST00000527887 COX19Q49B96 90 aa9.66□□□□□ -0.86
CAPN1-212ENST00000527887 CDPF1Q6NVV7 123 aa9.66□□□□□ -0.86
CAPN1-212ENST00000527887 NHLRC2Q8NBF2 726 aa9.66□□□□□ -0.86
CAPN1-212ENST00000527887 APOBP04114 4563 aaKnown RBP9.65□□□□□ -0.86
CAPN1-212ENST00000527887 GATA1P15976 413 aaPredicted RBP9.65□□□□□ -0.86
CAPN1-212ENST00000527887 RAB5AP20339 215 aa9.65□□□□□ -0.86
CAPN1-212ENST00000527887 CRIP1P50238 77 aa9.65□□□□□ -0.86
CAPN1-212ENST00000527887 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
CAPN1-212ENST00000527887 RASL11AQ6T310 242 aa9.65□□□□□ -0.86
CAPN1-212ENST00000527887 MAPKAPK5-AS1Q8N8E1 139 aa9.65□□□□□ -0.86
CAPN1-212ENST00000527887 TRBV6-4A0A1B0GX49 114 aa9.64□□□□□ -0.87
CAPN1-212ENST00000527887 CXCL1P09341 107 aa9.64□□□□□ -0.87
CAPN1-212ENST00000527887 PIK3CD-AS1Q5SR53 167 aa9.64□□□□□ -0.87
CAPN1-212ENST00000527887 PRR27Q6MZM9 219 aa9.64□□□□□ -0.87
CAPN1-212ENST00000527887 PRADC1Q9BSG0 188 aa9.64□□□□□ -0.87
CAPN1-212ENST00000527887 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
CAPN1-212ENST00000527887 NAT8BQ9UHF3 227 aa9.64□□□□□ -0.87
CAPN1-212ENST00000527887 RS1O15537 224 aa9.63□□□□□ -0.87
CAPN1-212ENST00000527887 ZNF80P51504 273 aaPredicted RBP9.63□□□□□ -0.87
CAPN1-212ENST00000527887 RHOHQ15669 191 aa9.63□□□□□ -0.87
CAPN1-212ENST00000527887 ATP5L2Q7Z4Y8 100 aa9.63□□□□□ -0.87
CAPN1-212ENST00000527887 WFDC10BQ8IUB3 73 aa9.63□□□□□ -0.87
CAPN1-212ENST00000527887 Q8N1X5 172 aa9.63□□□□□ -0.87
CAPN1-212ENST00000527887 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
CAPN1-212ENST00000527887 URGCP-MRPS24S4R325 110 aa9.63□□□□□ -0.87
CAPN1-212ENST00000527887 SH2D1AO60880 128 aa9.62□□□□□ -0.87
CAPN1-212ENST00000527887 CRYGDP07320 174 aa9.62□□□□□ -0.87
CAPN1-212ENST00000527887 LINC01559Q495D7 138 aa9.62□□□□□ -0.87
CAPN1-212ENST00000527887 CFAP126Q5VTH2 177 aa9.62□□□□□ -0.87
CAPN1-212ENST00000527887 OR2D3Q8NGH3 330 aa9.62□□□□□ -0.87
CAPN1-212ENST00000527887 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
CAPN1-212ENST00000527887 C11orf21Q9P2W6 132 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms