RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 FOXA3P55318 350 aaPredicted RBP11.57□□□□□ -0.56
SMCO4-204ENST00000527149 SLAQ13239 276 aa11.57□□□□□ -0.56
SMCO4-204ENST00000527149 SPANXN1Q5VSR9 72 aa11.57□□□□□ -0.56
SMCO4-204ENST00000527149 TSKUQ8WUA8 353 aa11.57□□□□□ -0.56
SMCO4-204ENST00000527149 MSRB1Q9NZV6 116 aa11.57□□□□□ -0.56
SMCO4-204ENST00000527149 A0A087WWL8 130 aa11.56□□□□□ -0.56
SMCO4-204ENST00000527149 A0A096LPF7 62 aa11.56□□□□□ -0.56
SMCO4-204ENST00000527149 RHODO00212 210 aa11.56□□□□□ -0.56
SMCO4-204ENST00000527149 PAX4O43316 350 aa11.56□□□□□ -0.56
SMCO4-204ENST00000527149 CACNG7P62955 275 aa11.56□□□□□ -0.56
SMCO4-204ENST00000527149 C15orf54Q8N8G6 183 aa11.56□□□□□ -0.56
SMCO4-204ENST00000527149 SLC25A29Q8N8R3 303 aa11.56□□□□□ -0.56
SMCO4-204ENST00000527149 OR10G8Q8NGN5 311 aa11.56□□□□□ -0.56
SMCO4-204ENST00000527149 GFRA4Q9GZZ7 299 aa11.56□□□□□ -0.56
SMCO4-204ENST00000527149 KIF25-AS1Q9Y6Z4 181 aa11.56□□□□□ -0.56
SMCO4-204ENST00000527149 DNAH2Q9P225 4427 aa11.55□□□□□ -0.56
SMCO4-204ENST00000527149 TRBV6-4A0A1B0GX49 114 aa11.55□□□□□ -0.56
SMCO4-204ENST00000527149 FAM231BA6NCW3 169 aa11.55□□□□□ -0.56
SMCO4-204ENST00000527149 LINC00315P59091 139 aa11.55□□□□□ -0.56
SMCO4-204ENST00000527149 PNRC1Q12796 327 aaPredicted RBP11.55□□□□□ -0.56
SMCO4-204ENST00000527149 LGALS9CQ6DKI2 356 aa11.55□□□□□ -0.56
SMCO4-204ENST00000527149 WDR73Q6P4I2 378 aa11.55□□□□□ -0.56
SMCO4-204ENST00000527149 AP1S3Q96PC3 154 aa11.55□□□□□ -0.56
SMCO4-204ENST00000527149 LOC100131303A0A0U1RQF7 123 aa11.54□□□□□ -0.56
SMCO4-204ENST00000527149 NUDT3O95989 172 aa11.54□□□□□ -0.56
SMCO4-204ENST00000527149 SSTP61278 116 aa11.54□□□□□ -0.56
SMCO4-204ENST00000527149 FAM74A4Q5TZK3 123 aa11.54□□□□□ -0.56
SMCO4-204ENST00000527149 HIGD1CA8MV81 97 aa11.53□□□□□ -0.56
SMCO4-204ENST00000527149 K7EQD1 137 aa11.53□□□□□ -0.56
SMCO4-204ENST00000527149 LINC00694P0DN24 101 aa11.53□□□□□ -0.56
SMCO4-204ENST00000527149 NTF3P20783 257 aa11.53□□□□□ -0.56
SMCO4-204ENST00000527149 C10orf91Q5T1B1 145 aa11.53□□□□□ -0.56
SMCO4-204ENST00000527149 C14orf178Q8N769 122 aaPredicted RBP11.53□□□□□ -0.56
SMCO4-204ENST00000527149 SEC11CQ9BY50 192 aa11.53□□□□□ -0.56
SMCO4-204ENST00000527149 Q9UF83 564 aa11.53□□□□□ -0.56
SMCO4-204ENST00000527149 DNAH10Q8IVF4 4471 aa11.53□□□□□ -0.56
SMCO4-204ENST00000527149 SMIM27A0A1W2PRY6 76 aa11.52□□□□□ -0.57
SMCO4-204ENST00000527149 F8W036 122 aa11.52□□□□□ -0.57
SMCO4-204ENST00000527149 GYPEP15421 78 aa11.52□□□□□ -0.57
SMCO4-204ENST00000527149 RHOHQ15669 191 aa11.52□□□□□ -0.57
SMCO4-204ENST00000527149 PGLYRP4Q96LB8 373 aa11.52□□□□□ -0.57
SMCO4-204ENST00000527149 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.57
SMCO4-204ENST00000527149 P0DMU3 169 aa11.51□□□□□ -0.57
SMCO4-204ENST00000527149 FAM231AP0DMU4 169 aa11.51□□□□□ -0.57
SMCO4-204ENST00000527149 FAM231CP0DMU5 169 aa11.51□□□□□ -0.57
SMCO4-204ENST00000527149 RNF212Q495C1 297 aa11.51□□□□□ -0.57
SMCO4-204ENST00000527149 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
SMCO4-204ENST00000527149 EVI2AP22794 236 aa11.5□□□□□ -0.57
SMCO4-204ENST00000527149 MRPL23Q16540 153 aaKnown RBP11.5□□□□□ -0.57
SMCO4-204ENST00000527149 CARHSP1Q9Y2V2 147 aaKnown RBP11.5□□□□□ -0.57
SMCO4-204ENST00000527149 LY6G6CO95867 125 aa11.49□□□□□ -0.57
SMCO4-204ENST00000527149 TRGC1P0CF51 173 aa11.49□□□□□ -0.57
SMCO4-204ENST00000527149 RAB4BP61018 213 aa11.49□□□□□ -0.57
SMCO4-204ENST00000527149 TWIST1Q15672 202 aa11.49□□□□□ -0.57
SMCO4-204ENST00000527149 PRADC1Q9BSG0 188 aa11.49□□□□□ -0.57
SMCO4-204ENST00000527149 NAT8BQ9UHF3 227 aa11.49□□□□□ -0.57
SMCO4-204ENST00000527149 LINC00588Q9Y4M8 146 aa11.49□□□□□ -0.57
SMCO4-204ENST00000527149 A0A1B0GUT8 65 aa11.48□□□□□ -0.57
SMCO4-204ENST00000527149 ZNF56Q15929 161 aa11.48□□□□□ -0.57
SMCO4-204ENST00000527149 ESRGQ1W209 222 aa11.48□□□□□ -0.57
SMCO4-204ENST00000527149 PPP1R2P9O14990 202 aa11.47□□□□□ -0.57
SMCO4-204ENST00000527149 SRIP30626 198 aa11.47□□□□□ -0.57
SMCO4-204ENST00000527149 DPH3P1Q9H4G8 78 aa11.47□□□□□ -0.57
SMCO4-204ENST00000527149 TRBV10-1A0A0K0K1A3 114 aa11.46□□□□□ -0.57
SMCO4-204ENST00000527149 MT-ND4LP03901 98 aa11.46□□□□□ -0.57
SMCO4-204ENST00000527149 SMIM17P0DL12 118 aa11.46□□□□□ -0.57
SMCO4-204ENST00000527149 SUMO4Q6EEV6 95 aa11.46□□□□□ -0.57
SMCO4-204ENST00000527149 NEGR1Q7Z3B1 354 aa11.46□□□□□ -0.57
SMCO4-204ENST00000527149 ANAPC16Q96DE5 110 aa11.46□□□□□ -0.57
SMCO4-204ENST00000527149 MGPP08493 103 aa11.45□□□□□ -0.58
SMCO4-204ENST00000527149 CCL18P55774 89 aa11.45□□□□□ -0.58
SMCO4-204ENST00000527149 LYPD5Q6UWN5 251 aa11.45□□□□□ -0.58
SMCO4-204ENST00000527149 MRPS16Q9Y3D3 137 aaKnown RBP11.45□□□□□ -0.58
SMCO4-204ENST00000527149 DNAH17Q9UFH2 4485 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 A0A1B0GXF2 115 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 GAGE12JA6NER3 117 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 M0QY20 66 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 FAM3BP58499 235 aaPredicted RBP11.44□□□□□ -0.58
SMCO4-204ENST00000527149 TIRAPP58753 221 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 GAGE1Q13065 139 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 GAGE4Q13068 117 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 GAGE5Q13069 117 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 GAGE13Q4V321 117 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 UBE2DNLQ8IWF7 75 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 NEXN-AS1Q8NBZ9 246 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 ZNRF2Q8NHG8 242 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 BORCS7Q96B45 105 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 UPK3BQ9BT76 320 aa11.44□□□□□ -0.58
SMCO4-204ENST00000527149 SH2D6Q7Z4S9 175 aa11.43□□□□□ -0.58
SMCO4-204ENST00000527149 TMEM191AQ9H0A3 160 aa11.43□□□□□ -0.58
SMCO4-204ENST00000527149 F5H697 171 aa11.42□□□□□ -0.58
SMCO4-204ENST00000527149 UBE2D3P61077 147 aa11.42□□□□□ -0.58
SMCO4-204ENST00000527149 UBE2D2P62837 147 aa11.42□□□□□ -0.58
SMCO4-204ENST00000527149 RIGQ13278 110 aa11.42□□□□□ -0.58
SMCO4-204ENST00000527149 FRAS1Q86XX4 4008 aa11.42□□□□□ -0.58
SMCO4-204ENST00000527149 SLC7A5P1Q8MH63 180 aa11.41□□□□□ -0.58
SMCO4-204ENST00000527149 GATD1Q8NB37 220 aa11.41□□□□□ -0.58
SMCO4-204ENST00000527149 CLRN3Q8NCR9 226 aa11.41□□□□□ -0.58
SMCO4-204ENST00000527149 ATP6V0E2Q8NHE4 81 aa11.41□□□□□ -0.58
SMCO4-204ENST00000527149 RNF185Q96GF1 192 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms