RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 C10orf82Q8WW14 230 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 BET1LQ9NYM9 111 aa2.6□□□□□ -1.99
CTR9-203ENST00000526874 EEA1Q15075 1411 aa2.59□□□□□ -1.99
CTR9-203ENST00000526874 IGKV2-28A0A075B6P5 120 aa2.59□□□□□ -1.99
CTR9-203ENST00000526874 SDHAF1A6NFY7 115 aa2.59□□□□□ -1.99
CTR9-203ENST00000526874 IGKV2D-28P01615 120 aa2.59□□□□□ -1.99
CTR9-203ENST00000526874 TDRG1Q3Y452 100 aa2.59□□□□□ -1.99
CTR9-203ENST00000526874 RPL7L1Q6DKI1 246 aaKnown RBP2.59□□□□□ -1.99
CTR9-203ENST00000526874 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
CTR9-203ENST00000526874 PMCHL2Q9BQD1 86 aa2.59□□□□□ -1.99
CTR9-203ENST00000526874 CFAP43Q8NDM7 1665 aa2.59□□□□□ -2
CTR9-203ENST00000526874 CHD3Q12873 2000 aaKnown RBP2.59□□□□□ -2
CTR9-203ENST00000526874 UTRNP46939 3433 aa2.59□□□□□ -2
CTR9-203ENST00000526874 ARAP2Q8WZ64 1704 aa2.59□□□□□ -2
CTR9-203ENST00000526874 LAMB2P55268 1798 aa2.59□□□□□ -2
CTR9-203ENST00000526874 RTEL1-TNFRSF6BF6WH68 1400 aa2.59□□□□□ -2
CTR9-203ENST00000526874 UGGT2Q9NYU1 1516 aa2.58□□□□□ -2
CTR9-203ENST00000526874 IQGAP2Q13576 1575 aa2.58□□□□□ -2
CTR9-203ENST00000526874 SHROOM2Q13796 1616 aa2.58□□□□□ -2
CTR9-203ENST00000526874 PCNTO95613 3336 aa2.58□□□□□ -2
CTR9-203ENST00000526874 F8W1H4 67 aa2.58□□□□□ -2
CTR9-203ENST00000526874 NUPR1O60356 82 aa2.58□□□□□ -2
CTR9-203ENST00000526874 NMBP08949 121 aa2.58□□□□□ -2
CTR9-203ENST00000526874 ELOBQ15370 118 aa2.58□□□□□ -2
CTR9-203ENST00000526874 LYPD5Q6UWN5 251 aa2.58□□□□□ -2
CTR9-203ENST00000526874 ZNF431Q8TF32 576 aaPredicted RBP2.58□□□□□ -2
CTR9-203ENST00000526874 PPDPFLQ8WWR9 84 aa2.58□□□□□ -2
CTR9-203ENST00000526874 PARP14Q460N5 1801 aa2.58□□□□□ -2
CTR9-203ENST00000526874 PTPRFP10586 1907 aa2.58□□□□□ -2
CTR9-203ENST00000526874 RAPGEF6Q8TEU7 1601 aa2.57□□□□□ -2
CTR9-203ENST00000526874 ZSWIM8A7E2V4 1837 aa2.57□□□□□ -2
CTR9-203ENST00000526874 A6NIN4 97 aa2.57□□□□□ -2
CTR9-203ENST00000526874 LINC00052Q96N35 136 aa2.57□□□□□ -2
CTR9-203ENST00000526874 LIMD2Q9BT23 127 aa2.57□□□□□ -2
CTR9-203ENST00000526874 MRPL35Q9NZE8 188 aaKnown RBP2.57□□□□□ -2
CTR9-203ENST00000526874 DAPK1P53355 1430 aa2.57□□□□□ -2
CTR9-203ENST00000526874 ATP10BO94823 1461 aa2.57□□□□□ -2
CTR9-203ENST00000526874 EPRSP07814 1512 aaKnown RBP2.57□□□□□ -2
CTR9-203ENST00000526874 ADCY10Q96PN6 1610 aa2.57□□□□□ -2
CTR9-203ENST00000526874 ADAMTS7Q9UKP4 1686 aa2.57□□□□□ -2
CTR9-203ENST00000526874 MYOFQ9NZM1 2061 aa2.56□□□□□ -2
CTR9-203ENST00000526874 TRBV6-8A0A0A6YYG3 113 aa2.56□□□□□ -2
CTR9-203ENST00000526874 TMEM30CPA0ZSE6 113 aa2.56□□□□□ -2
CTR9-203ENST00000526874 HCG22E2RYF7 251 aa2.56□□□□□ -2
CTR9-203ENST00000526874 K7EP34 96 aa2.56□□□□□ -2
CTR9-203ENST00000526874 CCL16O15467 120 aa2.56□□□□□ -2
CTR9-203ENST00000526874 IGLV6-57P01721 117 aa2.56□□□□□ -2
CTR9-203ENST00000526874 IGHV3-33P01772 117 aa2.56□□□□□ -2
CTR9-203ENST00000526874 PRB2P02812 416 aaPredicted RBP2.56□□□□□ -2
CTR9-203ENST00000526874 KRTAP10-8P60410 259 aa2.56□□□□□ -2
CTR9-203ENST00000526874 PRR9Q5T870 116 aa2.56□□□□□ -2
CTR9-203ENST00000526874 OR10AG1Q8NH19 301 aa2.56□□□□□ -2
CTR9-203ENST00000526874 FAM213BQ8TBF2 198 aa2.56□□□□□ -2
CTR9-203ENST00000526874 PATE1Q8WXA2 126 aa2.56□□□□□ -2
CTR9-203ENST00000526874 TSLPQ969D9 159 aa2.56□□□□□ -2
CTR9-203ENST00000526874 IFI27L1Q96BM0 104 aa2.56□□□□□ -2
CTR9-203ENST00000526874 C20orf78Q9BR46 151 aa2.56□□□□□ -2
CTR9-203ENST00000526874 MAP3K1Q13233 1512 aa2.56□□□□□ -2
CTR9-203ENST00000526874 KIAA0556O60303 1618 aa2.56□□□□□ -2
CTR9-203ENST00000526874 TOPAZ1Q8N9V7 1692 aa2.56□□□□□ -2
CTR9-203ENST00000526874 LAMB1P07942 1786 aa2.56□□□□□ -2
CTR9-203ENST00000526874 TRAV13-2A0A0B4J235 113 aa2.55□□□□□ -2
CTR9-203ENST00000526874 PXDNLA1KZ92 1463 aa2.55□□□□□ -2
CTR9-203ENST00000526874 CLIP1P30622 1438 aa2.55□□□□□ -2
CTR9-203ENST00000526874 GNG11P61952 73 aa2.55□□□□□ -2
CTR9-203ENST00000526874 PEA15Q15121 130 aa2.55□□□□□ -2
CTR9-203ENST00000526874 SBF2Q86WG5 1849 aa2.55□□□□□ -2
CTR9-203ENST00000526874 UNC13CQ8NB66 2214 aa2.55□□□□□ -2
CTR9-203ENST00000526874 LRRC7Q96NW7 1537 aa2.55□□□□□ -2
CTR9-203ENST00000526874 BRWD1Q9NSI6 2320 aa2.54□□□□□ -2
CTR9-203ENST00000526874 MYH8P13535 1937 aa2.54□□□□□ -2
CTR9-203ENST00000526874 CEP192Q8TEP8 1941 aa2.54□□□□□ -2
CTR9-203ENST00000526874 MARF1Q9Y4F3 1742 aaKnown RBP2.54□□□□□ -2
CTR9-203ENST00000526874 ABCC3O15438 1527 aa2.54□□□□□ -2
CTR9-203ENST00000526874 PIGBOS1A0A0B4J2F0 54 aa2.54□□□□□ -2
CTR9-203ENST00000526874 TRBV10-3A0A0K0K1G6 114 aa2.54□□□□□ -2
CTR9-203ENST00000526874 RNASE2P10153 161 aaKnown RBP2.54□□□□□ -2
CTR9-203ENST00000526874 ASIPP42127 132 aa2.54□□□□□ -2
CTR9-203ENST00000526874 ODF3Q96PU9 254 aa2.54□□□□□ -2
CTR9-203ENST00000526874 CYSTM1Q9H1C7 97 aa2.54□□□□□ -2
CTR9-203ENST00000526874 MPDZO75970 2070 aa2.54□□□□□ -2
CTR9-203ENST00000526874 COL4A2P08572 1712 aa2.54□□□□□ -2
CTR9-203ENST00000526874 MON2Q7Z3U7 1717 aa2.54□□□□□ -2
CTR9-203ENST00000526874 ABCA8O94911 1581 aa2.53□□□□□ -2
CTR9-203ENST00000526874 MAGI3Q5TCQ9 1506 aa2.53□□□□□ -2
CTR9-203ENST00000526874 MED12LQ86YW9 2145 aa2.53□□□□□ -2
CTR9-203ENST00000526874 TRAV12-3A0A0B4J271 114 aa2.53□□□□□ -2
CTR9-203ENST00000526874 FAUP35544 74 aaKnown RBP2.53□□□□□ -2
CTR9-203ENST00000526874 SEC11AP67812 179 aa2.53□□□□□ -2
CTR9-203ENST00000526874 C15orf53Q8NAA6 179 aa2.53□□□□□ -2
CTR9-203ENST00000526874 ORMDL1Q9P0S3 153 aa2.53□□□□□ -2
CTR9-203ENST00000526874 C22orf24Q9Y442 160 aa2.53□□□□□ -2
CTR9-203ENST00000526874 EP400Q96L91 3159 aa2.53□□□□□ -2
CTR9-203ENST00000526874 LTBP2Q14767 1821 aa2.53□□□□□ -2
CTR9-203ENST00000526874 PPRC1Q5VV67 1664 aaKnown RBP2.53□□□□□ -2
CTR9-203ENST00000526874 BAZ2BQ9UIF8 2168 aaKnown RBP2.53□□□□□ -2
CTR9-203ENST00000526874 GLI2P10070 1586 aa2.53□□□□□ -2.01
CTR9-203ENST00000526874 PRDM15P57071 1507 aaPredicted RBP2.52□□□□□ -2.01
CTR9-203ENST00000526874 CDK13Q14004 1512 aaKnown RBP2.52□□□□□ -2.01
CTR9-203ENST00000526874 FANCAO15360 1455 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms