RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 F8W036 122 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 K7EQD1 137 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 NXPH4O95158 308 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 GAS8-AS1O95177 125 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 CXCL1P09341 107 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 OR5AL1P0C617 328 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 MED14OSP0DP75 135 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 FAM3BP58499 235 aaPredicted RBP3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 RNF212Q495C1 297 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 FAM231DQ6ZW35 169 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 SLC7A5P1Q8MH63 180 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 C15orf54Q8N8G6 183 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 PTH2Q96A98 100 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 OSTCQ9NRP0 149 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 LY96Q9Y6Y9 160 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 TENM2Q9NT68 2774 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 A0A1W2PPQ1 181 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 F2Z2F3 143 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 SMKR1H3BMG3 65 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 NDUFS6O75380 124 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 SMIM17P0DL12 118 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 SRIP30626 198 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 CTRLP40313 264 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 CAMPP49913 170 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 LINC00315P59091 139 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 MRPL23Q16540 153 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 LGALS9CQ6DKI2 356 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 SUMO4Q6EEV6 95 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 MRPL54Q6P161 138 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 LYPD5Q6UWN5 251 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 NEGR1Q7Z3B1 354 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 WFDC10BQ8IUB3 73 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 Q8N3U1 123 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 C15orf53Q8NAA6 179 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 NUP35Q8NFH5 326 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 ZNRF2Q8NHG8 242 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 TSKUQ8WUA8 353 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 FAM210BQ96KR6 192 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 AP1S3Q96PC3 154 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 PRADC1Q9BSG0 188 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 SMDT1Q9H4I9 107 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 KIF25-AS1Q9Y6Z4 181 aa3.17□□□□□ -1.9
CHMP4A-202ENST00000524955 TRBV6-4A0A1B0GX49 114 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 SMIM27A0A1W2PRY6 76 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 H3BNG1 76 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 RHODO00212 210 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 NCR2O95944 276 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 CCL18P55774 89 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 TCTAP57738 103 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 CACNG7P62955 275 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 SLAQ13239 276 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 RHOHQ15669 191 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 CT83Q5H943 113 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 UQCC3Q6UW78 93 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 ZFP2Q6ZN57 461 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 AMN1Q8IY45 258 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 NEXN-AS1Q8NBZ9 246 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 ATP6V0E2Q8NHE4 81 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 BORCS7Q96B45 105 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 RPL39LQ96EH5 51 aaKnown RBP3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 TNFRSF18Q9Y5U5 241 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 STARD9Q9P2P6 4700 aa3.16□□□□□ -1.9
CHMP4A-202ENST00000524955 MUC4Q99102 2169 aa3.15□□□□□ -1.9
CHMP4A-202ENST00000524955 A0A1B0GUT8 65 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 M0QY20 66 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 IGHV3-30P01768 117 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 IGHV3-33P01772 117 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 APOC3P02656 99 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 MT-ND4LP03901 98 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 TRGC1P0CF51 173 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 IGHV3-30-3P0DP02 117 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 IGHV3-30-5P0DP03 117 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 RAB4BP61018 213 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 RPL36AP83881 106 aaKnown RBP3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 PIK3CD-AS1Q5SR53 167 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 GATD1Q8NB37 220 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 RPL36ALQ969Q0 106 aaKnown RBP3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 RNF185Q96GF1 192 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 SEC11CQ9BY50 192 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 KRTAP1-5Q9BYS1 174 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 DPH3P1Q9H4G8 78 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 Q9H8V8 135 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 RPS10P5Q9NQ39 176 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 NAT8BQ9UHF3 227 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 MRPS16Q9Y3D3 137 aaKnown RBP3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 URGCP-MRPS24S4R325 110 aa3.15□□□□□ -1.91
CHMP4A-202ENST00000524955 C7orf77A4D0Y5 90 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 CIDEAO60543 219 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 LINC00694P0DN24 101 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 RAB4AP20338 218 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 RPS10P46783 165 aaKnown RBP3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 UBE2D3P61077 147 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 UBE2D2P62837 147 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 PNRC1Q12796 327 aaPredicted RBP3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 RIGQ13278 110 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 OR10J3Q5JRS4 329 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 WDR73Q6P4I2 378 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 RASL11AQ6T310 242 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 ATRAIDQ6UW56 229 aa3.14□□□□□ -1.91
CHMP4A-202ENST00000524955 NTM-AS1Q6ZSK4 140 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms