RNA–Protein interactions for RNA: ENST00000524846.5

GSDMD-202, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 3,462 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-202ENST00000524846 FAM159AQ6UWV7 190 aa11.55□□□□□ -0.56
GSDMD-202ENST00000524846 ZFAND2AQ8N6M9 145 aa11.55□□□□□ -0.56
GSDMD-202ENST00000524846 LINC00477Q96M19 166 aa11.55□□□□□ -0.56
GSDMD-202ENST00000524846 CRYGDP07320 174 aa11.55□□□□□ -0.56
GSDMD-202ENST00000524846 NPC2P61916 151 aa11.55□□□□□ -0.56
GSDMD-202ENST00000524846 C10orf126Q8N4M7 172 aa11.55□□□□□ -0.56
GSDMD-202ENST00000524846 Q8N6K4 173 aa11.55□□□□□ -0.56
GSDMD-202ENST00000524846 ZNF56Q15929 161 aa11.54□□□□□ -0.56
GSDMD-202ENST00000524846 C9orf139Q6ZV77 190 aa11.54□□□□□ -0.56
GSDMD-202ENST00000524846 SETD2Q9BYW2 2564 aaPredicted RBP11.54□□□□□ -0.56
GSDMD-202ENST00000524846 TRAV12-3A0A0B4J271 114 aa11.54□□□□□ -0.56
GSDMD-202ENST00000524846 J3QQQ9 107 aa11.54□□□□□ -0.56
GSDMD-202ENST00000524846 ATP6V0E2Q8NHE4 81 aa11.54□□□□□ -0.56
GSDMD-202ENST00000524846 ERG28Q9UKR5 140 aa11.54□□□□□ -0.56
GSDMD-202ENST00000524846 PTPN13Q12923 2485 aa11.54□□□□□ -0.56
GSDMD-202ENST00000524846 SDHAF1A6NFY7 115 aa11.54□□□□□ -0.56
GSDMD-202ENST00000524846 NTN5Q8WTR8 489 aaPredicted RBP11.54□□□□□ -0.56
GSDMD-202ENST00000524846 IGHV4-4A0A075B6R2 117 aa11.53□□□□□ -0.56
GSDMD-202ENST00000524846 SNCGO76070 127 aa11.53□□□□□ -0.56
GSDMD-202ENST00000524846 MINOS1Q5TGZ0 78 aa11.53□□□□□ -0.56
GSDMD-202ENST00000524846 MINOS1-NBL1R4GNA1 71 aa11.53□□□□□ -0.56
GSDMD-202ENST00000524846 TRBV7-1A0A0A6YYK4 115 aa11.53□□□□□ -0.56
GSDMD-202ENST00000524846 UBE2D3P61077 147 aa11.53□□□□□ -0.56
GSDMD-202ENST00000524846 UBE2D2P62837 147 aa11.53□□□□□ -0.56
GSDMD-202ENST00000524846 TSHBP01222 138 aa11.52□□□□□ -0.56
GSDMD-202ENST00000524846 PF4V1P10720 104 aa11.52□□□□□ -0.56
GSDMD-202ENST00000524846 COX6B1P14854 86 aa11.52□□□□□ -0.56
GSDMD-202ENST00000524846 TCF15Q12870 199 aa11.52□□□□□ -0.56
GSDMD-202ENST00000524846 CDSNQ15517 529 aa11.52□□□□□ -0.56
GSDMD-202ENST00000524846 GAGE2BQ13066 116 aa11.52□□□□□ -0.57
GSDMD-202ENST00000524846 GAGE2EQ4V326 116 aa11.52□□□□□ -0.57
GSDMD-202ENST00000524846 GAGE2DQ9UEU5 116 aa11.52□□□□□ -0.57
GSDMD-202ENST00000524846 MYO9AB2RTY4 2548 aa11.52□□□□□ -0.57
GSDMD-202ENST00000524846 TLN2Q9Y4G6 2542 aa11.52□□□□□ -0.57
GSDMD-202ENST00000524846 TRAV41A0A0B4J266 112 aa11.52□□□□□ -0.57
GSDMD-202ENST00000524846 TTC32Q5I0X7 151 aa11.52□□□□□ -0.57
GSDMD-202ENST00000524846 IGLV4-69A0A075B6H9 119 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 IGHV3-30P01768 117 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 IGHV3-30-5P0DP03 117 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 SUMO4Q6EEV6 95 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 ZNRF2Q8NHG8 242 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 LINC01619G3V211 115 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 VCYO14598 125 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 PAPPA-AS1Q5QFB9 102 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 BRD3OSQ6XYD6 125 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 OVOL1O14753 267 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 RNASE3P12724 160 aaKnown RBP11.51□□□□□ -0.57
GSDMD-202ENST00000524846 GPHB5Q86YW7 130 aa11.51□□□□□ -0.57
GSDMD-202ENST00000524846 PPP1R17O96001 155 aa11.5□□□□□ -0.57
GSDMD-202ENST00000524846 MUSTN1Q8IVN3 82 aa11.5□□□□□ -0.57
GSDMD-202ENST00000524846 TRAV12-2A0A075B6T6 113 aa11.5□□□□□ -0.57
GSDMD-202ENST00000524846 SPXQ9BT56 116 aa11.5□□□□□ -0.57
GSDMD-202ENST00000524846 TMEM262E9PQX1 116 aa11.5□□□□□ -0.57
GSDMD-202ENST00000524846 SLC25A29Q8N8R3 303 aa11.5□□□□□ -0.57
GSDMD-202ENST00000524846 COL12A1Q99715 3063 aa11.49□□□□□ -0.57
GSDMD-202ENST00000524846 MRPL53Q96EL3 112 aaKnown RBP11.49□□□□□ -0.57
GSDMD-202ENST00000524846 EBI3Q14213 229 aa11.49□□□□□ -0.57
GSDMD-202ENST00000524846 RNASE13Q5GAN3 156 aaKnown RBP11.49□□□□□ -0.57
GSDMD-202ENST00000524846 RHPN1-AS1Q9BWJ2 59 aa11.48□□□□□ -0.57
GSDMD-202ENST00000524846 ZNF580Q9UK33 172 aa11.48□□□□□ -0.57
GSDMD-202ENST00000524846 IGHV3-73A0A0B4J1V6 119 aa11.48□□□□□ -0.57
GSDMD-202ENST00000524846 CENPVL3A0A0U1RRI6 287 aa11.48□□□□□ -0.57
GSDMD-202ENST00000524846 RNF223E7ERA6 249 aa11.48□□□□□ -0.57
GSDMD-202ENST00000524846 A0A0J9YXV3 536 aa11.47□□□□□ -0.57
GSDMD-202ENST00000524846 IGIPA6NJ69 53 aa11.47□□□□□ -0.57
GSDMD-202ENST00000524846 USP9XQ93008 2570 aaPredicted RBP11.47□□□□□ -0.57
GSDMD-202ENST00000524846 TRAV4A0A0B4J268 109 aa11.47□□□□□ -0.57
GSDMD-202ENST00000524846 TEX49A0A1B0GTD5 131 aa11.47□□□□□ -0.57
GSDMD-202ENST00000524846 UBE2E1P51965 193 aa11.47□□□□□ -0.57
GSDMD-202ENST00000524846 GAGE5Q13069 117 aa11.46□□□□□ -0.57
GSDMD-202ENST00000524846 GAGE6Q13070 117 aa11.46□□□□□ -0.57
GSDMD-202ENST00000524846 VCX2Q9H322 139 aa11.46□□□□□ -0.57
GSDMD-202ENST00000524846 CRLF1O75462 422 aa11.46□□□□□ -0.58
GSDMD-202ENST00000524846 ITLN2Q8WWU7 325 aaPredicted RBP11.46□□□□□ -0.58
GSDMD-202ENST00000524846 KLK9Q9UKQ9 250 aa11.46□□□□□ -0.58
GSDMD-202ENST00000524846 CENPEQ02224 2701 aa11.46□□□□□ -0.58
GSDMD-202ENST00000524846 NPFFO15130 113 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 EDN2P20800 178 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 SIRPDQ9H106 197 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 LENEPQ9Y5L5 61 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 WNK1Q9H4A3 2382 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 NACAE9PAV3 2078 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 ELANEP08246 267 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 BPESC1Q9GZL8 116 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 POLQO75417 2590 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 Q8N1Y9 231 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 TMEM141Q96I45 108 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 AJUBAQ96IF1 538 aa11.45□□□□□ -0.58
GSDMD-202ENST00000524846 TRAV8-4A0A0B4J246 113 aa11.44□□□□□ -0.58
GSDMD-202ENST00000524846 IGHV3-33P01772 117 aa11.44□□□□□ -0.58
GSDMD-202ENST00000524846 C5orf56Q8N8D9 126 aa11.44□□□□□ -0.58
GSDMD-202ENST00000524846 MDFICQ9P1T7 246 aa11.44□□□□□ -0.58
GSDMD-202ENST00000524846 U3KQE9 123 aa11.44□□□□□ -0.58
GSDMD-202ENST00000524846 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
GSDMD-202ENST00000524846 ZNF876PQ49A33 203 aa11.44□□□□□ -0.58
GSDMD-202ENST00000524846 IGF2-ASQ6U949 168 aa11.44□□□□□ -0.58
GSDMD-202ENST00000524846 POLR2KP53803 58 aaKnown RBP11.43□□□□□ -0.58
GSDMD-202ENST00000524846 C2orf82Q6UX34 121 aa11.43□□□□□ -0.58
GSDMD-202ENST00000524846 C3orf56Q8N813 242 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms