RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 SH2D6Q7Z4S9 175 aa12.32□□□□□ -0.44
PACSIN3-202ENST00000524509 PRADC1Q9BSG0 188 aa12.32□□□□□ -0.44
PACSIN3-202ENST00000524509 HECTD4Q9Y4D8 3996 aa12.32□□□□□ -0.44
PACSIN3-202ENST00000524509 TRBV6-4A0A1B0GX49 114 aa12.31□□□□□ -0.44
PACSIN3-202ENST00000524509 PPP1R2P9O14990 202 aa12.31□□□□□ -0.44
PACSIN3-202ENST00000524509 CRYBA4P53673 196 aa12.31□□□□□ -0.44
PACSIN3-202ENST00000524509 MRPL23Q16540 153 aaKnown RBP12.31□□□□□ -0.44
PACSIN3-202ENST00000524509 POM121L12Q8N7R1 296 aa12.31□□□□□ -0.44
PACSIN3-202ENST00000524509 OR10G8Q8NGN5 311 aa12.31□□□□□ -0.44
PACSIN3-202ENST00000524509 TSKUQ8WUA8 353 aa12.31□□□□□ -0.44
PACSIN3-202ENST00000524509 AP1S3Q96PC3 154 aa12.31□□□□□ -0.44
PACSIN3-202ENST00000524509 ICOSQ9Y6W8 199 aa12.31□□□□□ -0.44
PACSIN3-202ENST00000524509 NUDT3O95989 172 aa12.3□□□□□ -0.44
PACSIN3-202ENST00000524509 TRGC1P0CF51 173 aa12.3□□□□□ -0.44
PACSIN3-202ENST00000524509 GATA1P15976 413 aaPredicted RBP12.3□□□□□ -0.44
PACSIN3-202ENST00000524509 FOXA3P55318 350 aaPredicted RBP12.3□□□□□ -0.44
PACSIN3-202ENST00000524509 RHOHQ15669 191 aa12.3□□□□□ -0.44
PACSIN3-202ENST00000524509 SMIM15Q7Z3B0 74 aa12.3□□□□□ -0.44
PACSIN3-202ENST00000524509 COMMD7Q86VX2 200 aa12.3□□□□□ -0.44
PACSIN3-202ENST00000524509 OR10AG1Q8NH19 301 aa12.3□□□□□ -0.44
PACSIN3-202ENST00000524509 TMEM218A2RU14 115 aa12.29□□□□□ -0.44
PACSIN3-202ENST00000524509 GZMBP10144 247 aa12.29□□□□□ -0.44
PACSIN3-202ENST00000524509 CTRLP40313 264 aa12.29□□□□□ -0.44
PACSIN3-202ENST00000524509 CCL18P55774 89 aa12.29□□□□□ -0.44
PACSIN3-202ENST00000524509 FAM3BP58499 235 aaPredicted RBP12.29□□□□□ -0.44
PACSIN3-202ENST00000524509 RNF212Q495C1 297 aa12.29□□□□□ -0.44
PACSIN3-202ENST00000524509 LYZL1Q6UWQ5 148 aa12.29□□□□□ -0.44
PACSIN3-202ENST00000524509 CNFNQ9BYD5 112 aa12.29□□□□□ -0.44
PACSIN3-202ENST00000524509 A0A0J9YY99 117 aa12.28□□□□□ -0.44
PACSIN3-202ENST00000524509 F8W036 122 aa12.27□□□□□ -0.45
PACSIN3-202ENST00000524509 MT-ND4LP03901 98 aa12.27□□□□□ -0.45
PACSIN3-202ENST00000524509 FAM74A4Q5TZK3 123 aa12.27□□□□□ -0.45
PACSIN3-202ENST00000524509 SEC11CQ9BY50 192 aa12.27□□□□□ -0.45
PACSIN3-202ENST00000524509 SRIP30626 198 aa12.26□□□□□ -0.45
PACSIN3-202ENST00000524509 RAB4BP61018 213 aa12.26□□□□□ -0.45
PACSIN3-202ENST00000524509 UBE2DNLQ8IWF7 75 aa12.26□□□□□ -0.45
PACSIN3-202ENST00000524509 ANAPC16Q96DE5 110 aa12.26□□□□□ -0.45
PACSIN3-202ENST00000524509 VSIG2Q96IQ7 327 aa12.26□□□□□ -0.45
PACSIN3-202ENST00000524509 V9GYV3 84 aa12.26□□□□□ -0.45
PACSIN3-202ENST00000524509 CRYGDP07320 174 aa12.25□□□□□ -0.45
PACSIN3-202ENST00000524509 GYPEP15421 78 aa12.25□□□□□ -0.45
PACSIN3-202ENST00000524509 NTF3P20783 257 aa12.25□□□□□ -0.45
PACSIN3-202ENST00000524509 TWIST1Q15672 202 aa12.25□□□□□ -0.45
PACSIN3-202ENST00000524509 UFSP1Q6NVU6 142 aa12.25□□□□□ -0.45
PACSIN3-202ENST00000524509 SLC25A29Q8N8R3 303 aa12.25□□□□□ -0.45
PACSIN3-202ENST00000524509 NAT8BQ9UHF3 227 aa12.25□□□□□ -0.45
PACSIN3-202ENST00000524509 MUC4Q99102 2169 aa12.25□□□□□ -0.45
PACSIN3-202ENST00000524509 A0A087WWL8 130 aa12.24□□□□□ -0.45
PACSIN3-202ENST00000524509 IGHV3-73A0A0B4J1V6 119 aa12.24□□□□□ -0.45
PACSIN3-202ENST00000524509 TRBV10-1A0A0K0K1A3 114 aa12.24□□□□□ -0.45
PACSIN3-202ENST00000524509 A0A1B0GUT8 65 aa12.24□□□□□ -0.45
PACSIN3-202ENST00000524509 HIGD1CA8MV81 97 aa12.24□□□□□ -0.45
PACSIN3-202ENST00000524509 H7C1H1 209 aa12.24□□□□□ -0.45
PACSIN3-202ENST00000524509 K7EQD1 137 aa12.24□□□□□ -0.45
PACSIN3-202ENST00000524509 NEGR1Q7Z3B1 354 aa12.24□□□□□ -0.45
PACSIN3-202ENST00000524509 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.24□□□□□ -0.45
PACSIN3-202ENST00000524509 GTSF1Q8WW33 167 aa12.24□□□□□ -0.45
PACSIN3-202ENST00000524509 A0A096LPF7 62 aa12.23□□□□□ -0.45
PACSIN3-202ENST00000524509 MUC21A0A0G2JKD1 596 aa12.23□□□□□ -0.45
PACSIN3-202ENST00000524509 MUC21A0A140T8X8 626 aa12.23□□□□□ -0.45
PACSIN3-202ENST00000524509 SSTP61278 116 aa12.23□□□□□ -0.45
PACSIN3-202ENST00000524509 RIGQ13278 110 aa12.23□□□□□ -0.45
PACSIN3-202ENST00000524509 C14orf178Q8N769 122 aaPredicted RBP12.23□□□□□ -0.45
PACSIN3-202ENST00000524509 PGLYRP4Q96LB8 373 aa12.23□□□□□ -0.45
PACSIN3-202ENST00000524509 DPH3P1Q9H4G8 78 aa12.23□□□□□ -0.45
PACSIN3-202ENST00000524509 JPT2Q9H910 190 aa12.23□□□□□ -0.45
PACSIN3-202ENST00000524509 A0A1B0GW15 77 aa12.22□□□□□ -0.45
PACSIN3-202ENST00000524509 F5H697 171 aa12.22□□□□□ -0.45
PACSIN3-202ENST00000524509 ZNF56Q15929 161 aa12.22□□□□□ -0.45
PACSIN3-202ENST00000524509 SAMD10Q9BYL1 202 aa12.22□□□□□ -0.45
PACSIN3-202ENST00000524509 SMIM27A0A1W2PRY6 76 aa12.21□□□□□ -0.45
PACSIN3-202ENST00000524509 S100A8P05109 93 aa12.21□□□□□ -0.45
PACSIN3-202ENST00000524509 NDUFA5Q16718 116 aa12.21□□□□□ -0.45
PACSIN3-202ENST00000524509 FRZBQ92765 325 aa12.21□□□□□ -0.45
PACSIN3-202ENST00000524509 VPS13DQ5THJ4 4388 aa12.2□□□□□ -0.46
PACSIN3-202ENST00000524509 TIRAPP58753 221 aa12.2□□□□□ -0.46
PACSIN3-202ENST00000524509 RPL36AP83881 106 aaKnown RBP12.2□□□□□ -0.46
PACSIN3-202ENST00000524509 RPL36ALQ969Q0 106 aaKnown RBP12.2□□□□□ -0.46
PACSIN3-202ENST00000524509 CTDSP1Q9GZU7 261 aa12.2□□□□□ -0.46
PACSIN3-202ENST00000524509 NUP35Q8NFH5 326 aa12.19□□□□□ -0.46
PACSIN3-202ENST00000524509 KIF25-AS1Q9Y6Z4 181 aa12.19□□□□□ -0.46
PACSIN3-202ENST00000524509 EVI2AP22794 236 aa12.18□□□□□ -0.46
PACSIN3-202ENST00000524509 MSRB1Q9NZV6 116 aa12.18□□□□□ -0.46
PACSIN3-202ENST00000524509 TRBV7-3A0A075B6L6 115 aa12.17□□□□□ -0.46
PACSIN3-202ENST00000524509 MGPP08493 103 aa12.17□□□□□ -0.46
PACSIN3-202ENST00000524509 C10orf91Q5T1B1 145 aa12.17□□□□□ -0.46
PACSIN3-202ENST00000524509 ATP6V0E2Q8NHE4 81 aa12.17□□□□□ -0.46
PACSIN3-202ENST00000524509 DNAJC30Q96LL9 226 aa12.17□□□□□ -0.46
PACSIN3-202ENST00000524509 IMMP2LQ96T52 175 aa12.17□□□□□ -0.46
PACSIN3-202ENST00000524509 UPK3BQ9BT76 320 aa12.17□□□□□ -0.46
PACSIN3-202ENST00000524509 CARHSP1Q9Y2V2 147 aaKnown RBP12.17□□□□□ -0.46
PACSIN3-202ENST00000524509 MRPS16Q9Y3D3 137 aaKnown RBP12.17□□□□□ -0.46
PACSIN3-202ENST00000524509 A0A087WWC5 75 aa12.16□□□□□ -0.46
PACSIN3-202ENST00000524509 ESRGQ1W209 222 aa12.16□□□□□ -0.46
PACSIN3-202ENST00000524509 ATP5L2Q7Z4Y8 100 aa12.16□□□□□ -0.46
PACSIN3-202ENST00000524509 TMEM191AQ9H0A3 160 aa12.16□□□□□ -0.46
PACSIN3-202ENST00000524509 ADCYAP1P18509 176 aa12.15□□□□□ -0.46
PACSIN3-202ENST00000524509 TMEM97Q5BJF2 176 aa12.15□□□□□ -0.46
PACSIN3-202ENST00000524509 KCNIP4Q6PIL6 250 aa12.15□□□□□ -0.46
PACSIN3-202ENST00000524509 LYPD5Q6UWN5 251 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms