RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 PRG4Q92954 1404 aaPredicted RBP1□□□□□ -2.25
CPNE3-207ENST00000523588 PTPRDP23468 1912 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 A0A1W2PRS3 328 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 CDC42EP2O14613 210 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 NPFFO15130 113 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 MT-ND4LP03901 98 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 NMBP08949 121 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 SCTP09683 121 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 IGLC6P0CF74 106 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 AKAIN1P0CW23 69 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 UBA52P62987 128 aaKnown RBP1□□□□□ -2.25
CPNE3-207ENST00000523588 CATR1Q13166 79 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 GTF2H5Q6ZYL4 71 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 MORN4Q8NDC4 146 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 MAGOHBQ96A72 148 aaKnown RBP1□□□□□ -2.25
CPNE3-207ENST00000523588 SDF2Q99470 211 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 LIMD2Q9BT23 127 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 SMCO4Q9NRQ5 59 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 PARP14Q460N5 1801 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 ABCA3Q99758 1704 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 KIF1AQ12756 1690 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 ZGRF1Q86YA3 2104 aa1□□□□□ -2.25
CPNE3-207ENST00000523588 EPRSP07814 1512 aaKnown RBP0.99□□□□□ -2.25
CPNE3-207ENST00000523588 UGGT2Q9NYU1 1516 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 MYOM2P54296 1465 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 ERVK-7P63135 1459 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 MAGI2Q86UL8 1455 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 NRXN1Q9ULB1 1477 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 SHANK2Q9UPX8 1470 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 ABCC5O15440 1437 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 NSD3Q9BZ95 1437 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 A0A1B0GUL6 1792 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 A0A087WXM4 84 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 C3orf85A0A1B0GTC6 90 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 ZNF670-ZNF695F2Z2N8 137 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 J3QR89 54 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 CFDP00746 253 aaPredicted RBP0.99□□□□□ -2.25
CPNE3-207ENST00000523588 SPINK8P0C7L1 97 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 IGLC1P0CG04 106 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 PDE6GP18545 87 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 TPPP2P59282 170 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 IQCJQ1A5X6 159 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 TDRG1Q3Y452 100 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 MEIG1Q5JSS6 88 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 TMEM244Q5VVB8 128 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 UNQ5815/PRO19632Q6UWF5 114 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 TTC9CQ8N5M4 171 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 TEX29Q8N6K0 151 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 CIB3Q96Q77 187 aaPredicted RBP0.99□□□□□ -2.25
CPNE3-207ENST00000523588 S100A13Q99584 98 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 ATG5Q9H1Y0 275 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 RPRMQ9NS64 109 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 BET1LQ9NYM9 111 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 TAS2R8Q9NYW2 309 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 IER3IP1Q9Y5U9 82 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 CUL7Q14999 1698 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 PREX2Q70Z35 1606 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 SYNJ1O43426 1573 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 KDM5CP41229 1560 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 TCHHQ07283 1943 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 A2ML1A8K2U0 1454 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 GOLGA3Q08378 1498 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 KIF13AQ9H1H9 1805 aa0.99□□□□□ -2.25
CPNE3-207ENST00000523588 CASKIN1Q8WXD9 1431 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 LTN1O94822 1766 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 KNDC1Q76NI1 1749 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 ARAP2Q8WZ64 1704 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 ABCA9Q8IUA7 1624 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 MYH8P13535 1937 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 FAM236AA0A1B0GUQ0 79 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 FAM236BA0A1B0GV22 79 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 LOC107986453A0A1B0GWG9 222 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 H3BMG7 143 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 H3BQ15 152 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 DPM2O94777 84 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 MT-ATP8P03928 68 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 HIST1H1DP16402 221 aaKnown RBP0.98□□□□□ -2.25
CPNE3-207ENST00000523588 ADCYAP1P18509 176 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 FOXA3P55318 350 aaPredicted RBP0.98□□□□□ -2.25
CPNE3-207ENST00000523588 GNG11P61952 73 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 Q6AWC8 147 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 TSLPQ969D9 159 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 AP1S3Q96PC3 154 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 VAMP8Q9BV40 100 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 SEC11CQ9BY50 192 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 NPVFQ9HCQ7 196 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 FKBP11Q9NYL4 201 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 LINC00312Q9Y6C7 94 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 FER1L6Q2WGJ9 1857 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 LRRC7Q96NW7 1537 aa0.98□□□□□ -2.25
CPNE3-207ENST00000523588 CROCC2H7BZ55 1655 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 QRICH2Q9H0J4 1663 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 SHROOM2Q13796 1616 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 MADDQ8WXG6 1647 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 DIP2AQ14689 1571 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 IGLC7A0M8Q6 106 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 A6NN06 94 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 BBIP1A8MTZ0 92 aa0.97□□□□□ -2.25
CPNE3-207ENST00000523588 K7EIL1 84 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms