RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 OR10J3Q5JRS4 329 aa11.68□□□□□ -0.54
CCNC-213ENST00000523541 Q6ZSN1 163 aa11.68□□□□□ -0.54
CCNC-213ENST00000523541 SSBP4Q9BWG4 385 aaPredicted RBP11.68□□□□□ -0.54
CCNC-213ENST00000523541 TMSB15BA0A087X1C1 80 aa11.67□□□□□ -0.54
CCNC-213ENST00000523541 TRBV10-1A0A0K0K1A3 114 aa11.67□□□□□ -0.54
CCNC-213ENST00000523541 CDK2AP2O75956 126 aa11.67□□□□□ -0.54
CCNC-213ENST00000523541 LINC00694P0DN24 101 aa11.67□□□□□ -0.54
CCNC-213ENST00000523541 KRTAP10-2P60368 255 aa11.67□□□□□ -0.54
CCNC-213ENST00000523541 AKAP14Q86UN6 197 aa11.67□□□□□ -0.54
CCNC-213ENST00000523541 SAMD10Q9BYL1 202 aa11.67□□□□□ -0.54
CCNC-213ENST00000523541 JPT2Q9H910 190 aa11.67□□□□□ -0.54
CCNC-213ENST00000523541 IBA57-AS1B1ANH7 110 aa11.66□□□□□ -0.54
CCNC-213ENST00000523541 M0R381 172 aa11.66□□□□□ -0.54
CCNC-213ENST00000523541 OR5AL1P0C617 328 aa11.66□□□□□ -0.54
CCNC-213ENST00000523541 MEF2BQ02080 365 aaPredicted RBP11.66□□□□□ -0.54
CCNC-213ENST00000523541 SNAI2O43623 268 aa11.65□□□□□ -0.54
CCNC-213ENST00000523541 CDPF1Q6NVV7 123 aa11.65□□□□□ -0.54
CCNC-213ENST00000523541 MAPKAPK5-AS1Q8N8E1 139 aa11.65□□□□□ -0.54
CCNC-213ENST00000523541 BIN3Q9NQY0 253 aa11.65□□□□□ -0.54
CCNC-213ENST00000523541 GAGE12JA6NER3 117 aa11.64□□□□□ -0.55
CCNC-213ENST00000523541 PSCAO43653 123 aa11.64□□□□□ -0.55
CCNC-213ENST00000523541 GAGE1Q13065 139 aa11.64□□□□□ -0.55
CCNC-213ENST00000523541 GAGE4Q13068 117 aa11.64□□□□□ -0.55
CCNC-213ENST00000523541 GAGE5Q13069 117 aa11.64□□□□□ -0.55
CCNC-213ENST00000523541 LAGE3Q14657 143 aa11.64□□□□□ -0.55
CCNC-213ENST00000523541 GAGE13Q4V321 117 aa11.64□□□□□ -0.55
CCNC-213ENST00000523541 FAM74A4Q5TZK3 123 aa11.64□□□□□ -0.55
CCNC-213ENST00000523541 DAZAP1Q96EP5 407 aaKnown RBP11.64□□□□□ -0.55
CCNC-213ENST00000523541 VAX2Q9UIW0 290 aa11.64□□□□□ -0.55
CCNC-213ENST00000523541 RYR1P21817 5038 aa11.64□□□□□ -0.55
CCNC-213ENST00000523541 RPS20P60866 119 aaKnown RBP11.63□□□□□ -0.55
CCNC-213ENST00000523541 RAB4BP61018 213 aa11.63□□□□□ -0.55
CCNC-213ENST00000523541 C14orf178Q8N769 122 aaPredicted RBP11.63□□□□□ -0.55
CCNC-213ENST00000523541 A0A087WWL8 130 aa11.62□□□□□ -0.55
CCNC-213ENST00000523541 BCL2P10415 239 aa11.62□□□□□ -0.55
CCNC-213ENST00000523541 GNG4P50150 75 aa11.62□□□□□ -0.55
CCNC-213ENST00000523541 PRR27Q6MZM9 219 aa11.62□□□□□ -0.55
CCNC-213ENST00000523541 C9orf62Q8N4C0 152 aa11.62□□□□□ -0.55
CCNC-213ENST00000523541 PCLOQ9Y6V0 5065 aa11.62□□□□□ -0.55
CCNC-213ENST00000523541 DNAH5Q8TE73 4624 aa11.62□□□□□ -0.55
CCNC-213ENST00000523541 HSPG2P98160 4391 aa11.62□□□□□ -0.55
CCNC-213ENST00000523541 A0A087WTM6 91 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 XKRY2A2RUG3 117 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 IGHV3-30P01768 117 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 IGHV3-33P01772 117 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 IGHV3-30-3P0DP02 117 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 IGHV3-30-5P0DP03 117 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 FUSP35637 526 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCNC-213ENST00000523541 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 RPL36AP83881 106 aaKnown RBP11.61□□□□□ -0.55
CCNC-213ENST00000523541 RPL19P84098 196 aaKnown RBP11.61□□□□□ -0.55
CCNC-213ENST00000523541 CENPWQ5EE01 88 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 SPANXN1Q5VSR9 72 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 OR10G8Q8NGN5 311 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 RPL36ALQ969Q0 106 aaKnown RBP11.61□□□□□ -0.55
CCNC-213ENST00000523541 DERL1Q9BUN8 251 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 Q9HAA7 133 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 MED9Q9NWA0 146 aa11.61□□□□□ -0.55
CCNC-213ENST00000523541 TRBV7-3A0A075B6L6 115 aa11.6□□□□□ -0.55
CCNC-213ENST00000523541 IGLV2-8P01709 118 aa11.6□□□□□ -0.55
CCNC-213ENST00000523541 TOR2AQ5JU69 321 aa11.6□□□□□ -0.55
CCNC-213ENST00000523541 OR10AG1Q8NH19 301 aa11.6□□□□□ -0.55
CCNC-213ENST00000523541 TM2D2Q9BX73 214 aa11.6□□□□□ -0.55
CCNC-213ENST00000523541 TRAV8-3A0A0A6YYJ7 113 aa11.59□□□□□ -0.55
CCNC-213ENST00000523541 C19orf71A6NCJ1 209 aa11.59□□□□□ -0.55
CCNC-213ENST00000523541 F2Z2F3 143 aa11.59□□□□□ -0.55
CCNC-213ENST00000523541 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.59□□□□□ -0.55
CCNC-213ENST00000523541 Q9UF83 564 aa11.59□□□□□ -0.55
CCNC-213ENST00000523541 CHCHD7Q9BUK0 85 aa11.58□□□□□ -0.56
CCNC-213ENST00000523541 RAB19A4D1S5 217 aa11.57□□□□□ -0.56
CCNC-213ENST00000523541 P01737 135 aa11.57□□□□□ -0.56
CCNC-213ENST00000523541 SMIM17P0DL12 118 aa11.57□□□□□ -0.56
CCNC-213ENST00000523541 UBE2D3P61077 147 aa11.57□□□□□ -0.56
CCNC-213ENST00000523541 UBE2D2P62837 147 aa11.57□□□□□ -0.56
CCNC-213ENST00000523541 CACNG7P62955 275 aa11.57□□□□□ -0.56
CCNC-213ENST00000523541 OR2D3Q8NGH3 330 aa11.57□□□□□ -0.56
CCNC-213ENST00000523541 LYPD6BQ8NI32 183 aa11.57□□□□□ -0.56
CCNC-213ENST00000523541 COX11Q9Y6N1 276 aa11.57□□□□□ -0.56
CCNC-213ENST00000523541 URGCP-MRPS24S4R325 110 aa11.57□□□□□ -0.56
CCNC-213ENST00000523541 APOBP04114 4563 aaKnown RBP11.57□□□□□ -0.56
CCNC-213ENST00000523541 IGLC6P0CF74 106 aa11.56□□□□□ -0.56
CCNC-213ENST00000523541 ELOBQ15370 118 aa11.56□□□□□ -0.56
CCNC-213ENST00000523541 WDR73Q6P4I2 378 aa11.56□□□□□ -0.56
CCNC-213ENST00000523541 FER1L6-AS1Q8NA97 138 aa11.56□□□□□ -0.56
CCNC-213ENST00000523541 AP1S3Q96PC3 154 aa11.56□□□□□ -0.56
CCNC-213ENST00000523541 hCG_2014768A0A024R1R8 64 aa11.55□□□□□ -0.56
CCNC-213ENST00000523541 TMEM250H0YL14 139 aa11.55□□□□□ -0.56
CCNC-213ENST00000523541 NDUFS6O75380 124 aaKnown RBP11.55□□□□□ -0.56
CCNC-213ENST00000523541 ZNF56Q15929 161 aa11.55□□□□□ -0.56
CCNC-213ENST00000523541 TMEM97Q5BJF2 176 aa11.55□□□□□ -0.56
CCNC-213ENST00000523541 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
CCNC-213ENST00000523541 KIF25-AS1Q9Y6Z4 181 aa11.55□□□□□ -0.56
CCNC-213ENST00000523541 TRBV20OR9-2A0A075B6H5 130 aa11.54□□□□□ -0.56
CCNC-213ENST00000523541 LRCOL1A6NCL2 159 aa11.54□□□□□ -0.56
CCNC-213ENST00000523541 PKIAP61925 76 aa11.54□□□□□ -0.56
CCNC-213ENST00000523541 KCNIP4Q6PIL6 250 aa11.54□□□□□ -0.56
CCNC-213ENST00000523541 NIT1Q86X76 327 aa11.54□□□□□ -0.56
CCNC-213ENST00000523541 KRTAP4-5Q9BYR2 181 aa11.54□□□□□ -0.56
CCNC-213ENST00000523541 RBFOX3A6NFN3 312 aa11.53□□□□□ -0.56
CCNC-213ENST00000523541 F5H697 171 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms