RNA–Protein interactions for RNA: ENST00000523270.1

CNOT8-223, Transcript of CCR4-NOT transcription complex subunit 8, human

TSL 4

Gene CNOT8, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT8-223	ENST00000523270	VAX2	Q9UIW0	290 aa		13.94	□□□□□ -0.18
CNOT8-223	ENST00000523270	GAGE12J	A6NER3	117 aa		13.93	□□□□□ -0.18
CNOT8-223	ENST00000523270	MED14OS	P0DP75	135 aa		13.93	□□□□□ -0.18
CNOT8-223	ENST00000523270	GAGE1	Q13065	139 aa		13.93	□□□□□ -0.18
CNOT8-223	ENST00000523270	GAGE4	Q13068	117 aa		13.93	□□□□□ -0.18
CNOT8-223	ENST00000523270	GAGE5	Q13069	117 aa		13.93	□□□□□ -0.18
CNOT8-223	ENST00000523270	GAGE13	Q4V321	117 aa		13.93	□□□□□ -0.18
CNOT8-223	ENST00000523270	SH2D6	Q7Z4S9	175 aa		13.93	□□□□□ -0.18
CNOT8-223	ENST00000523270	SNAI2	O43623	268 aa		13.92	□□□□□ -0.18
CNOT8-223	ENST00000523270	GNG4	P50150	75 aa		13.92	□□□□□ -0.18
CNOT8-223	ENST00000523270	LY96	Q9Y6Y9	160 aa		13.92	□□□□□ -0.18
CNOT8-223	ENST00000523270	C19orf71	A6NCJ1	209 aa		13.91	□□□□□ -0.18
CNOT8-223	ENST00000523270	RHOD	O00212	210 aa		13.91	□□□□□ -0.18
CNOT8-223	ENST00000523270	DNAH10OS	P0CZ25	163 aa		13.91	□□□□□ -0.18
CNOT8-223	ENST00000523270	GZMB	P10144	247 aa		13.91	□□□□□ -0.18
CNOT8-223	ENST00000523270	ATP6V0E2	Q8NHE4	81 aa		13.91	□□□□□ -0.18
CNOT8-223	ENST00000523270	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.91	□□□□□ -0.18
CNOT8-223	ENST00000523270	BLOC1S1	P78537	153 aa		13.9	□□□□□ -0.18
CNOT8-223	ENST00000523270	LYPD6B	Q8NI32	183 aa		13.9	□□□□□ -0.18
CNOT8-223	ENST00000523270	OR5AL1	P0C617	328 aa		13.89	□□□□□ -0.19
CNOT8-223	ENST00000523270	GTSF1L	Q9H1H1	148 aa		13.89	□□□□□ -0.19
CNOT8-223	ENST00000523270	DNAH5	Q8TE73	4624 aa		13.89	□□□□□ -0.19
CNOT8-223	ENST00000523270	LRP1B	Q9NZR2	4599 aa		13.88	□□□□□ -0.19
CNOT8-223	ENST00000523270	RBFOX3	A6NFN3	312 aa		13.88	□□□□□ -0.19
CNOT8-223	ENST00000523270	BTF3	P20290	206 aa	Known RBP	13.88	□□□□□ -0.19
CNOT8-223	ENST00000523270	SST	P61278	116 aa		13.88	□□□□□ -0.19
CNOT8-223	ENST00000523270	OR2D3	Q8NGH3	330 aa		13.88	□□□□□ -0.19
CNOT8-223	ENST00000523270	IGLC6	P0CF74	106 aa		13.87	□□□□□ -0.19
CNOT8-223	ENST00000523270	TAGLN2	P37802	199 aa	Known RBP	13.87	□□□□□ -0.19
CNOT8-223	ENST00000523270	OR10J3	Q5JRS4	329 aa		13.87	□□□□□ -0.19
CNOT8-223	ENST00000523270	LELP1	Q5T871	98 aa		13.87	□□□□□ -0.19
CNOT8-223	ENST00000523270		Q8N3U1	123 aa		13.87	□□□□□ -0.19
CNOT8-223	ENST00000523270	SMIM12	Q96EX1	92 aa		13.87	□□□□□ -0.19
CNOT8-223	ENST00000523270	IGHV3-38	A0A0C4DH36	116 aa		13.86	□□□□□ -0.19
CNOT8-223	ENST00000523270		K7EN84	100 aa		13.86	□□□□□ -0.19
CNOT8-223	ENST00000523270	EVI2A	P22794	236 aa		13.86	□□□□□ -0.19
CNOT8-223	ENST00000523270	RYR1	P21817	5038 aa		13.85	□□□□□ -0.19
CNOT8-223	ENST00000523270	SPANXN1	Q5VSR9	72 aa		13.85	□□□□□ -0.19
CNOT8-223	ENST00000523270	DAZAP1	Q96EP5	407 aa	Known RBP	13.85	□□□□□ -0.19
CNOT8-223	ENST00000523270	MSRB1	Q9NZV6	116 aa		13.85	□□□□□ -0.19
CNOT8-223	ENST00000523270	TRAV8-6	A0A0B4J262	113 aa		13.84	□□□□□ -0.19
CNOT8-223	ENST00000523270		P01737	135 aa		13.84	□□□□□ -0.19
CNOT8-223	ENST00000523270	LINC01556	Q5JQF7	62 aa		13.84	□□□□□ -0.19
CNOT8-223	ENST00000523270	TOR2A	Q5JU69	321 aa		13.84	□□□□□ -0.19
CNOT8-223	ENST00000523270	TRAV9-2	A0A087WT02	112 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	IGHV3-30	P01768	117 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	IGHV3-33	P01772	117 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	IGHV3-30-3	P0DP02	117 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	IGHV3-30-5	P0DP03	117 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	KRTAP10-2	P60368	255 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	ZNF56	Q15929	161 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	SPATA12	Q7Z6I5	190 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	FER1L6-AS1	Q8NA97	138 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	NUDT10	Q8NFP7	164 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	OCC1	Q8TAD7	63 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	NUDT11	Q96G61	164 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	TPPP3	Q9BW30	176 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	KIF25-AS1	Q9Y6Z4	181 aa		13.83	□□□□□ -0.2
CNOT8-223	ENST00000523270	RPS20	P60866	119 aa	Known RBP	13.82	□□□□□ -0.2
CNOT8-223	ENST00000523270	TMEM250	H0YL14	139 aa		13.81	□□□□□ -0.2
CNOT8-223	ENST00000523270	RAB4B	P61018	213 aa		13.81	□□□□□ -0.2
CNOT8-223	ENST00000523270	RNASE7	Q9H1E1	156 aa	Known RBP	13.81	□□□□□ -0.2
CNOT8-223	ENST00000523270	C16orf90	A8MZG2	172 aa		13.8	□□□□□ -0.2
CNOT8-223	ENST00000523270		K7EP13	123 aa		13.8	□□□□□ -0.2
CNOT8-223	ENST00000523270	UBE2D3	P61077	147 aa		13.8	□□□□□ -0.2
CNOT8-223	ENST00000523270	UBE2D2	P62837	147 aa		13.8	□□□□□ -0.2
CNOT8-223	ENST00000523270	C10orf126	Q8N4M7	172 aa		13.8	□□□□□ -0.2
CNOT8-223	ENST00000523270	NEXN-AS1	Q8NBZ9	246 aa		13.8	□□□□□ -0.2
CNOT8-223	ENST00000523270	TRBV10-1	A0A0K0K1A3	114 aa		13.79	□□□□□ -0.2
CNOT8-223	ENST00000523270	FUS	P35637	526 aa	Known RBP eCLIP	13.79	□□□□□ -0.2	2e-6	■■■■□ 20.8
CNOT8-223	ENST00000523270	CEBPG	P53567	150 aa		13.79	□□□□□ -0.2
CNOT8-223	ENST00000523270	LYZL1	Q6UWQ5	148 aa		13.79	□□□□□ -0.2
CNOT8-223	ENST00000523270	OR10G8	Q8NGN5	311 aa		13.79	□□□□□ -0.2
CNOT8-223	ENST00000523270	FAM210A	Q96ND0	272 aa		13.79	□□□□□ -0.2
CNOT8-223	ENST00000523270	AP1S3	Q96PC3	154 aa		13.79	□□□□□ -0.2
CNOT8-223	ENST00000523270	BIN3	Q9NQY0	253 aa		13.79	□□□□□ -0.2
CNOT8-223	ENST00000523270	NFE4	Q86UQ8	179 aa		13.78	□□□□□ -0.2
CNOT8-223	ENST00000523270	RPP21	Q9H633	154 aa	Known RBP	13.78	□□□□□ -0.2
CNOT8-223	ENST00000523270	APOB	P04114	4563 aa	Known RBP	13.77	□□□□□ -0.2
CNOT8-223	ENST00000523270	TRBV7-3	A0A075B6L6	115 aa		13.77	□□□□□ -0.21
CNOT8-223	ENST00000523270	IBA57-AS1	B1ANH7	110 aa		13.77	□□□□□ -0.21
CNOT8-223	ENST00000523270		F5H697	171 aa		13.77	□□□□□ -0.21
CNOT8-223	ENST00000523270	RPL36A	P83881	106 aa	Known RBP	13.77	□□□□□ -0.21
CNOT8-223	ENST00000523270	RPL36AL	Q969Q0	106 aa	Known RBP	13.77	□□□□□ -0.21
CNOT8-223	ENST00000523270	EIF5A2	Q9GZV4	153 aa	Known RBP	13.77	□□□□□ -0.21
CNOT8-223	ENST00000523270	HSPG2	P98160	4391 aa		13.76	□□□□□ -0.21
CNOT8-223	ENST00000523270	CACNG7	P62955	275 aa		13.76	□□□□□ -0.21
CNOT8-223	ENST00000523270		Q9HAA7	133 aa		13.76	□□□□□ -0.21
CNOT8-223	ENST00000523270		A0A087WWC5	75 aa		13.75	□□□□□ -0.21
CNOT8-223	ENST00000523270	XKRY2	A2RUG3	117 aa		13.75	□□□□□ -0.21
CNOT8-223	ENST00000523270	MGP	P08493	103 aa		13.75	□□□□□ -0.21
CNOT8-223	ENST00000523270	SRP19	P09132	144 aa	Known RBP	13.75	□□□□□ -0.21
CNOT8-223	ENST00000523270	CTRL	P40313	264 aa		13.75	□□□□□ -0.21
CNOT8-223	ENST00000523270	DAZ4	Q86SG3	579 aa	Known RBP	13.75	□□□□□ -0.21
CNOT8-223	ENST00000523270	DAZ3	Q9NR90	486 aa	Known RBP	13.75	□□□□□ -0.21
CNOT8-223	ENST00000523270		A0A087WTM6	91 aa		13.74	□□□□□ -0.21
CNOT8-223	ENST00000523270	SMIM17	P0DL12	118 aa		13.74	□□□□□ -0.21
CNOT8-223	ENST00000523270	ERVFC1-1	P60608	527 aa		13.74	□□□□□ -0.21
CNOT8-223	ENST00000523270	GTSF1	Q8WW33	167 aa		13.74	□□□□□ -0.21
CNOT8-223	ENST00000523270		F2Z2F3	143 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms