RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TMEM61Q8N0U2 210 aa12.54□□□□□ -0.4
PCDHA3-201ENST00000522353 NAV3Q8IVL0 2385 aa12.54□□□□□ -0.4
PCDHA3-201ENST00000522353 DKK2Q9UBU2 259 aa12.53□□□□□ -0.4
PCDHA3-201ENST00000522353 DENND4CQ5VZ89 1909 aa12.53□□□□□ -0.4
PCDHA3-201ENST00000522353 ETDCA0A1B0GVM5 59 aa12.53□□□□□ -0.4
PCDHA3-201ENST00000522353 WFDC11Q8NEX6 87 aa12.53□□□□□ -0.4
PCDHA3-201ENST00000522353 Q9H8V8 135 aa12.53□□□□□ -0.4
PCDHA3-201ENST00000522353 PATE2Q6UY27 113 aa12.53□□□□□ -0.4
PCDHA3-201ENST00000522353 C9orf47Q6ZRZ4 202 aa12.53□□□□□ -0.4
PCDHA3-201ENST00000522353 ZNF843Q8N446 348 aa12.53□□□□□ -0.4
PCDHA3-201ENST00000522353 ESM1Q9NQ30 184 aa12.53□□□□□ -0.4
PCDHA3-201ENST00000522353 TIRAPP58753 221 aa12.52□□□□□ -0.41
PCDHA3-201ENST00000522353 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
PCDHA3-201ENST00000522353 HAMPP81172 84 aa12.52□□□□□ -0.41
PCDHA3-201ENST00000522353 Q8N1Y9 231 aa12.52□□□□□ -0.41
PCDHA3-201ENST00000522353 K7EP34 96 aa12.52□□□□□ -0.41
PCDHA3-201ENST00000522353 IGHV4-31P0DP07 118 aa12.52□□□□□ -0.41
PCDHA3-201ENST00000522353 IGLV10-54A0A075B6I4 117 aa12.51□□□□□ -0.41
PCDHA3-201ENST00000522353 LYPD6Q86Y78 171 aa12.51□□□□□ -0.41
PCDHA3-201ENST00000522353 TRBV7-3A0A075B6L6 115 aa12.51□□□□□ -0.41
PCDHA3-201ENST00000522353 ETDBQ3ZM63 59 aa12.51□□□□□ -0.41
PCDHA3-201ENST00000522353 KIF26AQ9ULI4 1882 aaPredicted RBP12.5□□□□□ -0.41
PCDHA3-201ENST00000522353 CARD19Q96LW7 228 aa12.5□□□□□ -0.41
PCDHA3-201ENST00000522353 ODF3L1Q8IXM7 274 aa12.5□□□□□ -0.41
PCDHA3-201ENST00000522353 IGHG4P01861 327 aa12.5□□□□□ -0.41
PCDHA3-201ENST00000522353 NCKAP5O14513 1909 aa12.5□□□□□ -0.41
PCDHA3-201ENST00000522353 NACAE9PAV3 2078 aa12.5□□□□□ -0.41
PCDHA3-201ENST00000522353 SPRY2O43597 315 aa12.5□□□□□ -0.41
PCDHA3-201ENST00000522353 TRAV4A0A0B4J268 109 aa12.49□□□□□ -0.41
PCDHA3-201ENST00000522353 A0A1W2PPM0 123 aa12.49□□□□□ -0.41
PCDHA3-201ENST00000522353 FSTL3O95633 263 aa12.49□□□□□ -0.41
PCDHA3-201ENST00000522353 SHISA2Q6UWI4 295 aa12.49□□□□□ -0.41
PCDHA3-201ENST00000522353 Q6YL49 198 aa12.49□□□□□ -0.41
PCDHA3-201ENST00000522353 MRPL36Q9P0J6 103 aaKnown RBP12.49□□□□□ -0.41
PCDHA3-201ENST00000522353 MED14OSP0DP75 135 aa12.49□□□□□ -0.41
PCDHA3-201ENST00000522353 PRSS47A8MTI9 375 aa12.48□□□□□ -0.41
PCDHA3-201ENST00000522353 FREM1Q5H8C1 2179 aa12.48□□□□□ -0.41
PCDHA3-201ENST00000522353 INAFM1C9JVW0 142 aa12.48□□□□□ -0.41
PCDHA3-201ENST00000522353 TMEM263Q8WUH6 116 aaKnown RBP12.48□□□□□ -0.41
PCDHA3-201ENST00000522353 PRO0255Q9UI72 69 aa12.48□□□□□ -0.41
PCDHA3-201ENST00000522353 ABCA2Q9BZC7 2435 aa12.48□□□□□ -0.41
PCDHA3-201ENST00000522353 ODF3BA8MYP8 253 aa12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 NDUFA1O15239 70 aa12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 RPL39LQ96EH5 51 aaKnown RBP12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 C2orf16Q68DN1 1984 aa12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 LINC01545Q5VT33 79 aa12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 IGLL5B9A064 214 aa12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 IFITM1P13164 125 aa12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 FANCD2OSQ96PS1 177 aa12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 A0A0J9YX75 114 aa12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 CFC1BP0CG36 223 aa12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 CFC1P0CG37 223 aa12.47□□□□□ -0.41
PCDHA3-201ENST00000522353 DEFB4AO15263 64 aa12.46□□□□□ -0.41
PCDHA3-201ENST00000522353 C12orf74Q32Q52 190 aa12.46□□□□□ -0.41
PCDHA3-201ENST00000522353 ADAMTS9Q9P2N4 1935 aa12.46□□□□□ -0.41
PCDHA3-201ENST00000522353 PRAC2D3DTV9 90 aa12.46□□□□□ -0.41
PCDHA3-201ENST00000522353 GATA1P15976 413 aaPredicted RBP12.46□□□□□ -0.41
PCDHA3-201ENST00000522353 ZFP2Q6ZN57 461 aa12.46□□□□□ -0.41
PCDHA3-201ENST00000522353 K7EP13 123 aa12.46□□□□□ -0.41
PCDHA3-201ENST00000522353 C9orf153Q5TBE3 101 aa12.46□□□□□ -0.42
PCDHA3-201ENST00000522353 UNQ9165/PRO28630Q6UXU0 137 aa12.46□□□□□ -0.42
PCDHA3-201ENST00000522353 HIST2H2BCQ6DN03 193 aa12.46□□□□□ -0.42
PCDHA3-201ENST00000522353 IGF2RP11717 2491 aa12.45□□□□□ -0.42
PCDHA3-201ENST00000522353 DOPEY1Q5JWR5 2465 aa12.45□□□□□ -0.42
PCDHA3-201ENST00000522353 COA6Q5JTJ3 125 aaKnown RBP12.45□□□□□ -0.42
PCDHA3-201ENST00000522353 C11orf45Q8TAV5 145 aa12.45□□□□□ -0.42
PCDHA3-201ENST00000522353 FAM167A-AS1Q96KT0 104 aa12.45□□□□□ -0.42
PCDHA3-201ENST00000522353 MAP6D1Q9H9H5 199 aa12.45□□□□□ -0.42
PCDHA3-201ENST00000522353 DEFB125Q8N687 156 aa12.44□□□□□ -0.42
PCDHA3-201ENST00000522353 IGF1P05019 195 aa12.44□□□□□ -0.42
PCDHA3-201ENST00000522353 LINC00574Q9H8X3 128 aa12.44□□□□□ -0.42
PCDHA3-201ENST00000522353 LTBP2Q14767 1821 aa12.44□□□□□ -0.42
PCDHA3-201ENST00000522353 VSIG2Q96IQ7 327 aa12.44□□□□□ -0.42
PCDHA3-201ENST00000522353 TRBV12-3P01733 135 aa12.43□□□□□ -0.42
PCDHA3-201ENST00000522353 CXCL5P42830 114 aa12.43□□□□□ -0.42
PCDHA3-201ENST00000522353 TRBV10-1A0A0K0K1A3 114 aa12.43□□□□□ -0.42
PCDHA3-201ENST00000522353 K7ERJ3 54 aa12.43□□□□□ -0.42
PCDHA3-201ENST00000522353 MSRB1Q9NZV6 116 aa12.43□□□□□ -0.42
PCDHA3-201ENST00000522353 ORMDL1Q9P0S3 153 aa12.43□□□□□ -0.42
PCDHA3-201ENST00000522353 KLK12Q9UKR0 248 aa12.43□□□□□ -0.42
PCDHA3-201ENST00000522353 E7EUB6 86 aa12.42□□□□□ -0.42
PCDHA3-201ENST00000522353 H3BMG7 143 aa12.42□□□□□ -0.42
PCDHA3-201ENST00000522353 DEFB105AQ8NG35 78 aa12.42□□□□□ -0.42
PCDHA3-201ENST00000522353 A0A0J9YXV3 536 aa12.42□□□□□ -0.42
PCDHA3-201ENST00000522353 COX7B2Q8TF08 81 aa12.42□□□□□ -0.42
PCDHA3-201ENST00000522353 hADV29S1A0JD25 119 aa12.41□□□□□ -0.42
PCDHA3-201ENST00000522353 Q6ZVH6 145 aa12.41□□□□□ -0.42
PCDHA3-201ENST00000522353 LGALS9O00182 355 aa12.41□□□□□ -0.42
PCDHA3-201ENST00000522353 FUSP35637 526 aaKnown RBP eCLIP12.41□□□□□ -0.42
PCDHA3-201ENST00000522353 C14orf177Q52M58 125 aa12.41□□□□□ -0.42
PCDHA3-201ENST00000522353 TINCRA0A1B0GVN0 87 aa12.4□□□□□ -0.42
PCDHA3-201ENST00000522353 SMIM9A6NGZ8 99 aa12.4□□□□□ -0.42
PCDHA3-201ENST00000522353 NPSP0C0P6 89 aa12.4□□□□□ -0.42
PCDHA3-201ENST00000522353 PRR14LQ5THK1 2151 aa12.4□□□□□ -0.42
PCDHA3-201ENST00000522353 SND1-IT1Q9HBX3 110 aa12.4□□□□□ -0.42
PCDHA3-201ENST00000522353 UBE2AP49459 152 aa12.4□□□□□ -0.42
PCDHA3-201ENST00000522353 PCP2Q8IVA1 136 aa12.4□□□□□ -0.42
PCDHA3-201ENST00000522353 PLA2G2EQ9NZK7 142 aa12.4□□□□□ -0.42
PCDHA3-201ENST00000522353 H0YGX0 51 aa12.39□□□□□ -0.43
PCDHA3-201ENST00000522353 HILS1P60008 231 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms