RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 URGCP-MRPS24S4R325 110 aa10.81□□□□□ -0.68
LSM1-203ENST00000520755 SCO1O75880 301 aa10.8□□□□□ -0.68
LSM1-203ENST00000520755 ATP5G1P05496 136 aa10.8□□□□□ -0.68
LSM1-203ENST00000520755 CFAP126Q5VTH2 177 aa10.8□□□□□ -0.68
LSM1-203ENST00000520755 UFSP1Q6NVU6 142 aa10.8□□□□□ -0.68
LSM1-203ENST00000520755 MRPL54Q6P161 138 aaKnown RBP10.8□□□□□ -0.68
LSM1-203ENST00000520755 TMEM88Q6PEY1 159 aa10.8□□□□□ -0.68
LSM1-203ENST00000520755 KIF25-AS1Q9Y6Z4 181 aa10.8□□□□□ -0.68
LSM1-203ENST00000520755 TRAV4A0A0B4J268 109 aa10.79□□□□□ -0.68
LSM1-203ENST00000520755 IGLL5B9A064 214 aa10.79□□□□□ -0.68
LSM1-203ENST00000520755 CRYGDP07320 174 aa10.79□□□□□ -0.68
LSM1-203ENST00000520755 KCNIP4Q6PIL6 250 aa10.79□□□□□ -0.68
LSM1-203ENST00000520755 ZNF479Q96JC4 524 aa10.79□□□□□ -0.68
LSM1-203ENST00000520755 AP1S3Q96PC3 154 aa10.79□□□□□ -0.68
LSM1-203ENST00000520755 DYNC2H1Q8NCM8 4307 aaKnown RBP10.79□□□□□ -0.68
LSM1-203ENST00000520755 A0A087WWL8 130 aa10.78□□□□□ -0.68
LSM1-203ENST00000520755 F5H768 121 aa10.78□□□□□ -0.68
LSM1-203ENST00000520755 IGHV3-53P01767 116 aa10.78□□□□□ -0.68
LSM1-203ENST00000520755 LINC00315P59091 139 aa10.78□□□□□ -0.68
LSM1-203ENST00000520755 ELOBQ15370 118 aa10.78□□□□□ -0.68
LSM1-203ENST00000520755 TWIST1Q15672 202 aa10.78□□□□□ -0.68
LSM1-203ENST00000520755 BORCS7Q96B45 105 aa10.78□□□□□ -0.68
LSM1-203ENST00000520755 PLECQ15149 4684 aaKnown RBP10.78□□□□□ -0.68
LSM1-203ENST00000520755 TRAV9-1A0A075B6T8 112 aa10.77□□□□□ -0.69
LSM1-203ENST00000520755 A8MWV9 139 aa10.77□□□□□ -0.69
LSM1-203ENST00000520755 HOXA5P20719 270 aa10.77□□□□□ -0.69
LSM1-203ENST00000520755 EVI2AP22794 236 aa10.77□□□□□ -0.69
LSM1-203ENST00000520755 RIGQ13278 110 aa10.77□□□□□ -0.69
LSM1-203ENST00000520755 ATP5L2Q7Z4Y8 100 aa10.77□□□□□ -0.69
LSM1-203ENST00000520755 C14orf178Q8N769 122 aaPredicted RBP10.77□□□□□ -0.69
LSM1-203ENST00000520755 GATD1Q8NB37 220 aa10.77□□□□□ -0.69
LSM1-203ENST00000520755 BTF3L4Q96K17 158 aa10.77□□□□□ -0.69
LSM1-203ENST00000520755 TGIF2-C20orf24A0A0A6YYL0 155 aa10.76□□□□□ -0.69
LSM1-203ENST00000520755 IGHV3-73A0A0B4J1V6 119 aa10.76□□□□□ -0.69
LSM1-203ENST00000520755 TRGC1P0CF51 173 aa10.76□□□□□ -0.69
LSM1-203ENST00000520755 S100PP25815 95 aa10.76□□□□□ -0.69
LSM1-203ENST00000520755 HBBP68871 147 aa10.76□□□□□ -0.69
LSM1-203ENST00000520755 FAM74A4Q5TZK3 123 aa10.76□□□□□ -0.69
LSM1-203ENST00000520755 OR4C5Q8NGB2 326 aa10.76□□□□□ -0.69
LSM1-203ENST00000520755 CAMPP49913 170 aa10.75□□□□□ -0.69
LSM1-203ENST00000520755 FHL2Q14192 279 aa10.75□□□□□ -0.69
LSM1-203ENST00000520755 SMCO4Q9NRQ5 59 aa10.75□□□□□ -0.69
LSM1-203ENST00000520755 A0A1B0GW15 77 aa10.74□□□□□ -0.69
LSM1-203ENST00000520755 ZFP2Q6ZN57 461 aa10.74□□□□□ -0.69
LSM1-203ENST00000520755 Q6ZSN1 163 aa10.74□□□□□ -0.69
LSM1-203ENST00000520755 RNF185Q96GF1 192 aa10.74□□□□□ -0.69
LSM1-203ENST00000520755 TMEM191AQ9H0A3 160 aa10.74□□□□□ -0.69
LSM1-203ENST00000520755 DPH3P1Q9H4G8 78 aa10.74□□□□□ -0.69
LSM1-203ENST00000520755 TRBV24-1A0A075B6N3 115 aa10.73□□□□□ -0.69
LSM1-203ENST00000520755 RHODO00212 210 aa10.73□□□□□ -0.69
LSM1-203ENST00000520755 GATA1P15976 413 aaPredicted RBP10.73□□□□□ -0.69
LSM1-203ENST00000520755 AMN1Q8IY45 258 aa10.73□□□□□ -0.69
LSM1-203ENST00000520755 TENM2Q9NT68 2774 aa10.72□□□□□ -0.69
LSM1-203ENST00000520755 TRAV26-1A0A087WT03 109 aa10.72□□□□□ -0.69
LSM1-203ENST00000520755 TRGV4A0A0C4DH28 118 aa10.72□□□□□ -0.69
LSM1-203ENST00000520755 A0A0J9YY99 117 aa10.72□□□□□ -0.69
LSM1-203ENST00000520755 MGPP08493 103 aa10.72□□□□□ -0.69
LSM1-203ENST00000520755 TMEM136Q6ZRR5 245 aa10.72□□□□□ -0.69
LSM1-203ENST00000520755 APLNQ9ULZ1 77 aa10.72□□□□□ -0.69
LSM1-203ENST00000520755 ZNF56Q15929 161 aa10.71□□□□□ -0.69
LSM1-203ENST00000520755 RASL11AQ6T310 242 aa10.71□□□□□ -0.69
LSM1-203ENST00000520755 FAM210BQ96KR6 192 aa10.71□□□□□ -0.69
LSM1-203ENST00000520755 CIDEAO60543 219 aa10.7□□□□□ -0.7
LSM1-203ENST00000520755 GAS8-AS1O95177 125 aa10.7□□□□□ -0.7
LSM1-203ENST00000520755 S100A8P05109 93 aa10.7□□□□□ -0.7
LSM1-203ENST00000520755 SMIM17P0DL12 118 aa10.7□□□□□ -0.7
LSM1-203ENST00000520755 TCTAP57738 103 aa10.7□□□□□ -0.7
LSM1-203ENST00000520755 FAM104BQ5XKR9 115 aa10.7□□□□□ -0.7
LSM1-203ENST00000520755 SUMO4Q6EEV6 95 aa10.7□□□□□ -0.7
LSM1-203ENST00000520755 VSIG2Q96IQ7 327 aa10.7□□□□□ -0.7
LSM1-203ENST00000520755 Q9UF83 564 aa10.7□□□□□ -0.7
LSM1-203ENST00000520755 TRAV26-2A0A0B4J265 109 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 COLCA2A8K830 154 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 P0DMU3 169 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 FAM231AP0DMU4 169 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 FAM231CP0DMU5 169 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 RAB4AP20338 218 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 CRYBA4P53673 196 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 RAB4BP61018 213 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 SLAQ13239 276 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 MRPL51Q4U2R6 128 aaKnown RBP10.69□□□□□ -0.7
LSM1-203ENST00000520755 SMIM15Q7Z3B0 74 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 SLC25A29Q8N8R3 303 aa10.69□□□□□ -0.7
LSM1-203ENST00000520755 LOC100131303A0A0U1RQF7 123 aa10.68□□□□□ -0.7
LSM1-203ENST00000520755 K7EQD1 137 aa10.68□□□□□ -0.7
LSM1-203ENST00000520755 NUDT3O95989 172 aa10.68□□□□□ -0.7
LSM1-203ENST00000520755 C15orf53Q8NAA6 179 aa10.68□□□□□ -0.7
LSM1-203ENST00000520755 PRO0255Q9UI72 69 aa10.68□□□□□ -0.7
LSM1-203ENST00000520755 HHLA3Q9XRX5 114 aa10.68□□□□□ -0.7
LSM1-203ENST00000520755 TRBV6-4A0A1B0GX49 114 aa10.67□□□□□ -0.7
LSM1-203ENST00000520755 F5H697 171 aa10.67□□□□□ -0.7
LSM1-203ENST00000520755 SMKR1H3BMG3 65 aa10.67□□□□□ -0.7
LSM1-203ENST00000520755 M0QY20 66 aa10.67□□□□□ -0.7
LSM1-203ENST00000520755 PAX4O43316 350 aa10.67□□□□□ -0.7
LSM1-203ENST00000520755 NCR2O95944 276 aa10.67□□□□□ -0.7
LSM1-203ENST00000520755 GNB1LQ9BYB4 327 aa10.67□□□□□ -0.7
LSM1-203ENST00000520755 HLA-DQA1P01909 254 aa10.66□□□□□ -0.7
LSM1-203ENST00000520755 LINC00694P0DN24 101 aa10.66□□□□□ -0.7
LSM1-203ENST00000520755 RPS10P46783 165 aaKnown RBP10.66□□□□□ -0.7
LSM1-203ENST00000520755 H3BNG1 76 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms