RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 FAM110AQ9BQ89 295 aa5.77□□□□□ -1.49
CTHRC1-203ENST00000520337 GFRA4Q9GZZ7 299 aa5.77□□□□□ -1.49
CTHRC1-203ENST00000520337 HLA-DRB4X5D2U9 266 aa5.77□□□□□ -1.49
CTHRC1-203ENST00000520337 TRAV9-2A0A087WT02 112 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 IGKV3D-20A0A0C4DH25 116 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 A8MWL6 223 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 IGKV3-20P01619 116 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 CD7P09564 240 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 OR5AL1P0C617 328 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 FRMD6-AS1P0C7T7 363 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 C3orf79P0CE67 100 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 RNASE4P34096 147 aaKnown RBP5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 HNRNPA3P51991 378 aaKnown RBP5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 FOXA3P55318 350 aaPredicted RBP5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 CMC4P56277 68 aaPredicted RBP5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 TCL1AP56279 114 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 TDRG1Q3Y452 100 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 C9orf66Q5T8R8 295 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 Q6AWC8 147 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 NUP35Q8NFH5 326 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 C18orf32Q8TCD1 76 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 CHCHD1Q96BP2 118 aaKnown RBP5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 LAMTOR2Q9Y2Q5 125 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 TRRAPQ9Y4A5 3859 aa5.76□□□□□ -1.49
CTHRC1-203ENST00000520337 TMEM189A5PLL7 270 aa5.75□□□□□ -1.49
CTHRC1-203ENST00000520337 OR11H12B2RN74 326 aa5.75□□□□□ -1.49
CTHRC1-203ENST00000520337 J3KRW8 73 aa5.75□□□□□ -1.49
CTHRC1-203ENST00000520337 HSBP1O75506 76 aa5.75□□□□□ -1.49
CTHRC1-203ENST00000520337 IGLL1P15814 213 aa5.75□□□□□ -1.49
CTHRC1-203ENST00000520337 LEPP41159 167 aa5.75□□□□□ -1.49
CTHRC1-203ENST00000520337 RPS20P60866 119 aaKnown RBP5.75□□□□□ -1.49
CTHRC1-203ENST00000520337 Q6ZN92 141 aa5.75□□□□□ -1.49
CTHRC1-203ENST00000520337 ALKBH7Q9BT30 221 aaPredicted RBP5.75□□□□□ -1.49
CTHRC1-203ENST00000520337 MCRIP2Q9BUT9 160 aaKnown RBP5.75□□□□□ -1.49
CTHRC1-203ENST00000520337 TMSB15BA0A087X1C1 80 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 TRAV21A0A0B4J279 112 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 A0A1B0GW15 77 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 A0A1B0GXF2 115 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 C7orf71A4D174 169 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 HIGD1CA8MV81 97 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 F2Z2F3 143 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 M0R2Z0 102 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 CRXO43186 299 aaPredicted RBP5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 ORM1P02763 201 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 TSPOP30536 169 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 CDKN1BP46527 198 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 KRTAP10-11P60412 298 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 SPINK13Q1W4C9 94 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 MRPL54Q6P161 138 aaKnown RBP5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 TRPT1Q86TN4 253 aaKnown RBP5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 WFDC10AQ9H1F0 79 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 ST20Q9HBF5 79 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 CMYA5Q8N3K9 4069 aa5.74□□□□□ -1.49
CTHRC1-203ENST00000520337 PKD1L1Q8TDX9 2849 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 TRAV12-2A0A075B6T6 113 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 TRAV12-3A0A0B4J271 114 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 SPINK4O60575 86 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 NPSP0C0P6 89 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 IGLC6P0CF74 106 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 RBMY1A1P0DJD3 496 aaKnown RBP5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 RBMY1CP0DJD4 496 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 FXYD7P58549 80 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 HBBP68871 147 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 RBMY1FQ15415 496 aaKnown RBP5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 KIAA1644Q3SXP7 199 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 ANXA2RQ3ZCQ2 193 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 PET117Q6UWS5 81 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 PGLYRP4Q96LB8 373 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 RCHY1Q96PM5 261 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 TMEM70Q9BUB7 260 aa5.73□□□□□ -1.49
CTHRC1-203ENST00000520337 NACAE9PAV3 2078 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 K7EP13 123 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 GNRH2O43555 120 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 GIG44P09565 113 aaPredicted RBP5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 NTF3P20783 257 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 SLAQ13239 276 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 UBE2V1Q13404 147 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 BATFQ16520 125 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 MUC21Q5SSG8 566 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 STHQ8IWL8 128 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 PMCHL2Q9BQD1 86 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 TMEM191AQ9H0A3 160 aa5.72□□□□□ -1.49
CTHRC1-203ENST00000520337 HSBP1L1C9JCN9 74 aa5.71□□□□□ -1.5
CTHRC1-203ENST00000520337 ARMS2P0C7Q2 107 aa5.71□□□□□ -1.5
CTHRC1-203ENST00000520337 LYZL1Q6UWQ5 148 aa5.71□□□□□ -1.5
CTHRC1-203ENST00000520337 DEFB125Q8N687 156 aa5.71□□□□□ -1.5
CTHRC1-203ENST00000520337 STPG4Q8N801 248 aa5.71□□□□□ -1.5
CTHRC1-203ENST00000520337 FER1L6-AS1Q8NA97 138 aa5.71□□□□□ -1.5
CTHRC1-203ENST00000520337 GATD1Q8NB37 220 aa5.71□□□□□ -1.5
CTHRC1-203ENST00000520337 CNFNQ9BYD5 112 aa5.71□□□□□ -1.5
CTHRC1-203ENST00000520337 HSPB8Q9UJY1 196 aa5.71□□□□□ -1.5
CTHRC1-203ENST00000520337 A0A1B0GUT8 65 aa5.7□□□□□ -1.5
CTHRC1-203ENST00000520337 SNAI2O43623 268 aa5.7□□□□□ -1.5
CTHRC1-203ENST00000520337 RNASE3P12724 160 aaKnown RBP5.7□□□□□ -1.5
CTHRC1-203ENST00000520337 RPL35AP18077 110 aaKnown RBP5.7□□□□□ -1.5
CTHRC1-203ENST00000520337 EGFEM1PQ0D2K5 195 aa5.7□□□□□ -1.5
CTHRC1-203ENST00000520337 RNASEKQ6P5S7 137 aaKnown RBP5.7□□□□□ -1.5
CTHRC1-203ENST00000520337 SPATA12Q7Z6I5 190 aa5.7□□□□□ -1.5
CTHRC1-203ENST00000520337 GTSCR1Q86UQ5 136 aa5.7□□□□□ -1.5
CTHRC1-203ENST00000520337 FAM19A2Q8N3H0 131 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms