RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 RHODO00212 210 aa11.9□□□□□ -0.5
CLK4-204ENST00000520126 NDUFS6O75380 124 aaKnown RBP11.9□□□□□ -0.5
CLK4-204ENST00000520126 SMIM17P0DL12 118 aa11.9□□□□□ -0.5
CLK4-204ENST00000520126 TMEM241Q24JQ0 296 aa11.9□□□□□ -0.5
CLK4-204ENST00000520126 ZFP2Q6ZN57 461 aa11.9□□□□□ -0.5
CLK4-204ENST00000520126 Q6ZSN1 163 aa11.9□□□□□ -0.5
CLK4-204ENST00000520126 HYDINQ4G0P3 5121 aa11.9□□□□□ -0.5
CLK4-204ENST00000520126 TRBV6-4A0A1B0GX49 114 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 GAGE12JA6NER3 117 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 F5H697 171 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 GAGE1Q13065 139 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 GAGE4Q13068 117 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 GAGE5Q13069 117 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 ADIRFQ15847 76 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 ZNF56Q15929 161 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 GAGE13Q4V321 117 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 LYZL1Q6UWQ5 148 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 LINC01551Q86U37 167 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 C14orf178Q8N769 122 aaPredicted RBP11.89□□□□□ -0.51
CLK4-204ENST00000520126 SSBP4Q9BWG4 385 aaPredicted RBP11.89□□□□□ -0.51
CLK4-204ENST00000520126 LY96Q9Y6Y9 160 aa11.89□□□□□ -0.51
CLK4-204ENST00000520126 FAM3BP58499 235 aaPredicted RBP11.88□□□□□ -0.51
CLK4-204ENST00000520126 FAM74A3Q4VXF1 159 aa11.88□□□□□ -0.51
CLK4-204ENST00000520126 SOHLH1Q5JUK2 328 aa11.88□□□□□ -0.51
CLK4-204ENST00000520126 LYPD5Q6UWN5 251 aa11.88□□□□□ -0.51
CLK4-204ENST00000520126 A0A1W2PPQ1 181 aa11.87□□□□□ -0.51
CLK4-204ENST00000520126 CRYGDP07320 174 aa11.87□□□□□ -0.51
CLK4-204ENST00000520126 IGLC6P0CF74 106 aa11.87□□□□□ -0.51
CLK4-204ENST00000520126 CACNG7P62955 275 aa11.87□□□□□ -0.51
CLK4-204ENST00000520126 IFITM2Q01629 132 aa11.87□□□□□ -0.51
CLK4-204ENST00000520126 ZNRF2Q8NHG8 242 aa11.87□□□□□ -0.51
CLK4-204ENST00000520126 SMDT1Q9H4I9 107 aa11.87□□□□□ -0.51
CLK4-204ENST00000520126 Q9H8V8 135 aa11.87□□□□□ -0.51
CLK4-204ENST00000520126 NAT8Q9UHE5 227 aa11.87□□□□□ -0.51
CLK4-204ENST00000520126 F2Z2F3 143 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 MGPP08493 103 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 UFSP1Q6NVU6 142 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 C15orf54Q8N8G6 183 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 AP1S3Q96PC3 154 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 MSRB1Q9NZV6 116 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 MRPS16Q9Y3D3 137 aaKnown RBP11.86□□□□□ -0.51
CLK4-204ENST00000520126 VPS13DQ5THJ4 4388 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 A8MWL6 223 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 NXPH4O95158 308 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 RPL23P62829 140 aaKnown RBP11.86□□□□□ -0.51
CLK4-204ENST00000520126 TWIST1Q15672 202 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 CLLU1Q5K131 121 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 FAM231DQ6ZW35 169 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 SH2D6Q7Z4S9 175 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 PGLYRP4Q96LB8 373 aa11.86□□□□□ -0.51
CLK4-204ENST00000520126 NTF3P20783 257 aa11.85□□□□□ -0.51
CLK4-204ENST00000520126 ATP6V0E2Q8NHE4 81 aa11.85□□□□□ -0.51
CLK4-204ENST00000520126 BORCS7Q96B45 105 aa11.84□□□□□ -0.51
CLK4-204ENST00000520126 Q9UF83 564 aa11.84□□□□□ -0.51
CLK4-204ENST00000520126 TRGC1P0CF51 173 aa11.83□□□□□ -0.52
CLK4-204ENST00000520126 RAB4BP61018 213 aa11.83□□□□□ -0.52
CLK4-204ENST00000520126 OR10G8Q8NGN5 311 aa11.83□□□□□ -0.52
CLK4-204ENST00000520126 GTSF1Q8WW33 167 aa11.83□□□□□ -0.52
CLK4-204ENST00000520126 ISOC2Q96AB3 205 aa11.83□□□□□ -0.52
CLK4-204ENST00000520126 OSTCQ9NRP0 149 aa11.83□□□□□ -0.52
CLK4-204ENST00000520126 NBDYA0A0U1RRE5 68 aa11.82□□□□□ -0.52
CLK4-204ENST00000520126 SIVA1O15304 175 aa11.82□□□□□ -0.52
CLK4-204ENST00000520126 OR10J3Q5JRS4 329 aa11.82□□□□□ -0.52
CLK4-204ENST00000520126 LINC00528Q8N1L1 170 aa11.82□□□□□ -0.52
CLK4-204ENST00000520126 UPK3BQ9BT76 320 aa11.82□□□□□ -0.52
CLK4-204ENST00000520126 EVI2AP22794 236 aa11.81□□□□□ -0.52
CLK4-204ENST00000520126 CTRLP40313 264 aa11.81□□□□□ -0.52
CLK4-204ENST00000520126 RPL36AP83881 106 aaKnown RBP11.81□□□□□ -0.52
CLK4-204ENST00000520126 SMIM15Q7Z3B0 74 aa11.81□□□□□ -0.52
CLK4-204ENST00000520126 RPL36ALQ969Q0 106 aaKnown RBP11.81□□□□□ -0.52
CLK4-204ENST00000520126 KMT2AQ03164 3969 aa11.8□□□□□ -0.52
CLK4-204ENST00000520126 CT83Q5H943 113 aa11.8□□□□□ -0.52
CLK4-204ENST00000520126 WFDC10BQ8IUB3 73 aa11.8□□□□□ -0.52
CLK4-204ENST00000520126 TSKUQ8WUA8 353 aa11.8□□□□□ -0.52
CLK4-204ENST00000520126 GTSF1LQ9H1H1 148 aa11.8□□□□□ -0.52
CLK4-204ENST00000520126 TRAV8-6A0A0B4J262 113 aa11.79□□□□□ -0.52
CLK4-204ENST00000520126 HIGD1CA8MV81 97 aa11.79□□□□□ -0.52
CLK4-204ENST00000520126 WDR73Q6P4I2 378 aa11.79□□□□□ -0.52
CLK4-204ENST00000520126 DPH3P1Q9H4G8 78 aa11.79□□□□□ -0.52
CLK4-204ENST00000520126 KIF25-AS1Q9Y6Z4 181 aa11.79□□□□□ -0.52
CLK4-204ENST00000520126 V9GYV3 84 aa11.79□□□□□ -0.52
CLK4-204ENST00000520126 TTC32Q5I0X7 151 aa11.78□□□□□ -0.52
CLK4-204ENST00000520126 C1orf134Q5TEV5 83 aa11.78□□□□□ -0.52
CLK4-204ENST00000520126 Q6ZR54 194 aa11.78□□□□□ -0.52
CLK4-204ENST00000520126 TRBV7-3A0A075B6L6 115 aa11.77□□□□□ -0.53
CLK4-204ENST00000520126 IGHV3-38A0A0C4DH36 116 aa11.77□□□□□ -0.53
CLK4-204ENST00000520126 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.53
CLK4-204ENST00000520126 H7C1H1 209 aa11.76□□□□□ -0.53
CLK4-204ENST00000520126 FOXA3P55318 350 aaPredicted RBP11.76□□□□□ -0.53
CLK4-204ENST00000520126 LELP1Q5T871 98 aa11.76□□□□□ -0.53
CLK4-204ENST00000520126 SUMO4Q6EEV6 95 aa11.76□□□□□ -0.53
CLK4-204ENST00000520126 COMMD7Q86VX2 200 aa11.76□□□□□ -0.53
CLK4-204ENST00000520126 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.76□□□□□ -0.53
CLK4-204ENST00000520126 NEXN-AS1Q8NBZ9 246 aa11.76□□□□□ -0.53
CLK4-204ENST00000520126 GFRA4Q9GZZ7 299 aa11.76□□□□□ -0.53
CLK4-204ENST00000520126 TNFRSF18Q9Y5U5 241 aa11.76□□□□□ -0.53
CLK4-204ENST00000520126 TRAV9-2A0A087WT02 112 aa11.75□□□□□ -0.53
CLK4-204ENST00000520126 A0A1B0GUT8 65 aa11.75□□□□□ -0.53
CLK4-204ENST00000520126 LINC00315P59091 139 aa11.75□□□□□ -0.53
CLK4-204ENST00000520126 IGHV3-30P01768 117 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms