RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 HIST1H2BLQ99880 126 aa4.16□□□□□ -1.74
PABPC1-207ENST00000518716 ATG5Q9H1Y0 275 aa4.16□□□□□ -1.74
PABPC1-207ENST00000518716 MRPL36Q9P0J6 103 aaKnown RBP4.16□□□□□ -1.74
PABPC1-207ENST00000518716 LINC00588Q9Y4M8 146 aa4.16□□□□□ -1.74
PABPC1-207ENST00000518716 FAM240AA0A1B0GVK7 77 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 A0A1W2PS18 150 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 TMEM235A6NFC5 223 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 ZNF705GA8MUZ8 300 aaPredicted RBP4.15□□□□□ -1.75
PABPC1-207ENST00000518716 FAM90A26D6RGX4 464 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 TMEM262E9PQX1 116 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 INS-IGF2F8WCM5 200 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 PGLYRP1O75594 196 aaPredicted RBP4.15□□□□□ -1.75
PABPC1-207ENST00000518716 KRASP01116 189 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 IGKV1-17P01599 117 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 EIF4EP06730 217 aaKnown RBP4.15□□□□□ -1.75
PABPC1-207ENST00000518716 HLA-DRB4P13762 266 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 NTF3P20783 257 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 TNFSF8P32971 234 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 PRCDQ00LT1 54 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 CATR1Q13166 79 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 PSMG4Q5JS54 123 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 GDF5OSQ5U4N7 250 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 RASL11AQ6T310 242 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 Q6ZRN7 208 aaPredicted RBP4.15□□□□□ -1.75
PABPC1-207ENST00000518716 HOGA1Q86XE5 327 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 OR51H1Q8NH63 302 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 C9orf85Q96MD7 179 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 C18orf15Q96N68 181 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 TM2D2Q9BX73 214 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 WDR61Q9GZS3 305 aaKnown RBP4.15□□□□□ -1.75
PABPC1-207ENST00000518716 SLC25A31Q9H0C2 315 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 SMDT1Q9H4I9 107 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 FKBP11Q9NYL4 201 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 HLA-DRB4X5D2U9 266 aa4.15□□□□□ -1.75
PABPC1-207ENST00000518716 A0A087WWC5 75 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 GGTLC3B5MD39 225 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 FNDC10F2Z333 226 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 SEC11BP0C7V7 166 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 LPAR6P43657 344 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 RND3P61587 244 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 IBA57Q5T440 356 aaKnown RBP4.14□□□□□ -1.75
PABPC1-207ENST00000518716 AADACL3Q5VUY0 350 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 AMTNQ6UX39 209 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 ALKAL2Q6UX46 152 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 TEX43Q6ZNM6 134 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 Q6ZRG5 221 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 SEC22AQ96IW7 307 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 AP1S3Q96PC3 154 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 METTL26Q96S19 204 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 Q9H3A6 140 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 DUSP21Q9H596 190 aa4.14□□□□□ -1.75
PABPC1-207ENST00000518716 RNF213Q63HN8 5207 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 PLAC8L1A1L4L8 177 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 C7orf71A4D174 169 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 A8MTW9 85 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 IGKV1-39P01597 117 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 IGKV1D-39P04432 117 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 ATP5G1P05496 136 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 SPINK8P0C7L1 97 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 BCL2P10415 239 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 HTN3P15516 51 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 ATP5G3P48201 142 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 HNRNPA3P51991 378 aaKnown RBP4.13□□□□□ -1.75
PABPC1-207ENST00000518716 DEFB1P60022 68 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 KRTAP10-1P60331 282 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 ERVK-16P61578 105 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 AKR1C1Q04828 323 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 PNRC1Q12796 327 aaPredicted RBP4.13□□□□□ -1.75
PABPC1-207ENST00000518716 ZNF79Q15937 498 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 RAB37Q96AX2 223 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 LINC00477Q96M19 166 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 UPK3BQ9BT76 320 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 TMEM222Q9H0R3 208 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 MDFICQ9P1T7 246 aa4.13□□□□□ -1.75
PABPC1-207ENST00000518716 TRDV1A0A1B0GX56 115 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 SMKR1H3BMG3 65 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 SOCS3O14543 225 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 BCL2L11O43521 198 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 P0C879 139 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 RNASE2P10153 161 aaKnown RBP4.12□□□□□ -1.75
PABPC1-207ENST00000518716 PRSS3P35030 304 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 CCL18P55774 89 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 H2BFSP57053 126 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 FXYD4P59646 89 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 DAD1P61803 113 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 SNRPD3P62318 126 aaKnown RBP4.12□□□□□ -1.75
PABPC1-207ENST00000518716 TTC32Q5I0X7 151 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 MEIG1Q5JSS6 88 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 SPATA31B1PQ5VZV4 182 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 AMMECR1LQ6DCA0 310 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 UFSP1Q6NVU6 142 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 ATP6V0E2Q8NHE4 81 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 COPS9Q8WXC6 57 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 FRZBQ92765 325 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 NRN1Q9NPD7 142 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 ANAPC10Q9UM13 185 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 TPRKBQ9Y3C4 175 aa4.12□□□□□ -1.75
PABPC1-207ENST00000518716 IGHV3OR16-12A0A075B7B8 117 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 F8W1H4 67 aa4.11□□□□□ -1.75
PABPC1-207ENST00000518716 H3BQ15 152 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms