RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 TREM1Q9NP99 234 aa3.4□□□□□ -1.87
LINC00535-202ENST00000517785 TRBV6-8A0A0A6YYG3 113 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 ANKRD20A5PA0PJZ0 165 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 A8MWV9 139 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 EIF3GO75821 320 aaKnown RBP eCLIP3.39□□□□□ -1.87
LINC00535-202ENST00000517785 CST7O76096 145 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 MALP21145 153 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 FGF7P21781 194 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 ZNF80P51504 273 aaPredicted RBP3.39□□□□□ -1.87
LINC00535-202ENST00000517785 UBE2D3P61077 147 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 UBE2D2P62837 147 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 RBX1P62877 108 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 SSBP1Q04837 148 aaKnown RBP3.39□□□□□ -1.87
LINC00535-202ENST00000517785 UFSP1Q6NVU6 142 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 GOLT1AQ6ZVE7 132 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 DYNC2LI1Q8TCX1 351 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 FXYD5Q96DB9 178 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 DIRAS2Q96HU8 199 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 NMES1Q9C002 83 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 MIXL1Q9H2W2 232 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 UQCC1Q9NVA1 299 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 WDR83OSQ9Y284 106 aa3.39□□□□□ -1.87
LINC00535-202ENST00000517785 PIGBOS1A0A0B4J2F0 54 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 C7orf66A4D0T2 115 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 RGS5O15539 181 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 OR7C2O60412 319 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 RPS10P46783 165 aaKnown RBP3.38□□□□□ -1.87
LINC00535-202ENST00000517785 RPL29P47914 159 aaKnown RBP3.38□□□□□ -1.87
LINC00535-202ENST00000517785 BCAP31P51572 246 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 LINC01547P58512 204 aaPredicted RBP3.38□□□□□ -1.87
LINC00535-202ENST00000517785 S100A10P60903 97 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 GNG5P63218 68 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 UBE2L3P68036 154 aaKnown RBP3.38□□□□□ -1.87
LINC00535-202ENST00000517785 RPL36AP83881 106 aaKnown RBP3.38□□□□□ -1.87
LINC00535-202ENST00000517785 REG3AQ06141 175 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 IL18Q14116 193 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 C1orf137Q5JT78 98 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 C15orf56Q8N910 161 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 MCFD2Q8NI22 146 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 C15orf40Q8WUR7 153 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 GGACTQ9BVM4 153 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 PRR34Q9NV39 138 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 GSKIPQ9P0R6 139 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 RABL2AQ9UBK7 228 aaPredicted RBP3.38□□□□□ -1.87
LINC00535-202ENST00000517785 RAB26Q9ULW5 256 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 LENEPQ9Y5L5 61 aa3.38□□□□□ -1.87
LINC00535-202ENST00000517785 H3BVH4 76 aa3.37□□□□□ -1.87
LINC00535-202ENST00000517785 GCGP01275 180 aa3.37□□□□□ -1.87
LINC00535-202ENST00000517785 MBPP02686 304 aaPredicted RBP3.37□□□□□ -1.87
LINC00535-202ENST00000517785 MT-ND6P03923 174 aa3.37□□□□□ -1.87
LINC00535-202ENST00000517785 S100A4P26447 101 aaKnown RBP3.37□□□□□ -1.87
LINC00535-202ENST00000517785 UBE2D1P51668 147 aa3.37□□□□□ -1.87
LINC00535-202ENST00000517785 MRPS10P82664 201 aaKnown RBP3.37□□□□□ -1.87
LINC00535-202ENST00000517785 IAH1Q2TAA2 248 aaPredicted RBP3.37□□□□□ -1.87
LINC00535-202ENST00000517785 CMTM2Q8TAZ6 248 aa3.37□□□□□ -1.87
LINC00535-202ENST00000517785 SUN5Q8TC36 379 aa3.37□□□□□ -1.87
LINC00535-202ENST00000517785 TMED6Q8WW62 240 aa3.37□□□□□ -1.87
LINC00535-202ENST00000517785 AP3S1Q92572 193 aa3.37□□□□□ -1.87
LINC00535-202ENST00000517785 SLIRPQ9GZT3 109 aaKnown RBP3.37□□□□□ -1.87
LINC00535-202ENST00000517785 VCX3BQ9H321 246 aa3.37□□□□□ -1.87
LINC00535-202ENST00000517785 LSM5Q9Y4Y9 91 aaKnown RBP3.37□□□□□ -1.87
LINC00535-202ENST00000517785 TRBV7-3A0A075B6L6 115 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 IGKV2D-30A0A075B6S6 120 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 IGKV3OR2-268A0A0C4DH90 116 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 L7N2F9 121 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 CTDSP2O14595 271 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 TAS2R30P59541 319 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 VAMP2P63027 116 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 CYCSP99999 105 aaKnown RBP3.36□□□□□ -1.87
LINC00535-202ENST00000517785 CTF1Q16619 201 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 SPANXN2Q5MJ10 180 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 NRACQ8N912 160 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 FER1L6-AS1Q8NA97 138 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 THAP6Q8TBB0 222 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 PTH2Q96A98 100 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 LINC00526Q96FQ7 95 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 RETNLBQ9BQ08 111 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 FUNDC2Q9BWH2 189 aa3.36□□□□□ -1.87
LINC00535-202ENST00000517785 NAA50Q9GZZ1 169 aaKnown RBP3.36□□□□□ -1.87
LINC00535-202ENST00000517785 IGLV1-50A0A075B6I6 118 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 IGKV3D-20A0A0C4DH25 116 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 C9orf170A2RU37 121 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 RHODO00212 210 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 KRTAP1-4P0C5Y4 121 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 NTM-AS1Q6ZSK4 140 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 C20orf203Q8NBC4 194 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 NEXN-AS1Q8NBZ9 246 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 DIRC1Q969H9 104 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 NDFIP1Q9BT67 221 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 NPCDR1Q9BY65 106 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 OTORQ9NRC9 128 aa3.35□□□□□ -1.87
LINC00535-202ENST00000517785 IGLV4-60A0A075B6I1 120 aa3.34□□□□□ -1.87
LINC00535-202ENST00000517785 TRAV1-1A0A0B4J248 108 aa3.34□□□□□ -1.87
LINC00535-202ENST00000517785 TRBV10-1A0A0K0K1A3 114 aa3.34□□□□□ -1.87
LINC00535-202ENST00000517785 A0A1W2PNN7 141 aa3.34□□□□□ -1.87
LINC00535-202ENST00000517785 IGSF23A1L1A6 192 aa3.34□□□□□ -1.87
LINC00535-202ENST00000517785 GRIFINA4D1Z8 144 aa3.34□□□□□ -1.87
LINC00535-202ENST00000517785 H0Y9J4 135 aa3.34□□□□□ -1.87
LINC00535-202ENST00000517785 M0R381 172 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms