RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 FAM162BQ5T6X4 162 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 Q5VSD8 79 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 ATP6V0E2Q8NHE4 81 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 FAM213BQ8TBF2 198 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 SFT2D1Q8WV19 159 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 ZC2HC1AQ96GY0 325 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 PARLQ9H300 379 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 RNF213Q63HN8 5207 aa7.14□□□□□ -1.27
PDGFRB-203ENST00000517660 A0A087WTM6 91 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 PAGE4O60829 102 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 SH2D1AO60880 128 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 SCO1O75880 301 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 APOC3P02656 99 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 ARMS2P0C7Q2 107 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 OR10J3Q5JRS4 329 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 LELP1Q5T871 98 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 Q6ZSN1 163 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 SYT8Q8NBV8 401 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 GTSF1LQ9H1H1 148 aa7.13□□□□□ -1.27
PDGFRB-203ENST00000517660 LRP1Q07954 4544 aaKnown RBP7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 TMEM218A2RU14 115 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 GRIFINA4D1Z8 144 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 H3BVH4 76 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 M0R036 132 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 LTAP01374 205 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 S100A9P06702 114 aaKnown RBP7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 AKR1C3P42330 323 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 XGP55808 180 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 ZNF674Q2M3X9 581 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 DMRTA1Q5VZB9 504 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 UFSP1Q6NVU6 142 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 CDPF1Q6NVV7 123 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 JPT2Q9H910 190 aa7.12□□□□□ -1.27
PDGFRB-203ENST00000517660 GAGE12JA6NER3 117 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 IBA57-AS1B1ANH7 110 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 F8W036 122 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 RHODO00212 210 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 GAGE1Q13065 139 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 GAGE4Q13068 117 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 GAGE5Q13069 117 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 PEA15Q15121 130 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 LINC01559Q495D7 138 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 GAGE13Q4V321 117 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 SAMD10Q9BYL1 202 aa7.11□□□□□ -1.27
PDGFRB-203ENST00000517660 TMSB15BA0A087X1C1 80 aa7.1□□□□□ -1.27
PDGFRB-203ENST00000517660 A0A1B0GV50 99 aa7.1□□□□□ -1.27
PDGFRB-203ENST00000517660 H2AFB1P0C5Y9 115 aa7.1□□□□□ -1.27
PDGFRB-203ENST00000517660 SVBPQ8N300 66 aa7.1□□□□□ -1.27
PDGFRB-203ENST00000517660 LYPD6BQ8NI32 183 aa7.1□□□□□ -1.27
PDGFRB-203ENST00000517660 SFRP2Q96HF1 295 aa7.1□□□□□ -1.27
PDGFRB-203ENST00000517660 TMA7Q9Y2S6 64 aaKnown RBP7.1□□□□□ -1.27
PDGFRB-203ENST00000517660 PHLDA3Q9Y5J5 127 aa7.1□□□□□ -1.27
PDGFRB-203ENST00000517660 FAT3Q8TDW7 4589 aa7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 PSCAO43653 123 aa7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 IGHV3-30P01768 117 aa7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 IGHV3-33P01772 117 aa7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 LINC00694P0DN24 101 aa7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 IGHV3-30-3P0DP02 117 aa7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 IGHV3-30-5P0DP03 117 aa7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 SRSF3P84103 164 aaKnown RBP7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 BAGE2Q86Y30 109 aa7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 ZFP82Q8N141 532 aa7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 C14orf178Q8N769 122 aaPredicted RBP7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 EIF5A2Q9GZV4 153 aaKnown RBP7.09□□□□□ -1.27
PDGFRB-203ENST00000517660 A0A087WWC5 75 aa7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 A0A087WWL8 130 aa7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 SCO2A0A1W2PP80 73 aa7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 J3QL48 77 aa7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 M0R381 172 aa7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 SNAPINO95295 136 aa7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 FUSP35637 526 aaKnown RBP eCLIP7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 FAM74A4Q5TZK3 123 aa7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 MLST8Q9BVC4 326 aa7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 SEC11CQ9BY50 192 aa7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 Q9UF83 564 aa7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 CARHSP1Q9Y2V2 147 aaKnown RBP7.08□□□□□ -1.28
PDGFRB-203ENST00000517660 LRCOL1A6NCL2 159 aa7.07□□□□□ -1.28
PDGFRB-203ENST00000517660 CXCL1P09341 107 aa7.07□□□□□ -1.28
PDGFRB-203ENST00000517660 ADCYAP1P18509 176 aa7.07□□□□□ -1.28
PDGFRB-203ENST00000517660 LAGE3Q14657 143 aa7.07□□□□□ -1.28
PDGFRB-203ENST00000517660 TM2D2Q9BX73 214 aa7.07□□□□□ -1.28
PDGFRB-203ENST00000517660 Q9HAA7 133 aa7.07□□□□□ -1.28
PDGFRB-203ENST00000517660 TRAV1-1A0A0B4J248 108 aa7.06□□□□□ -1.28
PDGFRB-203ENST00000517660 TRBV10-1A0A0K0K1A3 114 aa7.06□□□□□ -1.28
PDGFRB-203ENST00000517660 RBFOX3A6NFN3 312 aa7.06□□□□□ -1.28
PDGFRB-203ENST00000517660 GCSHP23434 173 aa7.06□□□□□ -1.28
PDGFRB-203ENST00000517660 KRTAP10-1P60331 282 aa7.06□□□□□ -1.28
PDGFRB-203ENST00000517660 CCL20P78556 96 aa7.06□□□□□ -1.28
PDGFRB-203ENST00000517660 C10orf91Q5T1B1 145 aa7.06□□□□□ -1.28
PDGFRB-203ENST00000517660 ATRAIDQ6UW56 229 aa7.06□□□□□ -1.28
PDGFRB-203ENST00000517660 TRAV8-3A0A0A6YYJ7 113 aa7.05□□□□□ -1.28
PDGFRB-203ENST00000517660 IFNA1P01562 189 aa7.05□□□□□ -1.28
PDGFRB-203ENST00000517660 RPL35P42766 123 aaKnown RBP7.05□□□□□ -1.28
PDGFRB-203ENST00000517660 RPL19P84098 196 aaKnown RBP7.05□□□□□ -1.28
PDGFRB-203ENST00000517660 NTN5Q8WTR8 489 aaPredicted RBP7.05□□□□□ -1.28
PDGFRB-203ENST00000517660 SSBP4Q9BWG4 385 aaPredicted RBP7.05□□□□□ -1.28
PDGFRB-203ENST00000517660 SMDT1Q9H4I9 107 aa7.05□□□□□ -1.28
PDGFRB-203ENST00000517660 MANBALQ9NQG1 85 aa7.05□□□□□ -1.28
PDGFRB-203ENST00000517660 GNG13Q9P2W3 67 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms