RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 ZFP82Q8N141 532 aa9.55□□□□□ -0.88
PDGFRB-202ENST00000517488 ATP6V0E2Q8NHE4 81 aa9.55□□□□□ -0.88
PDGFRB-202ENST00000517488 TRAV9-2A0A087WT02 112 aa9.54□□□□□ -0.88
PDGFRB-202ENST00000517488 RHODO00212 210 aa9.54□□□□□ -0.88
PDGFRB-202ENST00000517488 IFNA1P01562 189 aa9.54□□□□□ -0.88
PDGFRB-202ENST00000517488 IGLV2-8P01709 118 aa9.54□□□□□ -0.88
PDGFRB-202ENST00000517488 CXCL1P09341 107 aa9.54□□□□□ -0.88
PDGFRB-202ENST00000517488 MED14OSP0DP75 135 aa9.54□□□□□ -0.88
PDGFRB-202ENST00000517488 BCL2P10415 239 aa9.54□□□□□ -0.88
PDGFRB-202ENST00000517488 EVI2AP22794 236 aa9.54□□□□□ -0.88
PDGFRB-202ENST00000517488 OR10AG1Q8NH19 301 aa9.54□□□□□ -0.88
PDGFRB-202ENST00000517488 GTSF1LQ9H1H1 148 aa9.54□□□□□ -0.88
PDGFRB-202ENST00000517488 IGHV3-38A0A0C4DH36 116 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 MUC21A0A0G2JKD1 596 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 MUC21A0A140T8X8 626 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 C16orf90A8MZG2 172 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 PDE6DO43924 150 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 NKX2-5P52952 324 aaPredicted RBP9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 OR10J3Q5JRS4 329 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 LELP1Q5T871 98 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 ALKAL2Q6UX46 152 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 SPATA12Q7Z6I5 190 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 MED9Q9NWA0 146 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 VAX2Q9UIW0 290 aa9.53□□□□□ -0.88
PDGFRB-202ENST00000517488 TRBV20OR9-2A0A075B6H5 130 aa9.52□□□□□ -0.89
PDGFRB-202ENST00000517488 TRAV8-6A0A0B4J262 113 aa9.52□□□□□ -0.89
PDGFRB-202ENST00000517488 K7EP13 123 aa9.52□□□□□ -0.89
PDGFRB-202ENST00000517488 SNAI2O43623 268 aa9.52□□□□□ -0.89
PDGFRB-202ENST00000517488 KRTAP10-2P60368 255 aa9.52□□□□□ -0.89
PDGFRB-202ENST00000517488 LINC01556Q5JQF7 62 aa9.52□□□□□ -0.89
PDGFRB-202ENST00000517488 SSBP4Q9BWG4 385 aaPredicted RBP9.52□□□□□ -0.89
PDGFRB-202ENST00000517488 KRTAP17-1Q9BYP8 105 aa9.52□□□□□ -0.89
PDGFRB-202ENST00000517488 MSRB1Q9NZV6 116 aa9.52□□□□□ -0.89
PDGFRB-202ENST00000517488 BOLA1Q9Y3E2 137 aa9.52□□□□□ -0.89
PDGFRB-202ENST00000517488 OR5AL1P0C617 328 aa9.51□□□□□ -0.89
PDGFRB-202ENST00000517488 GNG4P50150 75 aa9.51□□□□□ -0.89
PDGFRB-202ENST00000517488 SSTP61278 116 aa9.51□□□□□ -0.89
PDGFRB-202ENST00000517488 NFE4Q86UQ8 179 aa9.51□□□□□ -0.89
PDGFRB-202ENST00000517488 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
PDGFRB-202ENST00000517488 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
PDGFRB-202ENST00000517488 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
PDGFRB-202ENST00000517488 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
PDGFRB-202ENST00000517488 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
PDGFRB-202ENST00000517488 GZMBP10144 247 aa9.5□□□□□ -0.89
PDGFRB-202ENST00000517488 C10orf126Q8N4M7 172 aa9.5□□□□□ -0.89
PDGFRB-202ENST00000517488 PCLOQ9Y6V0 5065 aa9.49□□□□□ -0.89
PDGFRB-202ENST00000517488 RBFOX3A6NFN3 312 aa9.49□□□□□ -0.89
PDGFRB-202ENST00000517488 TAGLN2P37802 199 aaKnown RBP9.49□□□□□ -0.89
PDGFRB-202ENST00000517488 SPANXN1Q5VSR9 72 aa9.49□□□□□ -0.89
PDGFRB-202ENST00000517488 Q8N3U1 123 aa9.49□□□□□ -0.89
PDGFRB-202ENST00000517488 OR2D3Q8NGH3 330 aa9.49□□□□□ -0.89
PDGFRB-202ENST00000517488 DAZAP1Q96EP5 407 aaKnown RBP9.49□□□□□ -0.89
PDGFRB-202ENST00000517488 SMIM12Q96EX1 92 aa9.49□□□□□ -0.89
PDGFRB-202ENST00000517488 FUSP35637 526 aaKnown RBP eCLIP9.48□□□□□ -0.89
PDGFRB-202ENST00000517488 BLOC1S1P78537 153 aa9.48□□□□□ -0.89
PDGFRB-202ENST00000517488 TPPP3Q9BW30 176 aa9.48□□□□□ -0.89
PDGFRB-202ENST00000517488 TRBV10-1A0A0K0K1A3 114 aa9.47□□□□□ -0.89
PDGFRB-202ENST00000517488 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
PDGFRB-202ENST00000517488 P01737 135 aa9.47□□□□□ -0.89
PDGFRB-202ENST00000517488 IGLC6P0CF74 106 aa9.47□□□□□ -0.89
PDGFRB-202ENST00000517488 RPS20P60866 119 aaKnown RBP9.47□□□□□ -0.89
PDGFRB-202ENST00000517488 RAB4BP61018 213 aa9.47□□□□□ -0.89
PDGFRB-202ENST00000517488 FER1L6-AS1Q8NA97 138 aa9.47□□□□□ -0.89
PDGFRB-202ENST00000517488 LYPD6BQ8NI32 183 aa9.47□□□□□ -0.89
PDGFRB-202ENST00000517488 ABCA13Q86UQ4 5058 aa9.47□□□□□ -0.89
PDGFRB-202ENST00000517488 A0A087WTM6 91 aa9.46□□□□□ -0.9
PDGFRB-202ENST00000517488 ERVFC1-1P60608 527 aa9.46□□□□□ -0.9
PDGFRB-202ENST00000517488 ZNF56Q15929 161 aa9.46□□□□□ -0.9
PDGFRB-202ENST00000517488 Q9HAA7 133 aa9.46□□□□□ -0.9
PDGFRB-202ENST00000517488 KIF25-AS1Q9Y6Z4 181 aa9.46□□□□□ -0.9
PDGFRB-202ENST00000517488 TRBV7-3A0A075B6L6 115 aa9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 A0A087WWC5 75 aa9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 K7EN84 100 aa9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 UBE2D3P61077 147 aa9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 UBE2D2P62837 147 aa9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 RPL36AP83881 106 aaKnown RBP9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 NUDT10Q8NFP7 164 aa9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 OR10G8Q8NGN5 311 aa9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 OCC1Q8TAD7 63 aa9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 RPL36ALQ969Q0 106 aaKnown RBP9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 NUDT11Q96G61 164 aa9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 BIN3Q9NQY0 253 aa9.45□□□□□ -0.9
PDGFRB-202ENST00000517488 DNAH8Q96JB1 4490 aa9.44□□□□□ -0.9
PDGFRB-202ENST00000517488 F5H697 171 aa9.44□□□□□ -0.9
PDGFRB-202ENST00000517488 DAZ4Q86SG3 579 aaKnown RBP9.44□□□□□ -0.9
PDGFRB-202ENST00000517488 NEXN-AS1Q8NBZ9 246 aa9.44□□□□□ -0.9
PDGFRB-202ENST00000517488 AP1S3Q96PC3 154 aa9.44□□□□□ -0.9
PDGFRB-202ENST00000517488 DAZ3Q9NR90 486 aaKnown RBP9.44□□□□□ -0.9
PDGFRB-202ENST00000517488 XKRY2A2RUG3 117 aa9.43□□□□□ -0.9
PDGFRB-202ENST00000517488 TMEM250H0YL14 139 aa9.43□□□□□ -0.9
PDGFRB-202ENST00000517488 EREGO14944 169 aa9.43□□□□□ -0.9
PDGFRB-202ENST00000517488 SMIM17P0DL12 118 aa9.43□□□□□ -0.9
PDGFRB-202ENST00000517488 LYZL1Q6UWQ5 148 aa9.43□□□□□ -0.9
PDGFRB-202ENST00000517488 RNASE7Q9H1E1 156 aaKnown RBP9.43□□□□□ -0.9
PDGFRB-202ENST00000517488 LRCOL1A6NCL2 159 aa9.42□□□□□ -0.9
PDGFRB-202ENST00000517488 CACNG7P62955 275 aa9.42□□□□□ -0.9
PDGFRB-202ENST00000517488 TOR2AQ5JU69 321 aa9.42□□□□□ -0.9
PDGFRB-202ENST00000517488 NIT1Q86X76 327 aa9.42□□□□□ -0.9
PDGFRB-202ENST00000517488 PGPEP1Q9NXJ5 209 aa9.42□□□□□ -0.9
PDGFRB-202ENST00000517488 F2Z2F3 143 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms