RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 KRTDAPP60985 99 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 CNBPP62633 177 aaKnown RBP2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 IFI27L1Q96BM0 104 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 TVP23CQ96ET8 276 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 KRTAP9-2Q9BYQ4 174 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 KRTAP4-6Q9BYQ5 205 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 KRTAP1-5Q9BYS1 174 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 LINC00474Q9P2X8 69 aa2.15□□□□□ -2.07
RNU4-60P-201ENST00000517239 NINQ8N4C6 2090 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 KDM6BO15054 1643 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 FREM3P0C091 2139 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 MED12LQ86YW9 2145 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 TRAV12-3A0A0B4J271 114 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 CXorf51AA0A1B0GTR3 108 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 HCG22E2RYF7 251 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 CYB5AP00167 134 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 IGHV3-33P01772 117 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 GYPAP02724 150 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 RNASE2P10153 161 aaKnown RBP2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 SEC11AP67812 179 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 C15orf53Q8NAA6 179 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 FAM213BQ8TBF2 198 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 C22orf24Q9Y442 160 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 RP1P56715 2156 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 PSME4Q14997 1843 aa2.14□□□□□ -2.07
RNU4-60P-201ENST00000517239 MYH4Q9Y623 1939 aa2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 PRDM15P57071 1507 aaPredicted RBP2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 TRGV4A0A0C4DH28 118 aa2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 PPYP01298 95 aa2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 NMBP08949 121 aa2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 C6orf52Q5T4I8 152 aa2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 LCE3BQ5TA77 95 aa2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 IGFL1Q6UW32 110 aa2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 TSLPQ969D9 159 aa2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 DMAC1Q96GE9 116 aa2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
RNU4-60P-201ENST00000517239 CTTNBP2Q8WZ74 1663 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 NRXN2Q9P2S2 1712 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 DIP2BQ9P265 1576 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 TRBV6-4A0A1B0GX49 114 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 NUPR2A6NF83 97 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 CCL8P80075 99 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 C10orf55Q5SWW7 151 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 LINC00299Q6ZSB3 139 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 ODF3Q96PU9 254 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 MRPL36Q9P0J6 103 aaKnown RBP2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 MPDZO75970 2070 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 KIF14Q15058 1648 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 ERVK-7P63135 1459 aa2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 EPRSP07814 1512 aaKnown RBP2.12□□□□□ -2.07
RNU4-60P-201ENST00000517239 SNRNP200O75643 2136 aaKnown RBP2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 SHANK1Q9Y566 2161 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 TRBV7-1A0A0A6YYK4 115 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 TRBV7-7A0A0K0K1E9 115 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 MRPS14O60783 128 aaKnown RBP2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 SFT2D2O95562 160 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 CYP2G1PQ6ZSU1 146 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 NDUFA11Q86Y39 141 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 S100A13Q99584 98 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 MGST2Q99735 147 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 C20orf78Q9BR46 151 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 CYP4F30PQ9H0H9 118 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 KLK9Q9UKQ9 250 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 ARFGEF1Q9Y6D6 1849 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 RREB1Q92766 1687 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 MYO18AQ92614 2054 aaKnown RBP2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 BRWD1Q9NSI6 2320 aa2.11□□□□□ -2.07
RNU4-60P-201ENST00000517239 DLEC1Q9Y238 1755 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 EXPH5Q8NEV8 1989 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 MYO3AQ8NEV4 1616 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 MAP3K4Q9Y6R4 1608 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 PLXNA1Q9UIW2 1896 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 PXDNQ92626 1479 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 JMJD7-PLA2G4BH0Y9G9 81 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 DNAL4O96015 105 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 TRAPPC2P0DI81 140 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 TRAPPC2BP0DI82 140 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 ZNF720Q7Z2F6 126 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 S100A16Q96FQ6 103 aaKnown RBP2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 CYYR1Q96J86 154 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 TXNDC17Q9BRA2 123 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 TTTY12Q9BZ98 90 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 MANBALQ9NQG1 85 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 UBR1Q8IWV7 1749 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 PCDH15Q96QU1 1955 aa2.1□□□□□ -2.07
RNU4-60P-201ENST00000517239 PCNX2A6NKB5 2137 aa2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 STRCP1A6NGW2 1772 aa2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 IGKV3-7A0A075B6H7 116 aa2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 TRAV23DV6A0A075B6W5 121 aa2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 SIX6O95475 246 aa2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 RNASE3P12724 160 aaKnown RBP2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 MPV17LQ2QL34 196 aa2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 TDRG1Q3Y452 100 aa2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 C10orf128Q5T292 105 aa2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 ALKAL2Q6UX46 152 aa2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 REG4Q9BYZ8 158 aa2.09□□□□□ -2.07
RNU4-60P-201ENST00000517239 ZGRF1Q86YA3 2104 aa2.09□□□□□ -2.08
RNU4-60P-201ENST00000517239 PEAK1Q9H792 1746 aa2.08□□□□□ -2.08
RNU4-60P-201ENST00000517239 CCDC141Q6ZP82 1450 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms