RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 TRBV7-1A0A0A6YYK4 115 aa10.42□□□□□ -0.74
SH3TC1-225ENST00000515682 IGHV4-61A0A0C4DH41 118 aa10.42□□□□□ -0.74
SH3TC1-225ENST00000515682 HOXB4P17483 251 aaPredicted RBP10.42□□□□□ -0.74
SH3TC1-225ENST00000515682 A4D1N5 150 aa10.42□□□□□ -0.74
SH3TC1-225ENST00000515682 TCL1BO95988 128 aa10.42□□□□□ -0.74
SH3TC1-225ENST00000515682 C16orf54Q6UWD8 224 aa10.42□□□□□ -0.74
SH3TC1-225ENST00000515682 C10orf126Q8N4M7 172 aa10.42□□□□□ -0.74
SH3TC1-225ENST00000515682 C19orf84I3L1E1 186 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 GATA3P23771 443 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 MRGPRG-AS1Q2M3A8 158 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 TRPT1Q86TN4 253 aaKnown RBP10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 GATD1Q8NB37 220 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 PCSK5Q92824 1860 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 M0R2P5 195 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 MEIG1Q5JSS6 88 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 NPBQ8NG41 125 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 RHPN1-AS1Q9BWJ2 59 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 TNFRSF18Q9Y5U5 241 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 SPATA25Q9BR10 227 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 RAI1Q7Z5J4 1906 aaPredicted RBP10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 GAGE5Q13069 117 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 GAGE6Q13070 117 aa10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 RNASE13Q5GAN3 156 aaKnown RBP10.41□□□□□ -0.74
SH3TC1-225ENST00000515682 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.74
SH3TC1-225ENST00000515682 PRSS47A8MTI9 375 aa10.4□□□□□ -0.74
SH3TC1-225ENST00000515682 OVOL3O00110 214 aa10.4□□□□□ -0.74
SH3TC1-225ENST00000515682 TCTEX1D4Q5JR98 221 aa10.4□□□□□ -0.74
SH3TC1-225ENST00000515682 TOMM6Q96B49 74 aa10.4□□□□□ -0.74
SH3TC1-225ENST00000515682 MRPS12O15235 138 aaKnown RBP10.4□□□□□ -0.74
SH3TC1-225ENST00000515682 JPT2Q9H910 190 aa10.4□□□□□ -0.74
SH3TC1-225ENST00000515682 POLQO75417 2590 aa10.4□□□□□ -0.74
SH3TC1-225ENST00000515682 TRAV12-2A0A075B6T6 113 aa10.4□□□□□ -0.75
SH3TC1-225ENST00000515682 RBAKDNA6NC62 111 aa10.4□□□□□ -0.75
SH3TC1-225ENST00000515682 PF4P02776 101 aa10.4□□□□□ -0.75
SH3TC1-225ENST00000515682 CFC1BP0CG36 223 aa10.4□□□□□ -0.75
SH3TC1-225ENST00000515682 CFC1P0CG37 223 aa10.4□□□□□ -0.75
SH3TC1-225ENST00000515682 IGHV3OR16-12A0A075B7B8 117 aa10.39□□□□□ -0.75
SH3TC1-225ENST00000515682 XGP55808 180 aa10.39□□□□□ -0.75
SH3TC1-225ENST00000515682 SNRPD3P62318 126 aaKnown RBP10.39□□□□□ -0.75
SH3TC1-225ENST00000515682 NDUFA11Q86Y39 141 aa10.39□□□□□ -0.75
SH3TC1-225ENST00000515682 H3BMM0 161 aa10.39□□□□□ -0.75
SH3TC1-225ENST00000515682 CIRBPQ14011 172 aaKnown RBP10.39□□□□□ -0.75
SH3TC1-225ENST00000515682 C15orf53Q8NAA6 179 aa10.39□□□□□ -0.75
SH3TC1-225ENST00000515682 UBE2WQ96B02 151 aa10.39□□□□□ -0.75
SH3TC1-225ENST00000515682 NRACQ8N912 160 aa10.38□□□□□ -0.75
SH3TC1-225ENST00000515682 RASL10AQ92737 203 aa10.38□□□□□ -0.75
SH3TC1-225ENST00000515682 ZNF625Q96I27 306 aaPredicted RBP10.38□□□□□ -0.75
SH3TC1-225ENST00000515682 TIMM21Q9BVV7 248 aa10.38□□□□□ -0.75
SH3TC1-225ENST00000515682 TRBV7-3A0A075B6L6 115 aa10.38□□□□□ -0.75
SH3TC1-225ENST00000515682 OPRPNQ99935 248 aaPredicted RBP10.38□□□□□ -0.75
SH3TC1-225ENST00000515682 KLK9Q9UKQ9 250 aa10.38□□□□□ -0.75
SH3TC1-225ENST00000515682 C3orf56Q8N813 242 aa10.38□□□□□ -0.75
SH3TC1-225ENST00000515682 IFITM1P13164 125 aa10.38□□□□□ -0.75
SH3TC1-225ENST00000515682 Q8N9W7 124 aa10.38□□□□□ -0.75
SH3TC1-225ENST00000515682 GAGE12JA6NER3 117 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 GAGE7O76087 117 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 GAGE12FP0CL80 117 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 GAGE12GP0CL81 117 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 GAGE12IP0CL82 117 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 GAGE4Q13068 117 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 KNCNA6PVL3 124 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 SMIM20Q8N5G0 67 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 LINC01548A6NM66 108 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 CFAP126Q5VTH2 177 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 NEXN-AS1Q8NBZ9 246 aa10.37□□□□□ -0.75
SH3TC1-225ENST00000515682 PRRC2AP48634 2157 aaKnown RBP10.36□□□□□ -0.75
SH3TC1-225ENST00000515682 MUSTN1Q8IVN3 82 aa10.36□□□□□ -0.75
SH3TC1-225ENST00000515682 TMEM141Q96I45 108 aa10.36□□□□□ -0.75
SH3TC1-225ENST00000515682 PIFOQ8TCI5 191 aa10.36□□□□□ -0.75
SH3TC1-225ENST00000515682 PHLDA1Q8WV24 401 aaPredicted RBP10.36□□□□□ -0.75
SH3TC1-225ENST00000515682 ZMAT4Q9H898 229 aa10.36□□□□□ -0.75
SH3TC1-225ENST00000515682 A0A0J9YXV3 536 aa10.36□□□□□ -0.75
SH3TC1-225ENST00000515682 CDSNQ15517 529 aa10.36□□□□□ -0.75
SH3TC1-225ENST00000515682 SPINK13Q1W4C9 94 aa10.35□□□□□ -0.75
SH3TC1-225ENST00000515682 ATP6V0E2Q8NHE4 81 aa10.35□□□□□ -0.75
SH3TC1-225ENST00000515682 SUMO4Q6EEV6 95 aa10.35□□□□□ -0.75
SH3TC1-225ENST00000515682 MORN3Q6PF18 240 aaPredicted RBP10.35□□□□□ -0.75
SH3TC1-225ENST00000515682 C10orf105Q8TEF2 133 aa10.35□□□□□ -0.75
SH3TC1-225ENST00000515682 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
SH3TC1-225ENST00000515682 ZFP36P26651 326 aaKnown RBP10.34□□□□□ -0.75
SH3TC1-225ENST00000515682 DEFB113Q30KQ7 82 aa10.34□□□□□ -0.75
SH3TC1-225ENST00000515682 SRSF2Q01130 221 aaKnown RBP10.34□□□□□ -0.75
SH3TC1-225ENST00000515682 IGHV7-4-1A0A0J9YVY3 117 aa10.34□□□□□ -0.75
SH3TC1-225ENST00000515682 DUX3Q96PT4 197 aa10.34□□□□□ -0.75
SH3TC1-225ENST00000515682 A0A0J9YY99 117 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 CCDC140Q96MF4 163 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 LY6LH3BQJ8 138 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 LINC01620Q4KN68 170 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 PRR9Q5T870 116 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 Q6ZS46 218 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 NDUFA12Q9UI09 145 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 UNQ9165/PRO28630Q6UXU0 137 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 NFE4Q86UQ8 179 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 ZNF843Q8N446 348 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 CNFNQ9BYD5 112 aa10.33□□□□□ -0.76
SH3TC1-225ENST00000515682 MTORP42345 2549 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms