RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 MBD3L1Q8WWY6 194 aa9.19□□□□□ -0.94
TCOF1-215ENST00000515516 TM2D2Q9BX73 214 aa9.19□□□□□ -0.94
TCOF1-215ENST00000515516 SAMD10Q9BYL1 202 aa9.19□□□□□ -0.94
TCOF1-215ENST00000515516 JPT2Q9H910 190 aa9.19□□□□□ -0.94
TCOF1-215ENST00000515516 H2AFB1P0C5Y9 115 aa9.18□□□□□ -0.94
TCOF1-215ENST00000515516 GCSHP23434 173 aa9.18□□□□□ -0.94
TCOF1-215ENST00000515516 C14orf178Q8N769 122 aaPredicted RBP9.18□□□□□ -0.94
TCOF1-215ENST00000515516 DNAH5Q8TE73 4624 aa9.18□□□□□ -0.94
TCOF1-215ENST00000515516 SFRP2Q96HF1 295 aa9.18□□□□□ -0.94
TCOF1-215ENST00000515516 A0A087WWL8 130 aa9.17□□□□□ -0.94
TCOF1-215ENST00000515516 IGLV5-52A0A0A0MRZ9 124 aa9.17□□□□□ -0.94
TCOF1-215ENST00000515516 LAGE3Q14657 143 aa9.17□□□□□ -0.94
TCOF1-215ENST00000515516 TOR2AQ5JU69 321 aa9.17□□□□□ -0.94
TCOF1-215ENST00000515516 UFSP1Q6NVU6 142 aa9.17□□□□□ -0.94
TCOF1-215ENST00000515516 NTN5Q8WTR8 489 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-215ENST00000515516 URGCP-MRPS24S4R325 110 aa9.17□□□□□ -0.94
TCOF1-215ENST00000515516 TRAV8-3A0A0A6YYJ7 113 aa9.16□□□□□ -0.94
TCOF1-215ENST00000515516 EPM2AB3EWF7 344 aa9.16□□□□□ -0.94
TCOF1-215ENST00000515516 BAGE2Q86Y30 109 aa9.16□□□□□ -0.94
TCOF1-215ENST00000515516 SCO2A0A1W2PP80 73 aa9.15□□□□□ -0.94
TCOF1-215ENST00000515516 LRCOL1A6NCL2 159 aa9.15□□□□□ -0.94
TCOF1-215ENST00000515516 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
TCOF1-215ENST00000515516 KRTAP10-1P60331 282 aa9.15□□□□□ -0.94
TCOF1-215ENST00000515516 KCNIP4Q6PIL6 250 aa9.15□□□□□ -0.94
TCOF1-215ENST00000515516 TMUB2Q71RG4 321 aa9.15□□□□□ -0.94
TCOF1-215ENST00000515516 TRBV10-1A0A0K0K1A3 114 aa9.14□□□□□ -0.95
TCOF1-215ENST00000515516 TEX46H3BTG2 121 aa9.14□□□□□ -0.95
TCOF1-215ENST00000515516 RPL36AP83881 106 aaKnown RBP9.14□□□□□ -0.95
TCOF1-215ENST00000515516 EIF5AL1Q6IS14 154 aaKnown RBP9.14□□□□□ -0.95
TCOF1-215ENST00000515516 Q8N814 137 aa9.14□□□□□ -0.95
TCOF1-215ENST00000515516 RPL36ALQ969Q0 106 aaKnown RBP9.14□□□□□ -0.95
TCOF1-215ENST00000515516 APOBP04114 4563 aaKnown RBP9.14□□□□□ -0.95
TCOF1-215ENST00000515516 CXCL1P09341 107 aa9.13□□□□□ -0.95
TCOF1-215ENST00000515516 RAB5CP51148 216 aa9.13□□□□□ -0.95
TCOF1-215ENST00000515516 PRR27Q6MZM9 219 aa9.13□□□□□ -0.95
TCOF1-215ENST00000515516 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.13□□□□□ -0.95
TCOF1-215ENST00000515516 RMI2Q96E14 147 aa9.13□□□□□ -0.95
TCOF1-215ENST00000515516 MANBALQ9NQG1 85 aa9.13□□□□□ -0.95
TCOF1-215ENST00000515516 GNG13Q9P2W3 67 aa9.13□□□□□ -0.95
TCOF1-215ENST00000515516 Q9UF83 564 aa9.13□□□□□ -0.95
TCOF1-215ENST00000515516 COX11Q9Y6N1 276 aa9.13□□□□□ -0.95
TCOF1-215ENST00000515516 ABCA13Q86UQ4 5058 aa9.12□□□□□ -0.95
TCOF1-215ENST00000515516 A0A087WX48 190 aa9.12□□□□□ -0.95
TCOF1-215ENST00000515516 XGP55808 180 aa9.12□□□□□ -0.95
TCOF1-215ENST00000515516 RAB4BP61018 213 aa9.12□□□□□ -0.95
TCOF1-215ENST00000515516 ELOBQ15370 118 aa9.12□□□□□ -0.95
TCOF1-215ENST00000515516 SPANXN1Q5VSR9 72 aa9.12□□□□□ -0.95
TCOF1-215ENST00000515516 DAZ4Q86SG3 579 aaKnown RBP9.12□□□□□ -0.95
TCOF1-215ENST00000515516 FRZBQ92765 325 aa9.12□□□□□ -0.95
TCOF1-215ENST00000515516 MLST8Q9BVC4 326 aa9.12□□□□□ -0.95
TCOF1-215ENST00000515516 DAZ3Q9NR90 486 aaKnown RBP9.12□□□□□ -0.95
TCOF1-215ENST00000515516 TRBV7-3A0A075B6L6 115 aa9.11□□□□□ -0.95
TCOF1-215ENST00000515516 RPL35P42766 123 aaKnown RBP9.11□□□□□ -0.95
TCOF1-215ENST00000515516 RPL19P84098 196 aaKnown RBP9.11□□□□□ -0.95
TCOF1-215ENST00000515516 ZNF56Q15929 161 aa9.11□□□□□ -0.95
TCOF1-215ENST00000515516 Q8N3U1 123 aa9.11□□□□□ -0.95
TCOF1-215ENST00000515516 DAZAP1Q96EP5 407 aaKnown RBP9.11□□□□□ -0.95
TCOF1-215ENST00000515516 TMEM262E9PQX1 116 aa9.1□□□□□ -0.95
TCOF1-215ENST00000515516 F5H697 171 aa9.1□□□□□ -0.95
TCOF1-215ENST00000515516 SMIM17P0DL12 118 aa9.1□□□□□ -0.95
TCOF1-215ENST00000515516 SSTP61278 116 aa9.1□□□□□ -0.95
TCOF1-215ENST00000515516 NIT1Q86X76 327 aa9.1□□□□□ -0.95
TCOF1-215ENST00000515516 OR10AG1Q8NH19 301 aa9.1□□□□□ -0.95
TCOF1-215ENST00000515516 TRAV1-1A0A0B4J248 108 aa9.09□□□□□ -0.95
TCOF1-215ENST00000515516 UBE2D3P61077 147 aa9.09□□□□□ -0.95
TCOF1-215ENST00000515516 UBE2D2P62837 147 aa9.09□□□□□ -0.95
TCOF1-215ENST00000515516 TMEM70Q9BUB7 260 aa9.09□□□□□ -0.95
TCOF1-215ENST00000515516 CHCHD7Q9BUK0 85 aa9.09□□□□□ -0.95
TCOF1-215ENST00000515516 KLK12Q9UKR0 248 aa9.09□□□□□ -0.95
TCOF1-215ENST00000515516 IGKV2D-24A0A075B6R9 120 aa9.08□□□□□ -0.96
TCOF1-215ENST00000515516 MUC21A0A0G2JKD1 596 aa9.08□□□□□ -0.96
TCOF1-215ENST00000515516 MUC21A0A140T8X8 626 aa9.08□□□□□ -0.96
TCOF1-215ENST00000515516 SNAI2O43623 268 aa9.08□□□□□ -0.96
TCOF1-215ENST00000515516 IFNA1P01562 189 aa9.08□□□□□ -0.96
TCOF1-215ENST00000515516 OR5AL1P0C617 328 aa9.08□□□□□ -0.96
TCOF1-215ENST00000515516 CCL20P78556 96 aa9.08□□□□□ -0.96
TCOF1-215ENST00000515516 OR10G8Q8NGN5 311 aa9.08□□□□□ -0.96
TCOF1-215ENST00000515516 SSBP4Q9BWG4 385 aaPredicted RBP9.08□□□□□ -0.96
TCOF1-215ENST00000515516 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
TCOF1-215ENST00000515516 LECT2O14960 151 aa9.07□□□□□ -0.96
TCOF1-215ENST00000515516 INAFM2P0DMQ5 153 aa9.07□□□□□ -0.96
TCOF1-215ENST00000515516 RPS20P60866 119 aaKnown RBP9.07□□□□□ -0.96
TCOF1-215ENST00000515516 CENPWQ5EE01 88 aa9.07□□□□□ -0.96
TCOF1-215ENST00000515516 Q5VSD8 79 aa9.07□□□□□ -0.96
TCOF1-215ENST00000515516 C11orf52Q96A22 123 aa9.07□□□□□ -0.96
TCOF1-215ENST00000515516 UBE2WQ96B02 151 aa9.07□□□□□ -0.96
TCOF1-215ENST00000515516 TPPP3Q9BW30 176 aa9.07□□□□□ -0.96
TCOF1-215ENST00000515516 TRBV6-8A0A0A6YYG3 113 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 XKRY2A2RUG3 117 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 RBFOX3A6NFN3 312 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 PDE6DO43924 150 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 SMR3BP02814 79 aaPredicted RBP9.06□□□□□ -0.96
TCOF1-215ENST00000515516 GNG4P50150 75 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 SULT1A2P50226 295 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 PKIAP61925 76 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 Q0VG73 95 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 TMEM97Q5BJF2 176 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 Q8N976 141 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 NEXN-AS1Q8NBZ9 246 aa9.06□□□□□ -0.96
TCOF1-215ENST00000515516 BAALCQ8WXS3 180 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms