RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 ZNF462Q96JM2 2506 aa5.29□□□□□ -1.56
NIPBL-208ENST00000514335 TRAV13-2A0A0B4J235 113 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 E7EQL1 145 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 SH2D1AO60880 128 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 HELZ2Q9BYK8 2649 aaKnown RBP5.28□□□□□ -1.56
NIPBL-208ENST00000514335 INTS1Q8N201 2190 aaKnown RBP5.28□□□□□ -1.56
NIPBL-208ENST00000514335 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.28□□□□□ -1.56
NIPBL-208ENST00000514335 IGKV1-12A0A0C4DH73 117 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 IGKV1D-12P01611 117 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 IFI6P09912 130 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 CFC1BP0CG36 223 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 CFC1P0CG37 223 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 PRR3P79522 188 aaKnown RBP5.28□□□□□ -1.56
NIPBL-208ENST00000514335 KLKP1Q107X0 134 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 SPTSSBQ8NFR3 76 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 DEC1Q9P2X7 70 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 TAC3Q9UHF0 121 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 SPAG17Q6Q759 2223 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 DSCAMO60469 2012 aa5.28□□□□□ -1.56
NIPBL-208ENST00000514335 PSPHP1O15172 72 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 SPINK2P20155 84 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 ATP5EP56381 51 aaPredicted RBP5.27□□□□□ -1.57
NIPBL-208ENST00000514335 RIGQ13278 110 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 TXNDC17Q9BRA2 123 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 DYNLRB1Q9NP97 96 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 MED12Q93074 2177 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 FGF22Q9HCT0 170 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 ZNF355PQ9NSJ1 428 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 SPRR3Q9UBC9 169 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 TIMM9Q9Y5J7 89 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 MUC4Q99102 2169 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 FXYD7P58549 80 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 SYCNQ0VAF6 134 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 KIAA0087Q14695 138 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 C15orf32Q32M92 178 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 C18orf65Q6ZTR6 163 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 RMI2Q96E14 147 aa5.27□□□□□ -1.57
NIPBL-208ENST00000514335 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 HIGD1CA8MV81 97 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 C12orf77C9JDV5 145 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 BAALC-AS2P0C853 105 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 KRTAP27-1Q3LI81 207 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 ZNF497Q6ZNH5 498 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 PRO1854Q9UHT4 67 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 SNURFQ9Y675 71 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 LHFPL6Q9Y693 200 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 ZNF407Q9C0G0 2248 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 LINC00473A8K010 186 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 C17orf82Q86X59 251 aaPredicted RBP5.26□□□□□ -1.57
NIPBL-208ENST00000514335 FAM218AQ96MZ4 157 aa5.26□□□□□ -1.57
NIPBL-208ENST00000514335 ZGRF1Q86YA3 2104 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 TRIOO75962 3097 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 C16orf90A8MZG2 172 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 COX7A2P2O60397 106 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 PRB1P04280 392 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 CKS2P33552 79 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 LPAL2Q16609 132 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 Q1T7F1 81 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 Q6ZRP5 223 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 DYNAPQ8N1N2 210 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 FAM30AQ9NZY2 134 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 USP9XQ93008 2570 aaPredicted RBP5.25□□□□□ -1.57
NIPBL-208ENST00000514335 FREM1Q5H8C1 2179 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 IGLV3-12A0A075B6K2 115 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 FOLR3P41439 243 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 ZNF137PP52743 207 aa5.25□□□□□ -1.57
NIPBL-208ENST00000514335 CNOT1A5YKK6 2376 aaKnown RBP5.25□□□□□ -1.57
NIPBL-208ENST00000514335 DSCAML1Q8TD84 2053 aa5.24□□□□□ -1.57
NIPBL-208ENST00000514335 IGHV6-1A0A0B4J1U7 121 aa5.24□□□□□ -1.57
NIPBL-208ENST00000514335 A0A1B0GVT2 93 aa5.24□□□□□ -1.57
NIPBL-208ENST00000514335 IGLV2-8P01709 118 aa5.24□□□□□ -1.57
NIPBL-208ENST00000514335 UBE2AP49459 152 aa5.24□□□□□ -1.57
NIPBL-208ENST00000514335 SUMO2P61956 95 aaKnown RBP5.24□□□□□ -1.57
NIPBL-208ENST00000514335 C2orf83Q53S99 150 aa5.24□□□□□ -1.57
NIPBL-208ENST00000514335 LINC00269Q8N2A0 174 aa5.24□□□□□ -1.57
NIPBL-208ENST00000514335 UBE2D4Q9Y2X8 147 aa5.24□□□□□ -1.57
NIPBL-208ENST00000514335 RPS21P63220 83 aaKnown RBP5.24□□□□□ -1.57
NIPBL-208ENST00000514335 TWIST1Q15672 202 aa5.24□□□□□ -1.57
NIPBL-208ENST00000514335 CHCHD10Q8WYQ3 142 aaPredicted RBP5.24□□□□□ -1.57
NIPBL-208ENST00000514335 DNAH14Q0VDD8 3507 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 IGHV1OR21-1A0A087WYE8 117 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 H7C2G1 150 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 ARL14EPLP0DKL9 152 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 TIMM21Q9BVV7 248 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 SDK2Q58EX2 2172 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 IGHV1-69DA0A0B4J2H0 117 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 IGHV5-10-1A0A0J9YXX1 117 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 ATP11AUNQ6ZP68 121 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 CELA1Q9UNI1 258 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 PI4KAP42356 2102 aa5.23□□□□□ -1.57
NIPBL-208ENST00000514335 IGF2RP11717 2491 aa5.22□□□□□ -1.57
NIPBL-208ENST00000514335 CACNA1CQ13936 2221 aa5.22□□□□□ -1.57
NIPBL-208ENST00000514335 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
NIPBL-208ENST00000514335 IGHV3-33P01772 117 aa5.22□□□□□ -1.57
NIPBL-208ENST00000514335 HMGN2P05204 90 aaKnown RBP5.22□□□□□ -1.57
NIPBL-208ENST00000514335 RPS18P62269 152 aaKnown RBP5.22□□□□□ -1.57
NIPBL-208ENST00000514335 BSPH1Q075Z2 132 aa5.22□□□□□ -1.57
NIPBL-208ENST00000514335 SVILO95425 2214 aa5.22□□□□□ -1.57
NIPBL-208ENST00000514335 TET2Q6N021 2002 aaPredicted RBP5.22□□□□□ -1.57
NIPBL-208ENST00000514335 MYO15AQ9UKN7 3530 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms