RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 LINC00588Q9Y4M8 146 aa1.87□□□□□ -2.11
CALCOCO2-223ENST00000514267 LINC00312Q9Y6C7 94 aa1.87□□□□□ -2.11
CALCOCO2-223ENST00000514267 CACNA1GO43497 2377 aa1.87□□□□□ -2.11
CALCOCO2-223ENST00000514267 KNTC1P50748 2209 aa1.87□□□□□ -2.11
CALCOCO2-223ENST00000514267 URB1O60287 2271 aaKnown RBP1.87□□□□□ -2.11
CALCOCO2-223ENST00000514267 PCNX2A6NKB5 2137 aa1.87□□□□□ -2.11
CALCOCO2-223ENST00000514267 KIAA2026Q5HYC2 2103 aa1.87□□□□□ -2.11
CALCOCO2-223ENST00000514267 HEATR1Q9H583 2144 aaKnown RBP1.87□□□□□ -2.11
CALCOCO2-223ENST00000514267 PTPRBP23467 1997 aa1.87□□□□□ -2.11
CALCOCO2-223ENST00000514267 A0A0B4J2C4 111 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 OR11H12B2RN74 326 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST1H2BKO60814 126 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 IGKV1-16P04430 117 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST1H2BJP06899 126 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 TRGC1P0CF51 173 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 SMIM6P0DI80 62 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 SAA1P0DJI8 122 aaPredicted RBP1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 APELAP0DMC3 54 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 DEFA4P12838 97 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 FABP4P15090 132 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST1H2BOP23527 126 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 COL8A2P25067 703 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 GCHFRP30047 84 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST1H2BBP33778 126 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 ATP5G3P48201 142 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST1H2BDP58876 126 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 UBE2G1P62253 170 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST1H2BCP62807 126 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HERVK_113P63121 156 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 DEFA6Q01524 100 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 PRB3Q04118 309 aaPredicted RBP1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HES1Q14469 280 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST2H2BEQ16778 126 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 C10orf113Q5VZT2 155 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HCP5Q6MZN7 132 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 CYP2G1PQ6ZSU1 146 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 MIR17HGQ75NE6 70 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 DEFB125Q8N687 156 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 ZNF439Q8NDP4 499 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 OR11H1Q8NG94 326 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 OR8B3Q8NGG8 313 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 OR10D4PQ8NGN7 298 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 OR11H2Q8NH07 326 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST1H2BHQ93079 126 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 OR8B2Q96RD0 313 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST1H2BNQ99877 126 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 HIST1H2BMQ99879 126 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 LCE3DQ9BYE3 92 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 TMEM133Q9H2Q1 129 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 TMEM14BQ9NUH8 114 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 TMEM242Q9NWH2 141 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 BET1LQ9NYM9 111 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 FUT9Q9Y231 359 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 AMMECR1Q9Y4X0 333 aaPredicted RBP1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 MUC3AQ02505 3323 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 SHANK1Q9Y566 2161 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 CHD8Q9HCK8 2581 aa1.86□□□□□ -2.11
CALCOCO2-223ENST00000514267 PIEZO1Q92508 2521 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 SPENQ96T58 3664 aaKnown RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 CHD3Q12873 2000 aaKnown RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 TRAV5A0A0B4J249 113 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 TCRBV4S1A1TA0A5B7 111 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 A6NED7 52 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 ZNF705FA8MVS1 300 aaPredicted RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 FNDC10F2Z333 226 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 SPINK4O60575 86 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 RBP4P02753 201 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 SLC25A5P05141 298 aaKnown RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 CRYGDP07320 174 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 CD7P09564 240 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 OR10J4P0C629 311 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 NBEAP1P0C6P0 100 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 ZNF705DP0CH99 300 aaPredicted RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 ZNF705BP0CI00 300 aaPredicted RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 RNASE2P10153 161 aaKnown RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 FGF6P10767 208 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 CRYBB3P26998 211 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 CA7P43166 264 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 RPL27AP46776 148 aaKnown RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 UBE2L3P68036 154 aaKnown RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 DIAPH2-AS1Q14236 149 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 C1orf194Q5T5A4 169 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 AMMECR1LQ6DCA0 310 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 LINC00305Q7Z4B0 112 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 ADM2Q7Z4H4 148 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 BAGE3Q86Y29 109 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 BAGE2Q86Y30 109 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 LINC00311Q8N616 119 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 ANKRD29Q8N6D5 301 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 ZFAND2AQ8N6M9 145 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 SGMS2Q8NHU3 365 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 TMEM167AQ8TBQ9 72 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 IMMP2LQ96T52 175 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 DERL1Q9BUN8 251 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 MRPL32Q9BYC8 188 aaKnown RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 NDUFA4L2Q9NRX3 87 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 MRPS16Q9Y3D3 137 aaKnown RBP1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 U3KQK5 164 aa1.85□□□□□ -2.11
CALCOCO2-223ENST00000514267 PRRC2CQ9Y520 2896 aaKnown RBP1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms