RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 TIRAPP58753 221 aa5.9□□□□□ -1.46
HERC4-214ENST00000513996 PIK3CD-AS1Q5SR53 167 aa5.9□□□□□ -1.46
HERC4-214ENST00000513996 SPATA12Q7Z6I5 190 aa5.9□□□□□ -1.46
HERC4-214ENST00000513996 TCEAL7Q9BRU2 100 aa5.9□□□□□ -1.46
HERC4-214ENST00000513996 PRADC1Q9BSG0 188 aa5.9□□□□□ -1.46
HERC4-214ENST00000513996 TRAV1-1A0A0B4J248 108 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 A8MWV9 139 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 CRYGDP07320 174 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 FUSP35637 526 aaKnown RBP eCLIP5.89□□□□□ -1.472e-6■■■■□ 19.5
HERC4-214ENST00000513996 SULT1A2P50226 295 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 RPL19P84098 196 aaKnown RBP5.89□□□□□ -1.47
HERC4-214ENST00000513996 RHOHQ15669 191 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 ZFP2Q6ZN57 461 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 SH2D6Q7Z4S9 175 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 BAGE2Q86Y30 109 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 C14orf178Q8N769 122 aaPredicted RBP5.89□□□□□ -1.47
HERC4-214ENST00000513996 KRTAP4-5Q9BYR2 181 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 LY96Q9Y6Y9 160 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 DNAH5Q8TE73 4624 aa5.89□□□□□ -1.47
HERC4-214ENST00000513996 GAGE12JA6NER3 117 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 S100A9P06702 114 aaKnown RBP5.88□□□□□ -1.47
HERC4-214ENST00000513996 LINC00694P0DN24 101 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 MGST1P10620 155 aaKnown RBP5.88□□□□□ -1.47
HERC4-214ENST00000513996 GAGE1Q13065 139 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 GAGE4Q13068 117 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 GAGE5Q13069 117 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 GAGE13Q4V321 117 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 ATP6V0E2Q8NHE4 81 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 SFRP2Q96HF1 295 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 DERL1Q9BUN8 251 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 GTSF1LQ9H1H1 148 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 MSRB1Q9NZV6 116 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 GNG13Q9P2W3 67 aa5.88□□□□□ -1.47
HERC4-214ENST00000513996 APOBP04114 4563 aaKnown RBP5.87□□□□□ -1.47
HERC4-214ENST00000513996 TRAV9-2A0A087WT02 112 aa5.87□□□□□ -1.47
HERC4-214ENST00000513996 A0A087WWL8 130 aa5.87□□□□□ -1.47
HERC4-214ENST00000513996 IGHV3-38A0A0C4DH36 116 aa5.87□□□□□ -1.47
HERC4-214ENST00000513996 IGLV2-8P01709 118 aa5.87□□□□□ -1.47
HERC4-214ENST00000513996 EVI2AP22794 236 aa5.87□□□□□ -1.47
HERC4-214ENST00000513996 RPL35P42766 123 aaKnown RBP5.87□□□□□ -1.47
HERC4-214ENST00000513996 RAB5CP51148 216 aa5.87□□□□□ -1.47
HERC4-214ENST00000513996 LELP1Q5T871 98 aa5.87□□□□□ -1.47
HERC4-214ENST00000513996 C11orf52Q96A22 123 aa5.87□□□□□ -1.47
HERC4-214ENST00000513996 PHLDA3Q9Y5J5 127 aa5.87□□□□□ -1.47
HERC4-214ENST00000513996 A0A087WTM6 91 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 MUC21A0A0G2JKD1 596 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 MUC21A0A140T8X8 626 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 RAB19A4D1S5 217 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 M0R381 172 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 LINC01556Q5JQF7 62 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 OR10J3Q5JRS4 329 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 FAM74A4Q5TZK3 123 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 SYT8Q8NBV8 401 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 OR10AG1Q8NH19 301 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 MANBALQ9NQG1 85 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 PCLOQ9Y6V0 5065 aa5.86□□□□□ -1.47
HERC4-214ENST00000513996 TRAV8-6A0A0B4J262 113 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 IBA57-AS1B1ANH7 110 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 ZNF561-AS1K7EIQ3 104 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 K7EP13 123 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 SNAI2O43623 268 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 IGHV3-30P01768 117 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 IGHV3-33P01772 117 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 CXCL1P09341 107 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 IGHV3-30-3P0DP02 117 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 IGHV3-30-5P0DP03 117 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 RAB14P61106 215 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 NDUFA5Q16718 116 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 CLLU1Q5K131 121 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 PRR27Q6MZM9 219 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 NFE4Q86UQ8 179 aa5.85□□□□□ -1.47
HERC4-214ENST00000513996 TRBV20OR9-2A0A075B6H5 130 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 RHODO00212 210 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 CDK2AP2O75956 126 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 GZMBP10144 247 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 SSTP61278 116 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 CENPWQ5EE01 88 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 ALKAL2Q6UX46 152 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 ZFP82Q8N141 532 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 C10orf126Q8N4M7 172 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 KRTAP9-2Q9BYQ4 174 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 MED9Q9NWA0 146 aa5.84□□□□□ -1.47
HERC4-214ENST00000513996 C19orf71A6NCJ1 209 aa5.83□□□□□ -1.48
HERC4-214ENST00000513996 LRCOL1A6NCL2 159 aa5.83□□□□□ -1.48
HERC4-214ENST00000513996 RBFOX3A6NFN3 312 aa5.83□□□□□ -1.48
HERC4-214ENST00000513996 OR5AL1P0C617 328 aa5.83□□□□□ -1.48
HERC4-214ENST00000513996 BCL2P10415 239 aa5.83□□□□□ -1.48
HERC4-214ENST00000513996 BLOC1S1P78537 153 aa5.83□□□□□ -1.48
HERC4-214ENST00000513996 MEF2BQ02080 365 aaPredicted RBP5.83□□□□□ -1.48
HERC4-214ENST00000513996 DAZ4Q86SG3 579 aaKnown RBP5.83□□□□□ -1.48
HERC4-214ENST00000513996 LYPD6BQ8NI32 183 aa5.83□□□□□ -1.48
HERC4-214ENST00000513996 DAZ3Q9NR90 486 aaKnown RBP5.83□□□□□ -1.48
HERC4-214ENST00000513996 AP5S1Q9NUS5 200 aa5.83□□□□□ -1.48
HERC4-214ENST00000513996 KIF25-AS1Q9Y6Z4 181 aa5.83□□□□□ -1.48
HERC4-214ENST00000513996 ABCA13Q86UQ4 5058 aa5.82□□□□□ -1.48
HERC4-214ENST00000513996 LINC00862A6NCI5 91 aa5.82□□□□□ -1.48
HERC4-214ENST00000513996 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
HERC4-214ENST00000513996 TEX46H3BTG2 121 aa5.82□□□□□ -1.48
HERC4-214ENST00000513996 IGLC6P0CF74 106 aa5.82□□□□□ -1.48
HERC4-214ENST00000513996 ERVFC1-1P60608 527 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms