RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 RBMY1BA6NDE4 496 aaKnown RBP12.18□□□□□ -0.46
HMGCL-209ENST00000513148 RBMY1EA6NEQ0 496 aaKnown RBP12.18□□□□□ -0.46
HMGCL-209ENST00000513148 A8MZ25 164 aa12.18□□□□□ -0.46
HMGCL-209ENST00000513148 P01737 135 aa12.18□□□□□ -0.46
HMGCL-209ENST00000513148 RBMY1DP0C7P1 496 aaKnown RBP12.18□□□□□ -0.46
HMGCL-209ENST00000513148 PYYP10082 97 aa12.18□□□□□ -0.46
HMGCL-209ENST00000513148 ID1P41134 155 aa12.18□□□□□ -0.46
HMGCL-209ENST00000513148 GTSF1Q8WW33 167 aa12.18□□□□□ -0.46
HMGCL-209ENST00000513148 KNCNA6PVL3 124 aa12.17□□□□□ -0.46
HMGCL-209ENST00000513148 DEFB1P60022 68 aa12.17□□□□□ -0.46
HMGCL-209ENST00000513148 RNF182Q8N6D2 247 aa12.17□□□□□ -0.46
HMGCL-209ENST00000513148 B9D2Q9BPU9 175 aa12.17□□□□□ -0.46
HMGCL-209ENST00000513148 GTSF1LQ9H1H1 148 aa12.17□□□□□ -0.46
HMGCL-209ENST00000513148 A6NJY4 79 aa12.16□□□□□ -0.46
HMGCL-209ENST00000513148 LTAP01374 205 aa12.16□□□□□ -0.46
HMGCL-209ENST00000513148 RPL35AP18077 110 aaKnown RBP12.16□□□□□ -0.46
HMGCL-209ENST00000513148 RPL24P83731 157 aaKnown RBP12.16□□□□□ -0.46
HMGCL-209ENST00000513148 SBSPONQ8IVN8 264 aa12.16□□□□□ -0.46
HMGCL-209ENST00000513148 C20orf173Q96LM9 149 aa12.16□□□□□ -0.46
HMGCL-209ENST00000513148 PRB4P10163 310 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-209ENST00000513148 SMAGPQ0VAQ4 97 aa12.16□□□□□ -0.46
HMGCL-209ENST00000513148 MRAP2Q96G30 205 aa12.16□□□□□ -0.46
HMGCL-209ENST00000513148 HLA-DMBP28068 263 aa12.15□□□□□ -0.46
HMGCL-209ENST00000513148 CKS1BP61024 79 aa12.15□□□□□ -0.46
HMGCL-209ENST00000513148 FXYD5Q96DB9 178 aa12.15□□□□□ -0.46
HMGCL-209ENST00000513148 AGRNO00468 2067 aa12.15□□□□□ -0.46
HMGCL-209ENST00000513148 TRAV8-2A0A0B4J237 113 aa12.15□□□□□ -0.47
HMGCL-209ENST00000513148 TRBV6-1A0A0K0K1D8 114 aa12.15□□□□□ -0.47
HMGCL-209ENST00000513148 CFAP161Q6P656 301 aa12.15□□□□□ -0.47
HMGCL-209ENST00000513148 STHQ8IWL8 128 aa12.15□□□□□ -0.47
HMGCL-209ENST00000513148 DAZAP1Q96EP5 407 aaKnown RBP12.15□□□□□ -0.47
HMGCL-209ENST00000513148 ZC2HC1AQ96GY0 325 aa12.15□□□□□ -0.47
HMGCL-209ENST00000513148 TMEM14CQ9P0S9 112 aa12.15□□□□□ -0.47
HMGCL-209ENST00000513148 PGLYRP4Q96LB8 373 aa12.14□□□□□ -0.47
HMGCL-209ENST00000513148 SPANXB1Q9NS25 103 aaPredicted RBP12.14□□□□□ -0.47
HMGCL-209ENST00000513148 F6UB75 175 aa12.13□□□□□ -0.47
HMGCL-209ENST00000513148 LINC00322Q6ZN03 302 aaPredicted RBP12.13□□□□□ -0.47
HMGCL-209ENST00000513148 COL7A1Q02388 2944 aa12.13□□□□□ -0.47
HMGCL-209ENST00000513148 RIGQ13278 110 aa12.13□□□□□ -0.47
HMGCL-209ENST00000513148 TRBV19A0A075B6N1 114 aa12.12□□□□□ -0.47
HMGCL-209ENST00000513148 Q6AWC8 147 aa12.12□□□□□ -0.47
HMGCL-209ENST00000513148 SLC50A1Q9BRV3 221 aa12.12□□□□□ -0.47
HMGCL-209ENST00000513148 TGP01266 2768 aa12.12□□□□□ -0.47
HMGCL-209ENST00000513148 A0A1B0GUT8 65 aa12.11□□□□□ -0.47
HMGCL-209ENST00000513148 HLA-DRB4P13762 266 aa12.11□□□□□ -0.47
HMGCL-209ENST00000513148 HLA-DRB4X5D2U9 266 aa12.11□□□□□ -0.47
HMGCL-209ENST00000513148 SNAI2O43623 268 aa12.11□□□□□ -0.47
HMGCL-209ENST00000513148 NCR2O95944 276 aa12.11□□□□□ -0.47
HMGCL-209ENST00000513148 IGKV3-20P01619 116 aa12.11□□□□□ -0.47
HMGCL-209ENST00000513148 LINC01559Q495D7 138 aa12.11□□□□□ -0.47
HMGCL-209ENST00000513148 PRSS3P2Q8NHM4 247 aa12.11□□□□□ -0.47
HMGCL-209ENST00000513148 TM2D2Q9BX73 214 aa12.11□□□□□ -0.47
HMGCL-209ENST00000513148 E9PLD3 99 aa12.1□□□□□ -0.47
HMGCL-209ENST00000513148 SLC25A5P05141 298 aaKnown RBP12.1□□□□□ -0.47
HMGCL-209ENST00000513148 APOC4P55056 127 aa12.1□□□□□ -0.47
HMGCL-209ENST00000513148 ZNF493Q6ZR52 646 aa12.1□□□□□ -0.47
HMGCL-209ENST00000513148 PHLDA1Q8WV24 401 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-209ENST00000513148 U3KQK5 164 aa12.1□□□□□ -0.47
HMGCL-209ENST00000513148 TRPT1Q86TN4 253 aaKnown RBP12.1□□□□□ -0.47
HMGCL-209ENST00000513148 RAB37Q96AX2 223 aa12.1□□□□□ -0.47
HMGCL-209ENST00000513148 RETNQ9HD89 108 aa12.1□□□□□ -0.47
HMGCL-209ENST00000513148 MRPL16Q9NX20 251 aaKnown RBP12.1□□□□□ -0.47
HMGCL-209ENST00000513148 H0Y8G0 127 aa12.09□□□□□ -0.47
HMGCL-209ENST00000513148 H3BMM0 161 aa12.09□□□□□ -0.47
HMGCL-209ENST00000513148 ZNF138P52744 262 aa12.09□□□□□ -0.47
HMGCL-209ENST00000513148 CRYBA4P53673 196 aa12.09□□□□□ -0.47
HMGCL-209ENST00000513148 EXOC3-AS1Q8N2X6 119 aa12.09□□□□□ -0.47
HMGCL-209ENST00000513148 PGPA6NDG6 321 aa12.08□□□□□ -0.48
HMGCL-209ENST00000513148 PDE6HQ13956 83 aa12.08□□□□□ -0.48
HMGCL-209ENST00000513148 TAL2Q16559 108 aa12.08□□□□□ -0.48
HMGCL-209ENST00000513148 NBEAL2Q6ZNJ1 2754 aa12.08□□□□□ -0.48
HMGCL-209ENST00000513148 TRAV26-1A0A087WT03 109 aa12.08□□□□□ -0.48
HMGCL-209ENST00000513148 A0A096LNJ9 63 aa12.08□□□□□ -0.48
HMGCL-209ENST00000513148 A0A0J9YX75 114 aa12.08□□□□□ -0.48
HMGCL-209ENST00000513148 OR11H2Q8NH07 326 aa12.08□□□□□ -0.48
HMGCL-209ENST00000513148 M0R3E3 92 aa12.07□□□□□ -0.48
HMGCL-209ENST00000513148 TCRAP04437 139 aa12.07□□□□□ -0.48
HMGCL-209ENST00000513148 DEFB135Q30KP9 77 aa12.07□□□□□ -0.48
HMGCL-209ENST00000513148 TM2D3Q9BRN9 247 aa12.07□□□□□ -0.48
HMGCL-209ENST00000513148 AAMDCQ9H7C9 122 aa12.07□□□□□ -0.48
HMGCL-209ENST00000513148 ZMAT4Q9H898 229 aa12.07□□□□□ -0.48
HMGCL-209ENST00000513148 DNAH9Q9NYC9 4486 aa12.06□□□□□ -0.48
HMGCL-209ENST00000513148 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-209ENST00000513148 KIR2DL5BQ8NHK3 375 aa12.06□□□□□ -0.48
HMGCL-209ENST00000513148 NAA38Q9BRA0 125 aaKnown RBP12.06□□□□□ -0.48
HMGCL-209ENST00000513148 PRAC2D3DTV9 90 aa12.06□□□□□ -0.48
HMGCL-209ENST00000513148 K7EQM0 130 aa12.06□□□□□ -0.48
HMGCL-209ENST00000513148 TSPAN13O95857 204 aa12.06□□□□□ -0.48
HMGCL-209ENST00000513148 HBDP02042 147 aa12.06□□□□□ -0.48
HMGCL-209ENST00000513148 FXYD7P58549 80 aa12.06□□□□□ -0.48
HMGCL-209ENST00000513148 GNG5P63218 68 aa12.06□□□□□ -0.48
HMGCL-209ENST00000513148 ATP6V0E2Q8NHE4 81 aa12.06□□□□□ -0.48
HMGCL-209ENST00000513148 NHLRC4P0CG21 123 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-209ENST00000513148 OR8A1Q8NGG7 326 aa12.05□□□□□ -0.48
HMGCL-209ENST00000513148 GEMIN7Q9H840 131 aaKnown RBP12.05□□□□□ -0.48
HMGCL-209ENST00000513148 IFI27L1Q96BM0 104 aa12.04□□□□□ -0.48
HMGCL-209ENST00000513148 Q9H3A6 140 aa12.04□□□□□ -0.48
HMGCL-209ENST00000513148 FBLL1A6NHQ2 334 aaKnown RBP12.04□□□□□ -0.48
HMGCL-209ENST00000513148 VCX2Q9H322 139 aa12.04□□□□□ -0.48
HMGCL-209ENST00000513148 TENM3Q9P273 2699 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms