RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MAPKAPK5-AS1Q8N8E1 139 aa7.55□□□□□ -1.2
PDLIM5-217ENST00000512274 OR10AG1Q8NH19 301 aa7.55□□□□□ -1.2
PDLIM5-217ENST00000512274 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
PDLIM5-217ENST00000512274 PRSS47A8MTI9 375 aa7.54□□□□□ -1.2
PDLIM5-217ENST00000512274 H3BVH4 76 aa7.54□□□□□ -1.2
PDLIM5-217ENST00000512274 S100A4P26447 101 aaKnown RBP7.54□□□□□ -1.2
PDLIM5-217ENST00000512274 SRIP30626 198 aa7.54□□□□□ -1.2
PDLIM5-217ENST00000512274 NDUFA6P56556 154 aa7.54□□□□□ -1.2
PDLIM5-217ENST00000512274 TWIST1Q15672 202 aa7.54□□□□□ -1.2
PDLIM5-217ENST00000512274 SMIM15Q7Z3B0 74 aa7.54□□□□□ -1.2
PDLIM5-217ENST00000512274 C18orf32Q8TCD1 76 aa7.54□□□□□ -1.2
PDLIM5-217ENST00000512274 AGRNO00468 2067 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 RBMY1A1P0DJD3 496 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 RBMY1CP0DJD4 496 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 RBMY1FQ15415 496 aaKnown RBP7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 SPANXN1Q5VSR9 72 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 ORMDL3Q8N138 153 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 RNF183Q96D59 192 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 MRAP2Q96G30 205 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 RNF185Q96GF1 192 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 AP1S3Q96PC3 154 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 SPXQ9BT56 116 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 TPPP3Q9BW30 176 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 PHLDA3Q9Y5J5 127 aa7.53□□□□□ -1.2
PDLIM5-217ENST00000512274 TRAV12-2A0A075B6T6 113 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 KIR2DL5BA0A0G2JN68 375 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 KIR2DL5BA0A0G2JPC4 375 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 LINC01546A6NGU7 62 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 J3KRW8 73 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 M0R381 172 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 GNRH2O43555 120 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 GIG44P09565 113 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 RAB4AP20338 218 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 LINC00310P59036 64 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 MUC21Q5SSG8 566 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 KIR2DL5AQ8N109 375 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 SYT8Q8NBV8 401 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 CSNK1G2-AS1Q8NCQ2 148 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 KIR2DL5BQ8NHK3 375 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 CHCHD1Q96BP2 118 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 DPH3P1Q9H4G8 78 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 NAGKQ9UJ70 344 aa7.52□□□□□ -1.21
PDLIM5-217ENST00000512274 IFITM10A6NMD0 228 aa7.51□□□□□ -1.21
PDLIM5-217ENST00000512274 PPP1R17O96001 155 aa7.51□□□□□ -1.21
PDLIM5-217ENST00000512274 IGKV3-20P01619 116 aa7.51□□□□□ -1.21
PDLIM5-217ENST00000512274 PMCHP20382 165 aa7.51□□□□□ -1.21
PDLIM5-217ENST00000512274 RPL32P62910 135 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-217ENST00000512274 MRPL51Q4U2R6 128 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-217ENST00000512274 AMN1Q8IY45 258 aa7.51□□□□□ -1.21
PDLIM5-217ENST00000512274 C11orf72Q8NBR9 251 aa7.51□□□□□ -1.21
PDLIM5-217ENST00000512274 MSRB1Q9NZV6 116 aa7.51□□□□□ -1.21
PDLIM5-217ENST00000512274 KIF25-AS1Q9Y6Z4 181 aa7.51□□□□□ -1.21
PDLIM5-217ENST00000512274 RTL8CO15255 209 aa7.5□□□□□ -1.21
PDLIM5-217ENST00000512274 SPRY2O43597 315 aa7.5□□□□□ -1.21
PDLIM5-217ENST00000512274 LINC00315P59091 139 aa7.5□□□□□ -1.21
PDLIM5-217ENST00000512274 ZNF415Q09FC8 603 aa7.5□□□□□ -1.21
PDLIM5-217ENST00000512274 KIAA1644Q3SXP7 199 aa7.5□□□□□ -1.21
PDLIM5-217ENST00000512274 ZNF705AQ6ZN79 300 aaPredicted RBP7.5□□□□□ -1.21
PDLIM5-217ENST00000512274 BAGE3Q86Y29 109 aa7.5□□□□□ -1.21
PDLIM5-217ENST00000512274 C1orf158Q8N1D5 194 aa7.5□□□□□ -1.21
PDLIM5-217ENST00000512274 TMEM18Q96B42 140 aa7.5□□□□□ -1.21
PDLIM5-217ENST00000512274 HIST1H2BLQ99880 126 aa7.5□□□□□ -1.21
PDLIM5-217ENST00000512274 K7EMI3 77 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 M0R2N4 97 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 M0R2P5 195 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 SERF1AO75920 110 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 EVI2AP22794 236 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 S100A2P29034 98 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 NANOS2P60321 138 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 DEFB135Q30KP9 77 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 LGALS9BQ3B8N2 356 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 RNASE8Q8TDE3 154 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 TMEM263Q8WUH6 116 aaKnown RBP7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 PRELID3AQ96N28 172 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 MDFICQ9P1T7 246 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 GOLT1BQ9Y3E0 138 aa7.49□□□□□ -1.21
PDLIM5-217ENST00000512274 CBY3A6NI87 242 aa7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 A8MWV9 139 aa7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 D6R8Y8 96 aa7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 CIDEAO60543 219 aa7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 SMIM6P0DI80 62 aa7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 RPL35AP18077 110 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 CKS2P33552 79 aa7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 DAZ2Q13117 558 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 RASL10AQ92737 203 aa7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 LINC01587Q99440 93 aa7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 C20orf78Q9BR46 151 aa7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 CSTL1Q9H114 145 aa7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 NXT2Q9NPJ8 142 aaKnown RBP7.48□□□□□ -1.21
PDLIM5-217ENST00000512274 TRBV6-5A0A0K0K1A5 114 aa7.47□□□□□ -1.21
PDLIM5-217ENST00000512274 SMIM9A6NGZ8 99 aa7.47□□□□□ -1.21
PDLIM5-217ENST00000512274 IGLL5B9A064 214 aa7.47□□□□□ -1.21
PDLIM5-217ENST00000512274 RHODO00212 210 aa7.47□□□□□ -1.21
PDLIM5-217ENST00000512274 LINC00614P0C842 121 aa7.47□□□□□ -1.21
PDLIM5-217ENST00000512274 NRACQ8N912 160 aa7.47□□□□□ -1.21
PDLIM5-217ENST00000512274 C16orf74Q96GX8 76 aa7.47□□□□□ -1.21
PDLIM5-217ENST00000512274 URB1-AS1Q96HZ7 61 aa7.47□□□□□ -1.21
PDLIM5-217ENST00000512274 XCL2Q9UBD3 114 aa7.47□□□□□ -1.21
PDLIM5-217ENST00000512274 APLNQ9ULZ1 77 aa7.47□□□□□ -1.21
PDLIM5-217ENST00000512274 MUC21A0A0G2JKD1 596 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms