RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 SFRP2Q96HF1 295 aa11.16□□□□□ -0.62
DDX41-213ENST00000512027 TEX46H3BTG2 121 aa11.15□□□□□ -0.62
DDX41-213ENST00000512027 IGLV2-8P01709 118 aa11.15□□□□□ -0.62
DDX41-213ENST00000512027 CRYGDP07320 174 aa11.15□□□□□ -0.62
DDX41-213ENST00000512027 MED14OSP0DP75 135 aa11.15□□□□□ -0.62
DDX41-213ENST00000512027 EVI2AP22794 236 aa11.15□□□□□ -0.62
DDX41-213ENST00000512027 FUSP35637 526 aaKnown RBP eCLIP11.15□□□□□ -0.62
DDX41-213ENST00000512027 TIRAPP58753 221 aa11.15□□□□□ -0.62
DDX41-213ENST00000512027 MEF2BQ02080 365 aaPredicted RBP11.15□□□□□ -0.62
DDX41-213ENST00000512027 ZFP82Q8N141 532 aa11.15□□□□□ -0.62
DDX41-213ENST00000512027 IGHV3-38A0A0C4DH36 116 aa11.14□□□□□ -0.63
DDX41-213ENST00000512027 BTF3P20290 206 aaKnown RBP11.14□□□□□ -0.63
DDX41-213ENST00000512027 NKX2-5P52952 324 aaPredicted RBP11.14□□□□□ -0.63
DDX41-213ENST00000512027 SSTP61278 116 aa11.14□□□□□ -0.63
DDX41-213ENST00000512027 ALKAL2Q6UX46 152 aa11.14□□□□□ -0.63
DDX41-213ENST00000512027 Q8N3U1 123 aa11.14□□□□□ -0.63
DDX41-213ENST00000512027 GTSF1LQ9H1H1 148 aa11.14□□□□□ -0.63
DDX41-213ENST00000512027 MSRB1Q9NZV6 116 aa11.14□□□□□ -0.63
DDX41-213ENST00000512027 APOBP04114 4563 aaKnown RBP11.14□□□□□ -0.63
DDX41-213ENST00000512027 TRBV20OR9-2A0A075B6H5 130 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 TRAV9-2A0A087WT02 112 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 RHODO00212 210 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 IFNA1P01562 189 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 IGHV3-30P01768 117 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 IGHV3-33P01772 117 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 IGHV3-30-3P0DP02 117 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 IGHV3-30-5P0DP03 117 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 BCL2P10415 239 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 LELP1Q5T871 98 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 PCLOQ9Y6V0 5065 aa11.13□□□□□ -0.63
DDX41-213ENST00000512027 HSPG2P98160 4391 aa11.12□□□□□ -0.63
DDX41-213ENST00000512027 TRAV8-6A0A0B4J262 113 aa11.12□□□□□ -0.63
DDX41-213ENST00000512027 GZMBP10144 247 aa11.12□□□□□ -0.63
DDX41-213ENST00000512027 MED9Q9NWA0 146 aa11.12□□□□□ -0.63
DDX41-213ENST00000512027 SNAI2O43623 268 aa11.11□□□□□ -0.63
DDX41-213ENST00000512027 CXCL1P09341 107 aa11.11□□□□□ -0.63
DDX41-213ENST00000512027 LINC01556Q5JQF7 62 aa11.11□□□□□ -0.63
DDX41-213ENST00000512027 BOLA1Q9Y3E2 137 aa11.11□□□□□ -0.63
DDX41-213ENST00000512027 PDE6DO43924 150 aa11.1□□□□□ -0.63
DDX41-213ENST00000512027 GNG4P50150 75 aa11.1□□□□□ -0.63
DDX41-213ENST00000512027 SSBP4Q9BWG4 385 aaPredicted RBP11.1□□□□□ -0.63
DDX41-213ENST00000512027 VAX2Q9UIW0 290 aa11.1□□□□□ -0.63
DDX41-213ENST00000512027 ABCA13Q86UQ4 5058 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 C19orf71A6NCJ1 209 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 RBFOX3A6NFN3 312 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 OR5AL1P0C617 328 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 ZNF56Q15929 161 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 SPANXN1Q5VSR9 72 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 NFE4Q86UQ8 179 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 C10orf126Q8N4M7 172 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 OR2D3Q8NGH3 330 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 TPPP3Q9BW30 176 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 Q9HAA7 133 aa11.09□□□□□ -0.63
DDX41-213ENST00000512027 K7EP13 123 aa11.08□□□□□ -0.64
DDX41-213ENST00000512027 ERVFC1-1P60608 527 aa11.08□□□□□ -0.64
DDX41-213ENST00000512027 A0A087WTM6 91 aa11.07□□□□□ -0.64
DDX41-213ENST00000512027 IBA57-AS1B1ANH7 110 aa11.07□□□□□ -0.64
DDX41-213ENST00000512027 DAZAP1Q96EP5 407 aaKnown RBP11.07□□□□□ -0.64
DDX41-213ENST00000512027 KRTAP17-1Q9BYP8 105 aa11.07□□□□□ -0.64
DDX41-213ENST00000512027 IGLC6P0CF74 106 aa11.06□□□□□ -0.64
DDX41-213ENST00000512027 DAZ4Q86SG3 579 aaKnown RBP11.05□□□□□ -0.64
DDX41-213ENST00000512027 FER1L6-AS1Q8NA97 138 aa11.05□□□□□ -0.64
DDX41-213ENST00000512027 NEXN-AS1Q8NBZ9 246 aa11.05□□□□□ -0.64
DDX41-213ENST00000512027 DAZ3Q9NR90 486 aaKnown RBP11.05□□□□□ -0.64
DDX41-213ENST00000512027 K7EN84 100 aa11.04□□□□□ -0.64
DDX41-213ENST00000512027 P01737 135 aa11.04□□□□□ -0.64
DDX41-213ENST00000512027 RAB4BP61018 213 aa11.04□□□□□ -0.64
DDX41-213ENST00000512027 UBE2D3P61077 147 aa11.04□□□□□ -0.64
DDX41-213ENST00000512027 UBE2D2P62837 147 aa11.04□□□□□ -0.64
DDX41-213ENST00000512027 BLOC1S1P78537 153 aa11.04□□□□□ -0.64
DDX41-213ENST00000512027 RPL36AP83881 106 aaKnown RBP11.04□□□□□ -0.64
DDX41-213ENST00000512027 RPL36ALQ969Q0 106 aaKnown RBP11.04□□□□□ -0.64
DDX41-213ENST00000512027 SMIM12Q96EX1 92 aa11.04□□□□□ -0.64
DDX41-213ENST00000512027 KIF25-AS1Q9Y6Z4 181 aa11.04□□□□□ -0.64
DDX41-213ENST00000512027 TRBV7-3A0A075B6L6 115 aa11.03□□□□□ -0.64
DDX41-213ENST00000512027 TRBV10-1A0A0K0K1A3 114 aa11.03□□□□□ -0.64
DDX41-213ENST00000512027 F5H697 171 aa11.03□□□□□ -0.64
DDX41-213ENST00000512027 EREGO14944 169 aa11.03□□□□□ -0.64
DDX41-213ENST00000512027 PSCAO43653 123 aa11.03□□□□□ -0.64
DDX41-213ENST00000512027 RPS20P60866 119 aaKnown RBP11.03□□□□□ -0.64
DDX41-213ENST00000512027 NUDT10Q8NFP7 164 aa11.03□□□□□ -0.64
DDX41-213ENST00000512027 NUDT11Q96G61 164 aa11.03□□□□□ -0.64
DDX41-213ENST00000512027 AP1S3Q96PC3 154 aa11.03□□□□□ -0.64
DDX41-213ENST00000512027 RNASE7Q9H1E1 156 aaKnown RBP11.03□□□□□ -0.64
DDX41-213ENST00000512027 A0A087WWC5 75 aa11.02□□□□□ -0.65
DDX41-213ENST00000512027 TAGLN2P37802 199 aaKnown RBP11.02□□□□□ -0.65
DDX41-213ENST00000512027 CEBPGP53567 150 aa11.02□□□□□ -0.65
DDX41-213ENST00000512027 TOR2AQ5JU69 321 aa11.02□□□□□ -0.65
DDX41-213ENST00000512027 OR10G8Q8NGN5 311 aa11.02□□□□□ -0.65
DDX41-213ENST00000512027 LYPD6BQ8NI32 183 aa11.02□□□□□ -0.65
DDX41-213ENST00000512027 OCC1Q8TAD7 63 aa11.02□□□□□ -0.65
DDX41-213ENST00000512027 DNAJC30Q96LL9 226 aa11.02□□□□□ -0.65
DDX41-213ENST00000512027 KRTAP4-5Q9BYR2 181 aa11.02□□□□□ -0.65
DDX41-213ENST00000512027 CDK2AP2O75956 126 aa11.01□□□□□ -0.65
DDX41-213ENST00000512027 MGPP08493 103 aa11.01□□□□□ -0.65
DDX41-213ENST00000512027 SMIM17P0DL12 118 aa11.01□□□□□ -0.65
DDX41-213ENST00000512027 LYZL1Q6UWQ5 148 aa11.01□□□□□ -0.65
DDX41-213ENST00000512027 NIT1Q86X76 327 aa11.01□□□□□ -0.65
DDX41-213ENST00000512027 LRCOL1A6NCL2 159 aa11□□□□□ -0.65
DDX41-213ENST00000512027 LAGE3Q14657 143 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms