RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 NDUFC1O43677 76 aa2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 ZNF791Q3KP31 576 aaPredicted RBP2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 C9orf116Q5BN46 136 aaPredicted RBP2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 Q8TAT8 98 aa2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 TRGV9Q99603 122 aa2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 NDUFB11Q9NX14 153 aa2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 LCTP09848 1927 aa2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 MYLKQ15746 1914 aa2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 LRP5O75197 1615 aa2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 CDK12Q9NYV4 1490 aaPredicted RBP2.12□□□□□ -2.07
CALCOCO2-220ENST00000511816 DOCK1Q14185 1865 aa2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 COL24A1Q17RW2 1714 aa2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 MYH8P13535 1937 aa2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 A0A1W2PPM0 123 aa2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 SYS1-DBNDD2H3BUS1 97 aa2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 CCL16O15467 120 aa2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 MPV17LQ2QL34 196 aa2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 LINC00474Q9P2X8 69 aa2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 SHANK2Q9UPX8 1470 aa2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 MAGI3Q5TCQ9 1506 aa2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 TNS1Q9HBL0 1735 aaKnown RBP2.11□□□□□ -2.07
CALCOCO2-220ENST00000511816 SHROOM3Q8TF72 1996 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 TRPM6Q9BX84 2022 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 MAP3K4Q9Y6R4 1608 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 ANKARQ7Z5J8 1434 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 PTPRMP28827 1452 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 IGKV2-24A0A0C4DH68 120 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 IGKV4-1P06312 121 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 IGLC2P0DOY2 106 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 IGLC3P0DOY3 106 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 KRTAP10-10P60014 251 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 KRTAP10-1P60331 282 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 IGFBP7Q16270 282 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 ETDBQ3ZM63 59 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 PYDC2Q56P42 97 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 ZNF833PQ6ZTB9 187 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 CYP4F30PQ9H0H9 118 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 NXT2Q9NPJ8 142 aaKnown RBP2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 LHFPL6Q9Y693 200 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 R4GN34 69 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 PEAK1Q9H792 1746 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 DISP1Q96F81 1524 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 UGGT2Q9NYU1 1516 aa2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 RGPD3A6NKT7 1758 aaPredicted RBP2.1□□□□□ -2.07
CALCOCO2-220ENST00000511816 SHROOM2Q13796 1616 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 ANK1P16157 1881 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 CPAMD8Q8IZJ3 1885 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 EDC4Q6P2E9 1401 aaKnown RBP2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 HEATR5AQ86XA9 2040 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 KANTRA0A1W2PQU2 76 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 C2orf70A6NJV1 201 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 HCG22E2RYF7 251 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 CFDP00746 253 aaPredicted RBP2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 HMGN3Q15651 99 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 BVES-AS1Q5T3Y7 98 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 CYP2G1PQ6ZSU1 146 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 AMELYQ99218 206 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 MANBALQ9NQG1 85 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 CDC42SE1Q9NRR8 79 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 PSORS1C2Q9UIG4 136 aa2.09□□□□□ -2.07
CALCOCO2-220ENST00000511816 HFM1A2PYH4 1435 aa2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 CHD3Q12873 2000 aaKnown RBP2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 ATP10BO94823 1461 aa2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 MLH3Q9UHC1 1453 aa2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 SEC16AO15027 2179 aa2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 INO80Q9ULG1 1556 aaPredicted RBP2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 TRBV7-1A0A0A6YYK4 115 aa2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 TMEM30CPA0ZSE6 113 aa2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 TFF1P04155 84 aa2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 P0C880 135 aa2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 Q9BRP9 147 aa2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 MROH1Q8NDA8 1641 aa2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 CLTCQ00610 1675 aaKnown RBP2.08□□□□□ -2.08
CALCOCO2-220ENST00000511816 KIAA1549LQ6ZVL6 1849 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 NCOA2Q15596 1464 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 UNC13BO14795 1591 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 TET3O43151 1660 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 MUC21A0A140T8X8 626 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 H3BUT2 72 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 WFDC2Q14508 124 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 ELOBQ15370 118 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 PMCHL1Q16048 86 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 SPATA45Q537H7 98 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 Q6ZTI0 123 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 NDUFA11Q86Y39 141 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 C22orf24Q9Y442 160 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 PRR14LQ5THK1 2151 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 MALRD1Q5VYJ5 2156 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 LTN1O94822 1766 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 CCDC88CQ9P219 2028 aa2.07□□□□□ -2.08
CALCOCO2-220ENST00000511816 CFAP74Q9C0B2 1584 aa2.06□□□□□ -2.08
CALCOCO2-220ENST00000511816 KDM6BO15054 1643 aa2.06□□□□□ -2.08
CALCOCO2-220ENST00000511816 MYO3AQ8NEV4 1616 aa2.06□□□□□ -2.08
CALCOCO2-220ENST00000511816 NWD2Q9ULI1 1742 aa2.06□□□□□ -2.08
CALCOCO2-220ENST00000511816 STRCQ7RTU9 1775 aa2.06□□□□□ -2.08
CALCOCO2-220ENST00000511816 TRAV23DV6A0A075B6W5 121 aa2.06□□□□□ -2.08
CALCOCO2-220ENST00000511816 TRAV12-3A0A0B4J271 114 aa2.06□□□□□ -2.08
CALCOCO2-220ENST00000511816 A0A0G2JND7 137 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms