RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 TMEM242Q9NWH2 141 aa7.14□□□□□ -1.27
POLR2J3-215ENST00000511313 JOSD1Q15040 202 aaPredicted RBP7.14□□□□□ -1.27
POLR2J3-215ENST00000511313 IGFL4Q6B9Z1 124 aa7.14□□□□□ -1.27
POLR2J3-215ENST00000511313 F6UB75 175 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 SPINK4O60575 86 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 CHCHD1Q96BP2 118 aaKnown RBP7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 USP24Q9UPU5 2620 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 IGHV3-38A0A0C4DH36 116 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 TYMSP04818 313 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 C18orf65Q6ZTR6 163 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 AMN1Q8IY45 258 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 Q8N1Y9 231 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 C19orf73Q9NVV2 129 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 DKK2Q9UBU2 259 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 CHD9Q3L8U1 2897 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 MTORP42345 2549 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 IGHV4-4A0A075B6R2 117 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 GNB1LQ9BYB4 327 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 TOMM7Q9P0U1 55 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 C5orf42Q9H799 3197 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 COX6CP09669 75 aa7.13□□□□□ -1.27
POLR2J3-215ENST00000511313 MSRB1Q9NZV6 116 aa7.12□□□□□ -1.27
POLR2J3-215ENST00000511313 IGKV1D-37A0A075B6S9 117 aa7.12□□□□□ -1.27
POLR2J3-215ENST00000511313 NTN5Q8WTR8 489 aaPredicted RBP7.12□□□□□ -1.27
POLR2J3-215ENST00000511313 HBDP02042 147 aa7.12□□□□□ -1.27
POLR2J3-215ENST00000511313 GAGE6Q13070 117 aa7.12□□□□□ -1.27
POLR2J3-215ENST00000511313 PATE2Q6UY27 113 aa7.12□□□□□ -1.27
POLR2J3-215ENST00000511313 IGHV3-73A0A0B4J1V6 119 aa7.12□□□□□ -1.27
POLR2J3-215ENST00000511313 SDHAF1A6NFY7 115 aa7.12□□□□□ -1.27
POLR2J3-215ENST00000511313 E7EUB6 86 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 NDUFA1O15239 70 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 LGALS9CQ6DKI2 356 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 AMTNQ6UX39 209 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 Q9HAA7 133 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 BPTFQ12830 3046 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 A0A087WWL8 130 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 LOC389332A0A1B0GUA5 103 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 COX7A2LO14548 114 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 NHP2Q9NX24 153 aaKnown RBP7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 CHTOPQ9Y3Y2 248 aaKnown RBP7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 IGHV1-58A0A0C4DH39 117 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 K7EIL1 84 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 PRB2P02812 416 aaPredicted RBP7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 NANOS2P60321 138 aaKnown RBP7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 OCC1Q8TAD7 63 aa7.11□□□□□ -1.27
POLR2J3-215ENST00000511313 JMJD1CQ15652 2540 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 LEPROTL1O95214 131 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 SLC25A34Q6PIV7 304 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 PMCHL2Q9BQD1 86 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 SELENOKQ9Y6D0 94 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 MYMXA0A1B0GTQ4 84 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 NPSP0C0P6 89 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 RPL23P62829 140 aaKnown RBP7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 ABCA12Q86UK0 2595 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 IGHV3-16A0A0C4DH30 117 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 KLLNB2CW77 178 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 BRWD1-AS2P59051 145 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 Q1RN00 199 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 TM2D3Q9BRN9 247 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 SCGB1D1O95968 90 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 TANC2Q9HCD6 1990 aa7.1□□□□□ -1.27
POLR2J3-215ENST00000511313 USP9YO00507 2555 aaPredicted RBP7.09□□□□□ -1.27
POLR2J3-215ENST00000511313 PMCHL1Q16048 86 aa7.09□□□□□ -1.27
POLR2J3-215ENST00000511313 WDFY3Q8IZQ1 3526 aa7.09□□□□□ -1.27
POLR2J3-215ENST00000511313 TMEM170BQ5T4T1 132 aa7.09□□□□□ -1.27
POLR2J3-215ENST00000511313 Q8N8P6 123 aa7.09□□□□□ -1.27
POLR2J3-215ENST00000511313 FAM167A-AS1Q96KT0 104 aa7.09□□□□□ -1.27
POLR2J3-215ENST00000511313 DNAH14Q0VDD8 3507 aa7.09□□□□□ -1.27
POLR2J3-215ENST00000511313 UBE2BP63146 152 aa7.09□□□□□ -1.27
POLR2J3-215ENST00000511313 H0Y8G0 127 aa7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 APOHP02749 345 aaPredicted RBP7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 KRTDAPP60985 99 aa7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 FAM104BQ5XKR9 115 aa7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 CYTL1Q9NRR1 136 aa7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 COL6A3P12111 3177 aa7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 F8WEM9 126 aa7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 CRYBA4P53673 196 aa7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 VSIG2Q96IQ7 327 aa7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 CAMK2N2Q96S95 79 aa7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 BAHCC1Q9P281 2608 aa7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 SRSF9Q13242 221 aaKnown RBP eCLIP7.08□□□□□ -1.28
POLR2J3-215ENST00000511313 IGHV3-30P01768 117 aa7.07□□□□□ -1.28
POLR2J3-215ENST00000511313 IGHV3-33P01772 117 aa7.07□□□□□ -1.28
POLR2J3-215ENST00000511313 IGHV3-30-3P0DP02 117 aa7.07□□□□□ -1.28
POLR2J3-215ENST00000511313 IGHV3-30-5P0DP03 117 aa7.07□□□□□ -1.28
POLR2J3-215ENST00000511313 TRANK1O15050 2925 aa7.07□□□□□ -1.28
POLR2J3-215ENST00000511313 RPL13AP40429 203 aaKnown RBP7.07□□□□□ -1.28
POLR2J3-215ENST00000511313 DNLZQ5SXM8 178 aa7.07□□□□□ -1.28
POLR2J3-215ENST00000511313 USP9XQ93008 2570 aaPredicted RBP7.07□□□□□ -1.28
POLR2J3-215ENST00000511313 DEFB4AO15263 64 aa7.07□□□□□ -1.28
POLR2J3-215ENST00000511313 C6orf223Q8N319 242 aa7.07□□□□□ -1.28
POLR2J3-215ENST00000511313 S100A7L2Q5SY68 101 aa7.06□□□□□ -1.28
POLR2J3-215ENST00000511313 ZNF705AQ6ZN79 300 aaPredicted RBP7.06□□□□□ -1.28
POLR2J3-215ENST00000511313 LINC01551Q86U37 167 aa7.06□□□□□ -1.28
POLR2J3-215ENST00000511313 SBSPONQ8IVN8 264 aa7.06□□□□□ -1.28
POLR2J3-215ENST00000511313 HERV-K104P63124 156 aa7.06□□□□□ -1.28
POLR2J3-215ENST00000511313 C4orf48Q5BLP8 95 aa7.06□□□□□ -1.28
POLR2J3-215ENST00000511313 PET117Q6UWS5 81 aa7.06□□□□□ -1.28
POLR2J3-215ENST00000511313 SMIM2Q9BVW6 85 aa7.06□□□□□ -1.28
POLR2J3-215ENST00000511313 ODF1Q14990 250 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms