RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 C6orf223Q8N319 242 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 OR2D3Q8NGH3 330 aa9.56□□□□□ -0.88
DDX41-212ENST00000511040 C19orf71A6NCJ1 209 aa9.55□□□□□ -0.88
DDX41-212ENST00000511040 CRYGDP07320 174 aa9.55□□□□□ -0.88
DDX41-212ENST00000511040 CXCL1P09341 107 aa9.55□□□□□ -0.88
DDX41-212ENST00000511040 SH2D6Q7Z4S9 175 aa9.55□□□□□ -0.88
DDX41-212ENST00000511040 WFDC10BQ8IUB3 73 aa9.55□□□□□ -0.88
DDX41-212ENST00000511040 TPPP3Q9BW30 176 aa9.55□□□□□ -0.88
DDX41-212ENST00000511040 RHODO00212 210 aa9.54□□□□□ -0.88
DDX41-212ENST00000511040 SNAI2O43623 268 aa9.54□□□□□ -0.88
DDX41-212ENST00000511040 P01737 135 aa9.54□□□□□ -0.88
DDX41-212ENST00000511040 SPANXN1Q5VSR9 72 aa9.54□□□□□ -0.88
DDX41-212ENST00000511040 OCC1Q8TAD7 63 aa9.54□□□□□ -0.88
DDX41-212ENST00000511040 SMIM12Q96EX1 92 aa9.54□□□□□ -0.88
DDX41-212ENST00000511040 SSBP4Q9BWG4 385 aaPredicted RBP9.54□□□□□ -0.88
DDX41-212ENST00000511040 EIF5A2Q9GZV4 153 aaKnown RBP9.54□□□□□ -0.88
DDX41-212ENST00000511040 FAT2Q9NYQ8 4349 aa9.54□□□□□ -0.88
DDX41-212ENST00000511040 A0A1B0GVY2 172 aa9.53□□□□□ -0.88
DDX41-212ENST00000511040 K7EN84 100 aa9.53□□□□□ -0.88
DDX41-212ENST00000511040 OR5AL1P0C617 328 aa9.53□□□□□ -0.88
DDX41-212ENST00000511040 RPS20P60866 119 aaKnown RBP9.53□□□□□ -0.88
DDX41-212ENST00000511040 ATP6V0E2Q8NHE4 81 aa9.53□□□□□ -0.88
DDX41-212ENST00000511040 A0A1W2PPQ1 181 aa9.52□□□□□ -0.89
DDX41-212ENST00000511040 TMEM250H0YL14 139 aa9.52□□□□□ -0.89
DDX41-212ENST00000511040 TNP2Q05952 138 aa9.52□□□□□ -0.89
DDX41-212ENST00000511040 FER1L6-AS1Q8NA97 138 aa9.52□□□□□ -0.89
DDX41-212ENST00000511040 NUDT10Q8NFP7 164 aa9.52□□□□□ -0.89
DDX41-212ENST00000511040 NUDT11Q96G61 164 aa9.52□□□□□ -0.89
DDX41-212ENST00000511040 RNASE7Q9H1E1 156 aaKnown RBP9.52□□□□□ -0.89
DDX41-212ENST00000511040 BIN3Q9NQY0 253 aa9.52□□□□□ -0.89
DDX41-212ENST00000511040 HECTD4Q9Y4D8 3996 aa9.52□□□□□ -0.89
DDX41-212ENST00000511040 IGLC6P0CF74 106 aa9.51□□□□□ -0.89
DDX41-212ENST00000511040 TIRAPP58753 221 aa9.51□□□□□ -0.89
DDX41-212ENST00000511040 LINC00315P59091 139 aa9.51□□□□□ -0.89
DDX41-212ENST00000511040 CLLU1Q5K131 121 aa9.51□□□□□ -0.89
DDX41-212ENST00000511040 FAM210AQ96ND0 272 aa9.51□□□□□ -0.89
DDX41-212ENST00000511040 TNFRSF18Q9Y5U5 241 aa9.51□□□□□ -0.89
DDX41-212ENST00000511040 LY96Q9Y6Y9 160 aa9.51□□□□□ -0.89
DDX41-212ENST00000511040 LINC00694P0DN24 101 aa9.5□□□□□ -0.89
DDX41-212ENST00000511040 ZNF56Q15929 161 aa9.5□□□□□ -0.89
DDX41-212ENST00000511040 OR10J3Q5JRS4 329 aa9.5□□□□□ -0.89
DDX41-212ENST00000511040 GTSF1LQ9H1H1 148 aa9.5□□□□□ -0.89
DDX41-212ENST00000511040 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
DDX41-212ENST00000511040 RYR1P21817 5038 aa9.5□□□□□ -0.89
DDX41-212ENST00000511040 PCLOQ9Y6V0 5065 aa9.49□□□□□ -0.89
DDX41-212ENST00000511040 TRAV8-6A0A0B4J262 113 aa9.49□□□□□ -0.89
DDX41-212ENST00000511040 XKRY2A2RUG3 117 aa9.49□□□□□ -0.89
DDX41-212ENST00000511040 F5H697 171 aa9.49□□□□□ -0.89
DDX41-212ENST00000511040 SRP19P09132 144 aaKnown RBP9.49□□□□□ -0.89
DDX41-212ENST00000511040 DNAH10OSP0CZ25 163 aa9.49□□□□□ -0.89
DDX41-212ENST00000511040 LYZL1Q6UWQ5 148 aa9.49□□□□□ -0.89
DDX41-212ENST00000511040 SMIM7Q9BQ49 75 aa9.49□□□□□ -0.89
DDX41-212ENST00000511040 RPP21Q9H633 154 aaKnown RBP9.49□□□□□ -0.89
DDX41-212ENST00000511040 EVI2AP22794 236 aa9.48□□□□□ -0.89
DDX41-212ENST00000511040 RAB4BP61018 213 aa9.48□□□□□ -0.89
DDX41-212ENST00000511040 LELP1Q5T871 98 aa9.48□□□□□ -0.89
DDX41-212ENST00000511040 AP1S3Q96PC3 154 aa9.48□□□□□ -0.89
DDX41-212ENST00000511040 TRAV9-2A0A087WT02 112 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 IGHV3-38A0A0C4DH36 116 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 ZNF727A8MUV8 499 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 IGHV3-30P01768 117 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 IGHV3-33P01772 117 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 MGPP08493 103 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 SMIM17P0DL12 118 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 IGHV3-30-3P0DP02 117 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 IGHV3-30-5P0DP03 117 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 CACNG7P62955 275 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 SRSF3P84103 164 aaKnown RBP9.47□□□□□ -0.89
DDX41-212ENST00000511040 KIF25-AS1Q9Y6Z4 181 aa9.47□□□□□ -0.89
DDX41-212ENST00000511040 TRBV10-1A0A0K0K1A3 114 aa9.46□□□□□ -0.9
DDX41-212ENST00000511040 C9JQL5 133 aa9.46□□□□□ -0.9
DDX41-212ENST00000511040 F2Z2F3 143 aa9.46□□□□□ -0.9
DDX41-212ENST00000511040 GATCO43716 136 aaKnown RBP9.46□□□□□ -0.9
DDX41-212ENST00000511040 RPL36AP83881 106 aaKnown RBP9.46□□□□□ -0.9
DDX41-212ENST00000511040 Q6ZRN7 208 aaPredicted RBP9.46□□□□□ -0.9
DDX41-212ENST00000511040 Q8N3U1 123 aa9.46□□□□□ -0.9
DDX41-212ENST00000511040 RPL36ALQ969Q0 106 aaKnown RBP9.46□□□□□ -0.9
DDX41-212ENST00000511040 CTRLP40313 264 aa9.45□□□□□ -0.9
DDX41-212ENST00000511040 ERVFC1-1P60608 527 aa9.45□□□□□ -0.9
DDX41-212ENST00000511040 LINC01556Q5JQF7 62 aa9.45□□□□□ -0.9
DDX41-212ENST00000511040 NEXN-AS1Q8NBZ9 246 aa9.45□□□□□ -0.9
DDX41-212ENST00000511040 GTSF1Q8WW33 167 aa9.45□□□□□ -0.9
DDX41-212ENST00000511040 TRBV7-3A0A075B6L6 115 aa9.44□□□□□ -0.9
DDX41-212ENST00000511040 LINC00862A6NCI5 91 aa9.44□□□□□ -0.9
DDX41-212ENST00000511040 NDUFS6O75380 124 aaKnown RBP9.44□□□□□ -0.9
DDX41-212ENST00000511040 BTF3P20290 206 aaKnown RBP9.44□□□□□ -0.9
DDX41-212ENST00000511040 NTF3P20783 257 aa9.44□□□□□ -0.9
DDX41-212ENST00000511040 UBE2D3P61077 147 aa9.44□□□□□ -0.9
DDX41-212ENST00000511040 RAB14P61106 215 aa9.44□□□□□ -0.9
DDX41-212ENST00000511040 UBE2D2P62837 147 aa9.44□□□□□ -0.9
DDX41-212ENST00000511040 TWIST1Q15672 202 aa9.44□□□□□ -0.9
DDX41-212ENST00000511040 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
DDX41-212ENST00000511040 PKD1P98161 4303 aa9.44□□□□□ -0.9
DDX41-212ENST00000511040 PKHD1P08F94 4074 aa9.43□□□□□ -0.9
DDX41-212ENST00000511040 PEA15Q15121 130 aa9.43□□□□□ -0.9
DDX41-212ENST00000511040 SUMO4Q6EEV6 95 aa9.43□□□□□ -0.9
DDX41-212ENST00000511040 FAM231DQ6ZW35 169 aa9.43□□□□□ -0.9
DDX41-212ENST00000511040 OR10G8Q8NGN5 311 aa9.43□□□□□ -0.9
DDX41-212ENST00000511040 PGLYRP4Q96LB8 373 aa9.43□□□□□ -0.9
DDX41-212ENST00000511040 A0A087WWC5 75 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms