RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 DNAH14Q0VDD8 3507 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 ATG2BQ96BY7 2078 aa2.27□□□□□ -2.05
NUP54-209ENST00000510569 SEC16AO15027 2179 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 RP1P56715 2156 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 WDFY4Q6ZS81 3184 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 TRAV1-2A0A0B4J238 106 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 LOC107986453A0A1B0GWG9 222 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 FAM24AA6NFZ4 105 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 H3BQ15 152 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 K7EP34 96 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 LYRM1O43325 122 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 SSSCA1O60232 199 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 PITX3O75364 302 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 HYPMO75409 117 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 CPSF4O95639 269 aaKnown RBP2.26□□□□□ -2.05
NUP54-209ENST00000510569 NPYP01303 97 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 APOC3P02656 99 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 MT-ATP8P03928 68 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 CD3DP04234 171 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 RNASE2P10153 161 aaKnown RBP2.26□□□□□ -2.05
NUP54-209ENST00000510569 SLC25A4P12235 298 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 CCL4P13236 92 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 TPT1P13693 172 aaKnown RBP2.26□□□□□ -2.05
NUP54-209ENST00000510569 IL9P15248 144 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 SNCAP37840 140 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 FXYD7P58549 80 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 FOXF1Q12946 379 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 KHDC3LQ587J8 217 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 SPRNQ5BIV9 151 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 ZNF322Q6U7Q0 402 aaPredicted RBP2.26□□□□□ -2.05
NUP54-209ENST00000510569 PATE2Q6UY27 113 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 C16orf47Q6ZP98 133 aaPredicted RBP2.26□□□□□ -2.05
NUP54-209ENST00000510569 OR5AS1Q8N127 324 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 Q8N976 141 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 CLDND2Q8NHS1 167 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 LSM10Q969L4 123 aaKnown RBP2.26□□□□□ -2.05
NUP54-209ENST00000510569 HYLS1Q96M11 299 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 NPVFQ9HCQ7 196 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 SMCO4Q9NRQ5 59 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 EML6Q6ZMW3 1958 aa2.26□□□□□ -2.05
NUP54-209ENST00000510569 EXPH5Q8NEV8 1989 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 LAMA1P25391 3075 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 GRIFINA4D1Z8 144 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 PDCD5O14737 125 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 NDUFB6O95139 128 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 TCL1BO95988 128 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 IGKV4-1P06312 121 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 TLX1NBP0CAT3 122 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 SAA1P0DJI8 122 aaPredicted RBP2.25□□□□□ -2.05
NUP54-209ENST00000510569 FABP4P15090 132 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 SLC25A16P16260 332 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 PEBP1P30086 187 aaKnown RBP2.25□□□□□ -2.05
NUP54-209ENST00000510569 ASIPP42127 132 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 DEFB103AP81534 67 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 ASB16-AS1Q495Z4 193 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 C10orf91Q5T1B1 145 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 UNQ5815/PRO19632Q6UWF5 114 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 SOSTDC1Q6X4U4 206 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 NTM-AS1Q6ZSK4 140 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 FAM216BQ8N7L0 139 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 CNEP1R1Q8N9A8 125 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 PFN4Q8NHR9 129 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 SMIM4Q8WVI0 70 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 FGF13Q92913 245 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 TTTY13Q9BZ97 58 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 CMC2Q9NRP2 79 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 TAS2R4Q9NYW5 299 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 UQCR10Q9UDW1 63 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 CCL26Q9Y258 94 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 USP34Q70CQ2 3546 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 SCN3AQ9NY46 2000 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 CACNA1CQ13936 2221 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 NCOR1O75376 2440 aa2.25□□□□□ -2.05
NUP54-209ENST00000510569 SPTBP11277 2137 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 BRWD1Q9NSI6 2320 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 ZNF292O60281 2723 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 TRBV24-1A0A075B6N3 115 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 IGHV1-3A0A0C4DH29 117 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 C17orf51A8MQB3 221 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 A8MWP4 228 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 F8W1H4 67 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 SDCBPO00560 298 aaPredicted RBP2.24□□□□□ -2.05
NUP54-209ENST00000510569 PIN1P1O15428 100 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 SLC25A20O43772 301 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 SNCGO76070 127 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 UBL3O95164 117 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 IGKV1D-33P01593 117 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 IGKV1-33P01594 117 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 IGHV1-69P01742 117 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 IGHV1-46P01743 117 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 GYPAP02724 150 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 IL5P05113 134 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 FUSP35637 526 aaKnown RBP eCLIP2.24□□□□□ -2.05
NUP54-209ENST00000510569 ATP5EP56381 51 aaPredicted RBP2.24□□□□□ -2.05
NUP54-209ENST00000510569 PCBD1P61457 104 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 INSL4Q14641 139 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 CDK5R1Q15078 307 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 MIAQ16674 131 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 LGALSLQ3ZCW2 172 aaPredicted RBP2.24□□□□□ -2.05
NUP54-209ENST00000510569 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms