RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 SULT1A2P50226 295 aa12.54□□□□□ -0.4
LSM6-206ENST00000510331 OR10J3Q5JRS4 329 aa12.54□□□□□ -0.4
LSM6-206ENST00000510331 EIF5AL1Q6IS14 154 aaKnown RBP12.54□□□□□ -0.4
LSM6-206ENST00000510331 ATP6V0E2Q8NHE4 81 aa12.54□□□□□ -0.4
LSM6-206ENST00000510331 LINC01556Q5JQF7 62 aa12.53□□□□□ -0.4
LSM6-206ENST00000510331 LELP1Q5T871 98 aa12.53□□□□□ -0.4
LSM6-206ENST00000510331 AKAP14Q86UN6 197 aa12.53□□□□□ -0.4
LSM6-206ENST00000510331 NFE4Q86UQ8 179 aa12.53□□□□□ -0.4
LSM6-206ENST00000510331 ZFP82Q8N141 532 aa12.53□□□□□ -0.4
LSM6-206ENST00000510331 SFRP2Q96HF1 295 aa12.53□□□□□ -0.4
LSM6-206ENST00000510331 GTSF1LQ9H1H1 148 aa12.53□□□□□ -0.4
LSM6-206ENST00000510331 TRAV8-6A0A0B4J262 113 aa12.52□□□□□ -0.41
LSM6-206ENST00000510331 K7EP13 123 aa12.52□□□□□ -0.41
LSM6-206ENST00000510331 FUSP35637 526 aaKnown RBP eCLIP12.52□□□□□ -0.41
LSM6-206ENST00000510331 ERVFC1-1P60608 527 aa12.52□□□□□ -0.41
LSM6-206ENST00000510331 SLC51BQ86UW2 128 aa12.52□□□□□ -0.41
LSM6-206ENST00000510331 C10orf126Q8N4M7 172 aa12.52□□□□□ -0.41
LSM6-206ENST00000510331 OR10AG1Q8NH19 301 aa12.52□□□□□ -0.41
LSM6-206ENST00000510331 CENPWQ5EE01 88 aa12.51□□□□□ -0.41
LSM6-206ENST00000510331 Q8N3U1 123 aa12.51□□□□□ -0.41
LSM6-206ENST00000510331 C9orf62Q8N4C0 152 aa12.51□□□□□ -0.41
LSM6-206ENST00000510331 KRTAP17-1Q9BYP8 105 aa12.51□□□□□ -0.41
LSM6-206ENST00000510331 IGHV3-30P01768 117 aa12.5□□□□□ -0.41
LSM6-206ENST00000510331 IGHV3-33P01772 117 aa12.5□□□□□ -0.41
LSM6-206ENST00000510331 CXCL1P09341 107 aa12.5□□□□□ -0.41
LSM6-206ENST00000510331 IGHV3-30-3P0DP02 117 aa12.5□□□□□ -0.41
LSM6-206ENST00000510331 IGHV3-30-5P0DP03 117 aa12.5□□□□□ -0.41
LSM6-206ENST00000510331 MUC21A0A0G2JKD1 596 aa12.49□□□□□ -0.41
LSM6-206ENST00000510331 MUC21A0A140T8X8 626 aa12.49□□□□□ -0.41
LSM6-206ENST00000510331 TEX46H3BTG2 121 aa12.49□□□□□ -0.41
LSM6-206ENST00000510331 BCL2P10415 239 aa12.49□□□□□ -0.41
LSM6-206ENST00000510331 MEF2BQ02080 365 aaPredicted RBP12.49□□□□□ -0.41
LSM6-206ENST00000510331 A0A087WTM6 91 aa12.48□□□□□ -0.41
LSM6-206ENST00000510331 CDK2AP2O75956 126 aa12.48□□□□□ -0.41
LSM6-206ENST00000510331 SNAI2O43623 268 aa12.47□□□□□ -0.41
LSM6-206ENST00000510331 IFNA1P01562 189 aa12.47□□□□□ -0.41
LSM6-206ENST00000510331 IGLV2-8P01709 118 aa12.47□□□□□ -0.41
LSM6-206ENST00000510331 Q9HAA7 133 aa12.47□□□□□ -0.41
LSM6-206ENST00000510331 TRBV20OR9-2A0A075B6H5 130 aa12.46□□□□□ -0.41
LSM6-206ENST00000510331 RAB19A4D1S5 217 aa12.46□□□□□ -0.41
LSM6-206ENST00000510331 IBA57-AS1B1ANH7 110 aa12.45□□□□□ -0.42
LSM6-206ENST00000510331 EREGO14944 169 aa12.45□□□□□ -0.42
LSM6-206ENST00000510331 PDE6DO43924 150 aa12.45□□□□□ -0.42
LSM6-206ENST00000510331 OR5AL1P0C617 328 aa12.45□□□□□ -0.42
LSM6-206ENST00000510331 GNG4P50150 75 aa12.45□□□□□ -0.42
LSM6-206ENST00000510331 ZNF56Q15929 161 aa12.45□□□□□ -0.42
LSM6-206ENST00000510331 SSBP4Q9BWG4 385 aaPredicted RBP12.45□□□□□ -0.42
LSM6-206ENST00000510331 GZMBP10144 247 aa12.44□□□□□ -0.42
LSM6-206ENST00000510331 SPANXN1Q5VSR9 72 aa12.44□□□□□ -0.42
LSM6-206ENST00000510331 SSTP61278 116 aa12.43□□□□□ -0.42
LSM6-206ENST00000510331 ALKAL2Q6UX46 152 aa12.43□□□□□ -0.42
LSM6-206ENST00000510331 KRTAP4-5Q9BYR2 181 aa12.43□□□□□ -0.42
LSM6-206ENST00000510331 MED9Q9NWA0 146 aa12.43□□□□□ -0.42
LSM6-206ENST00000510331 VAX2Q9UIW0 290 aa12.43□□□□□ -0.42
LSM6-206ENST00000510331 TRBV10-1A0A0K0K1A3 114 aa12.42□□□□□ -0.42
LSM6-206ENST00000510331 C19orf71A6NCJ1 209 aa12.42□□□□□ -0.42
LSM6-206ENST00000510331 PSCAO43653 123 aa12.42□□□□□ -0.42
LSM6-206ENST00000510331 LAGE3Q14657 143 aa12.42□□□□□ -0.42
LSM6-206ENST00000510331 CDPF1Q6NVV7 123 aa12.42□□□□□ -0.42
LSM6-206ENST00000510331 OR2D3Q8NGH3 330 aa12.42□□□□□ -0.42
LSM6-206ENST00000510331 TPPP3Q9BW30 176 aa12.42□□□□□ -0.42
LSM6-206ENST00000510331 BOLA1Q9Y3E2 137 aa12.42□□□□□ -0.42
LSM6-206ENST00000510331 A0A087WWC5 75 aa12.41□□□□□ -0.42
LSM6-206ENST00000510331 RBFOX3A6NFN3 312 aa12.41□□□□□ -0.42
LSM6-206ENST00000510331 UBE2D3P61077 147 aa12.41□□□□□ -0.42
LSM6-206ENST00000510331 UBE2D2P62837 147 aa12.41□□□□□ -0.42
LSM6-206ENST00000510331 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
LSM6-206ENST00000510331 DAZ4Q86SG3 579 aaKnown RBP12.41□□□□□ -0.42
LSM6-206ENST00000510331 MAPKAPK5-AS1Q8N8E1 139 aa12.41□□□□□ -0.42
LSM6-206ENST00000510331 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
LSM6-206ENST00000510331 SMIM12Q96EX1 92 aa12.41□□□□□ -0.42
LSM6-206ENST00000510331 AP1S3Q96PC3 154 aa12.41□□□□□ -0.42
LSM6-206ENST00000510331 DAZ3Q9NR90 486 aaKnown RBP12.41□□□□□ -0.42
LSM6-206ENST00000510331 A0A1B0GVG6 124 aa12.4□□□□□ -0.42
LSM6-206ENST00000510331 LRCOL1A6NCL2 159 aa12.4□□□□□ -0.42
LSM6-206ENST00000510331 IGLC6P0CF74 106 aa12.4□□□□□ -0.42
LSM6-206ENST00000510331 NKX2-5P52952 324 aaPredicted RBP12.4□□□□□ -0.42
LSM6-206ENST00000510331 RAB4BP61018 213 aa12.4□□□□□ -0.42
LSM6-206ENST00000510331 FER1L6-AS1Q8NA97 138 aa12.4□□□□□ -0.42
LSM6-206ENST00000510331 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.42
LSM6-206ENST00000510331 DAZAP1Q96EP5 407 aaKnown RBP12.4□□□□□ -0.42
LSM6-206ENST00000510331 PGPEP1Q9NXJ5 209 aa12.4□□□□□ -0.42
LSM6-206ENST00000510331 TRBV7-3A0A075B6L6 115 aa12.39□□□□□ -0.43
LSM6-206ENST00000510331 OR10G8Q8NGN5 311 aa12.39□□□□□ -0.43
LSM6-206ENST00000510331 P01737 135 aa12.38□□□□□ -0.43
LSM6-206ENST00000510331 RPS20P60866 119 aaKnown RBP12.38□□□□□ -0.43
LSM6-206ENST00000510331 NIT1Q86X76 327 aa12.38□□□□□ -0.43
LSM6-206ENST00000510331 KIF25-AS1Q9Y6Z4 181 aa12.38□□□□□ -0.43
LSM6-206ENST00000510331 F5H697 171 aa12.37□□□□□ -0.43
LSM6-206ENST00000510331 TAGLN2P37802 199 aaKnown RBP12.37□□□□□ -0.43
LSM6-206ENST00000510331 K7EN84 100 aa12.36□□□□□ -0.43
LSM6-206ENST00000510331 MGPP08493 103 aa12.36□□□□□ -0.43
LSM6-206ENST00000510331 KRTAP10-1P60331 282 aa12.36□□□□□ -0.43
LSM6-206ENST00000510331 WFDC2Q14508 124 aa12.36□□□□□ -0.43
LSM6-206ENST00000510331 DNAJC30Q96LL9 226 aa12.36□□□□□ -0.43
LSM6-206ENST00000510331 URGCP-MRPS24S4R325 110 aa12.36□□□□□ -0.43
LSM6-206ENST00000510331 SMIM17P0DL12 118 aa12.35□□□□□ -0.43
LSM6-206ENST00000510331 BLOC1S1P78537 153 aa12.34□□□□□ -0.43
LSM6-206ENST00000510331 Q8N814 137 aa12.34□□□□□ -0.43
LSM6-206ENST00000510331 RNASE7Q9H1E1 156 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms