RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 GNG4P50150 75 aa9.22□□□□□ -0.93
SNF8-206ENST00000509989 TOR2AQ5JU69 321 aa9.22□□□□□ -0.93
SNF8-206ENST00000509989 LINC00336Q6ZUF6 198 aa9.22□□□□□ -0.93
SNF8-206ENST00000509989 OCC1Q8TAD7 63 aa9.22□□□□□ -0.93
SNF8-206ENST00000509989 MSRB1Q9NZV6 116 aa9.22□□□□□ -0.93
SNF8-206ENST00000509989 DNAH5Q8TE73 4624 aa9.21□□□□□ -0.94
SNF8-206ENST00000509989 IGLC6P0CF74 106 aa9.21□□□□□ -0.94
SNF8-206ENST00000509989 RHOHQ15669 191 aa9.21□□□□□ -0.94
SNF8-206ENST00000509989 PIK3CD-AS1Q5SR53 167 aa9.21□□□□□ -0.94
SNF8-206ENST00000509989 ZFP2Q6ZN57 461 aa9.21□□□□□ -0.94
SNF8-206ENST00000509989 OR2D3Q8NGH3 330 aa9.21□□□□□ -0.94
SNF8-206ENST00000509989 HERC2O95714 4834 aa9.2□□□□□ -0.94
SNF8-206ENST00000509989 C9JQL5 133 aa9.2□□□□□ -0.94
SNF8-206ENST00000509989 CXCL1P09341 107 aa9.2□□□□□ -0.94
SNF8-206ENST00000509989 MED14OSP0DP75 135 aa9.2□□□□□ -0.94
SNF8-206ENST00000509989 LINC00315P59091 139 aa9.2□□□□□ -0.94
SNF8-206ENST00000509989 Q6ZRN7 208 aaPredicted RBP9.2□□□□□ -0.94
SNF8-206ENST00000509989 ZFP82Q8N141 532 aa9.2□□□□□ -0.94
SNF8-206ENST00000509989 SYT8Q8NBV8 401 aa9.2□□□□□ -0.94
SNF8-206ENST00000509989 NUDT10Q8NFP7 164 aa9.2□□□□□ -0.94
SNF8-206ENST00000509989 NUDT11Q96G61 164 aa9.2□□□□□ -0.94
SNF8-206ENST00000509989 PRADC1Q9BSG0 188 aa9.2□□□□□ -0.94
SNF8-206ENST00000509989 RNASE7Q9H1E1 156 aaKnown RBP9.2□□□□□ -0.94
SNF8-206ENST00000509989 CEBPGP53567 150 aa9.19□□□□□ -0.94
SNF8-206ENST00000509989 SRSF3P84103 164 aaKnown RBP9.19□□□□□ -0.94
SNF8-206ENST00000509989 KIF25-AS1Q9Y6Z4 181 aa9.19□□□□□ -0.94
SNF8-206ENST00000509989 CIDEAO60543 219 aa9.18□□□□□ -0.94
SNF8-206ENST00000509989 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
SNF8-206ENST00000509989 OR5AL1P0C617 328 aa9.18□□□□□ -0.94
SNF8-206ENST00000509989 FUSP35637 526 aaKnown RBP eCLIP9.18□□□□□ -0.94
SNF8-206ENST00000509989 ATP6V0E2Q8NHE4 81 aa9.18□□□□□ -0.94
SNF8-206ENST00000509989 FAM210AQ96ND0 272 aa9.18□□□□□ -0.94
SNF8-206ENST00000509989 TPPP3Q9BW30 176 aa9.18□□□□□ -0.94
SNF8-206ENST00000509989 LRP1BQ9NZR2 4599 aa9.17□□□□□ -0.94
SNF8-206ENST00000509989 TEX261Q6UWH6 196 aa9.17□□□□□ -0.94
SNF8-206ENST00000509989 LYZL1Q6UWQ5 148 aa9.17□□□□□ -0.94
SNF8-206ENST00000509989 FER1L6-AS1Q8NA97 138 aa9.17□□□□□ -0.94
SNF8-206ENST00000509989 A0A1W2PPQ1 181 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 TMEM250H0YL14 139 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 P01737 135 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 IGHV3-30P01768 117 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 IGHV3-33P01772 117 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 DNAH10OSP0CZ25 163 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 IGHV3-30-3P0DP02 117 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 IGHV3-30-5P0DP03 117 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 TAGLN2P37802 199 aaKnown RBP9.16□□□□□ -0.94
SNF8-206ENST00000509989 TTC32Q5I0X7 151 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 SPANXN1Q5VSR9 72 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 DAZAP1Q96EP5 407 aaKnown RBP9.16□□□□□ -0.94
SNF8-206ENST00000509989 SMIM12Q96EX1 92 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 EIF5A2Q9GZV4 153 aaKnown RBP9.16□□□□□ -0.94
SNF8-206ENST00000509989 GTSF1LQ9H1H1 148 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 LY96Q9Y6Y9 160 aa9.16□□□□□ -0.94
SNF8-206ENST00000509989 RHODO00212 210 aa9.15□□□□□ -0.94
SNF8-206ENST00000509989 TIRAPP58753 221 aa9.15□□□□□ -0.94
SNF8-206ENST00000509989 ZNF56Q15929 161 aa9.15□□□□□ -0.94
SNF8-206ENST00000509989 OR10J3Q5JRS4 329 aa9.15□□□□□ -0.94
SNF8-206ENST00000509989 SOHLH1Q5JUK2 328 aa9.15□□□□□ -0.94
SNF8-206ENST00000509989 GTSF1Q8WW33 167 aa9.15□□□□□ -0.94
SNF8-206ENST00000509989 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
SNF8-206ENST00000509989 KRTAP10-2P60368 255 aa9.14□□□□□ -0.95
SNF8-206ENST00000509989 LELP1Q5T871 98 aa9.14□□□□□ -0.95
SNF8-206ENST00000509989 NEXN-AS1Q8NBZ9 246 aa9.14□□□□□ -0.95
SNF8-206ENST00000509989 DNAJC30Q96LL9 226 aa9.14□□□□□ -0.95
SNF8-206ENST00000509989 RYR1P21817 5038 aa9.13□□□□□ -0.95
SNF8-206ENST00000509989 EVI2AP22794 236 aa9.13□□□□□ -0.95
SNF8-206ENST00000509989 FOXA3P55318 350 aaPredicted RBP9.13□□□□□ -0.95
SNF8-206ENST00000509989 RPS20P60866 119 aaKnown RBP9.13□□□□□ -0.95
SNF8-206ENST00000509989 UBE2D3P61077 147 aa9.13□□□□□ -0.95
SNF8-206ENST00000509989 UBE2D2P62837 147 aa9.13□□□□□ -0.95
SNF8-206ENST00000509989 SH2D6Q7Z4S9 175 aa9.13□□□□□ -0.95
SNF8-206ENST00000509989 RPP21Q9H633 154 aaKnown RBP9.13□□□□□ -0.95
SNF8-206ENST00000509989 APOBP04114 4563 aaKnown RBP9.12□□□□□ -0.95
SNF8-206ENST00000509989 NTF3P20783 257 aa9.12□□□□□ -0.95
SNF8-206ENST00000509989 RAB4BP61018 213 aa9.12□□□□□ -0.95
SNF8-206ENST00000509989 DEFB104AQ8WTQ1 72 aa9.12□□□□□ -0.95
SNF8-206ENST00000509989 SMIM7Q9BQ49 75 aa9.12□□□□□ -0.95
SNF8-206ENST00000509989 KRTAP17-1Q9BYP8 105 aa9.12□□□□□ -0.95
SNF8-206ENST00000509989 F5H697 171 aa9.11□□□□□ -0.95
SNF8-206ENST00000509989 MGPP08493 103 aa9.11□□□□□ -0.95
SNF8-206ENST00000509989 CTRLP40313 264 aa9.11□□□□□ -0.95
SNF8-206ENST00000509989 LINC01556Q5JQF7 62 aa9.11□□□□□ -0.95
SNF8-206ENST00000509989 SUMO4Q6EEV6 95 aa9.11□□□□□ -0.95
SNF8-206ENST00000509989 DAZ4Q86SG3 579 aaKnown RBP9.11□□□□□ -0.95
SNF8-206ENST00000509989 LINC01551Q86U37 167 aa9.11□□□□□ -0.95
SNF8-206ENST00000509989 DAZ3Q9NR90 486 aaKnown RBP9.11□□□□□ -0.95
SNF8-206ENST00000509989 TRAV8-6A0A0B4J262 113 aa9.1□□□□□ -0.95
SNF8-206ENST00000509989 ZNF727A8MUV8 499 aa9.1□□□□□ -0.95
SNF8-206ENST00000509989 GATCO43716 136 aaKnown RBP9.1□□□□□ -0.95
SNF8-206ENST00000509989 NTM-AS1Q6ZSK4 140 aa9.1□□□□□ -0.95
SNF8-206ENST00000509989 SPATA12Q7Z6I5 190 aa9.1□□□□□ -0.95
SNF8-206ENST00000509989 OR10G8Q8NGN5 311 aa9.1□□□□□ -0.95
SNF8-206ENST00000509989 AP1S3Q96PC3 154 aa9.1□□□□□ -0.95
SNF8-206ENST00000509989 HSPG2P98160 4391 aa9.1□□□□□ -0.95
SNF8-206ENST00000509989 TRBV7-3A0A075B6L6 115 aa9.09□□□□□ -0.95
SNF8-206ENST00000509989 IBA57-AS1B1ANH7 110 aa9.09□□□□□ -0.95
SNF8-206ENST00000509989 M0QY20 66 aa9.09□□□□□ -0.95
SNF8-206ENST00000509989 CACNG7P62955 275 aa9.09□□□□□ -0.95
SNF8-206ENST00000509989 RPL36AP83881 106 aaKnown RBP9.09□□□□□ -0.95
SNF8-206ENST00000509989 FAM231DQ6ZW35 169 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms