RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 S100A4P26447 101 aaKnown RBP10.29□□□□□ -0.76
RAB40C-202ENST00000509637 UBE2G2P60604 165 aa10.29□□□□□ -0.76
RAB40C-202ENST00000509637 Q86TA4 180 aa10.29□□□□□ -0.76
RAB40C-202ENST00000509637 SFRP2Q96HF1 295 aa10.29□□□□□ -0.76
RAB40C-202ENST00000509637 AQP10Q96PS8 301 aa10.29□□□□□ -0.76
RAB40C-202ENST00000509637 ALG5Q9Y673 324 aa10.29□□□□□ -0.76
RAB40C-202ENST00000509637 B4DEV8 164 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 K7EQM0 130 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 SH2D1AO60880 128 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 OXTP01178 125 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 IGLV2-8P01709 118 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 FGF8P55075 233 aaPredicted RBP10.28□□□□□ -0.76
RAB40C-202ENST00000509637 UBE2D3P61077 147 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 UBE2D2P62837 147 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 TOR2AQ5JU69 321 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 SERTAD4-AS1Q5TG53 156 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 FAM74A4Q5TZK3 123 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 COX8CQ7Z4L0 72 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 TMEM167BQ9NRX6 74 aa10.28□□□□□ -0.76
RAB40C-202ENST00000509637 MT1HL1P0DM35 61 aa10.27□□□□□ -0.77
RAB40C-202ENST00000509637 SERF2P84101 59 aa10.27□□□□□ -0.77
RAB40C-202ENST00000509637 ZFP69Q49AA0 526 aa10.27□□□□□ -0.77
RAB40C-202ENST00000509637 RPL7L1Q6DKI1 246 aaKnown RBP10.27□□□□□ -0.77
RAB40C-202ENST00000509637 KRTAP26-1Q6PEX3 210 aa10.27□□□□□ -0.77
RAB40C-202ENST00000509637 ACTR3CQ9C0K3 210 aaPredicted RBP10.27□□□□□ -0.77
RAB40C-202ENST00000509637 TNFSF18Q9UNG2 199 aa10.27□□□□□ -0.77
RAB40C-202ENST00000509637 COX11Q9Y6N1 276 aa10.27□□□□□ -0.77
RAB40C-202ENST00000509637 TMSB15BA0A087X1C1 80 aa10.26□□□□□ -0.77
RAB40C-202ENST00000509637 FAM74A7A6NL05 159 aa10.26□□□□□ -0.77
RAB40C-202ENST00000509637 PEX7O00628 323 aa10.26□□□□□ -0.77
RAB40C-202ENST00000509637 PRSS1P07477 247 aa10.25□□□□□ -0.77
RAB40C-202ENST00000509637 MED28Q9H204 178 aa10.25□□□□□ -0.77
RAB40C-202ENST00000509637 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.25□□□□□ -0.77
RAB40C-202ENST00000509637 M0R381 172 aa10.24□□□□□ -0.77
RAB40C-202ENST00000509637 RHODO00212 210 aa10.24□□□□□ -0.77
RAB40C-202ENST00000509637 IFNA7P01567 189 aa10.24□□□□□ -0.77
RAB40C-202ENST00000509637 ZNF674Q2M3X9 581 aa10.24□□□□□ -0.77
RAB40C-202ENST00000509637 MPV17L2Q567V2 206 aa10.24□□□□□ -0.77
RAB40C-202ENST00000509637 NTM-AS1Q6ZSK4 140 aa10.24□□□□□ -0.77
RAB40C-202ENST00000509637 OR11H4Q8NGC9 324 aa10.24□□□□□ -0.77
RAB40C-202ENST00000509637 RMI2Q96E14 147 aa10.24□□□□□ -0.77
RAB40C-202ENST00000509637 MBP02144 154 aa10.23□□□□□ -0.77
RAB40C-202ENST00000509637 NEXN-AS1Q8NBZ9 246 aa10.23□□□□□ -0.77
RAB40C-202ENST00000509637 TRBV7-3A0A075B6L6 115 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 A0A087WX48 190 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 CTXND1A0A1B0GTU2 59 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 USP17L23D6RBM5 183 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 G3V3Q6 166 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 RPL19P84098 196 aaKnown RBP10.22□□□□□ -0.77
RAB40C-202ENST00000509637 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 PRR27Q6MZM9 219 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 C15orf54Q8N8G6 183 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 OR10G8Q8NGN5 311 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 CHCHD7Q9BUK0 85 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 PLA2G2DQ9UNK4 145 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 URGCP-MRPS24S4R325 110 aa10.22□□□□□ -0.77
RAB40C-202ENST00000509637 TRBV6-8A0A0A6YYG3 113 aa10.21□□□□□ -0.77
RAB40C-202ENST00000509637 RPL37AP61513 92 aaKnown RBP10.21□□□□□ -0.77
RAB40C-202ENST00000509637 SYT8Q8NBV8 401 aa10.21□□□□□ -0.77
RAB40C-202ENST00000509637 PHLDA3Q9Y5J5 127 aa10.21□□□□□ -0.77
RAB40C-202ENST00000509637 MUC21A0A0G2JKD1 596 aa10.2□□□□□ -0.78
RAB40C-202ENST00000509637 TRBV10-1A0A0K0K1A3 114 aa10.2□□□□□ -0.78
RAB40C-202ENST00000509637 MUC21A0A140T8X8 626 aa10.2□□□□□ -0.78
RAB40C-202ENST00000509637 TMEM262E9PQX1 116 aa10.2□□□□□ -0.78
RAB40C-202ENST00000509637 RPL36AP83881 106 aaKnown RBP10.2□□□□□ -0.78
RAB40C-202ENST00000509637 FAM162BQ5T6X4 162 aa10.2□□□□□ -0.78
RAB40C-202ENST00000509637 OR10AG1Q8NH19 301 aa10.2□□□□□ -0.78
RAB40C-202ENST00000509637 RPL36ALQ969Q0 106 aaKnown RBP10.2□□□□□ -0.78
RAB40C-202ENST00000509637 HIST1H2BAQ96A08 127 aa10.2□□□□□ -0.78
RAB40C-202ENST00000509637 ZFP30Q9Y2G7 519 aa10.2□□□□□ -0.78
RAB40C-202ENST00000509637 LTAP01374 205 aa10.19□□□□□ -0.78
RAB40C-202ENST00000509637 TPT1P13693 172 aaKnown RBP10.19□□□□□ -0.78
RAB40C-202ENST00000509637 SDIM1Q6ZPB5 146 aa10.19□□□□□ -0.78
RAB40C-202ENST00000509637 C9orf163Q8N9P6 203 aa10.19□□□□□ -0.78
RAB40C-202ENST00000509637 C1orf43Q9BWL3 253 aa10.19□□□□□ -0.78
RAB40C-202ENST00000509637 CYTL1Q9NRR1 136 aa10.19□□□□□ -0.78
RAB40C-202ENST00000509637 TRBV6-1A0A0K0K1D8 114 aa10.18□□□□□ -0.78
RAB40C-202ENST00000509637 FHITP49789 147 aa10.18□□□□□ -0.78
RAB40C-202ENST00000509637 Q0VG73 95 aa10.18□□□□□ -0.78
RAB40C-202ENST00000509637 ELOBQ15370 118 aa10.18□□□□□ -0.78
RAB40C-202ENST00000509637 KIF25-AS1Q9Y6Z4 181 aa10.18□□□□□ -0.78
RAB40C-202ENST00000509637 ANGP03950 147 aaKnown RBP10.17□□□□□ -0.78
RAB40C-202ENST00000509637 SLPIP03973 132 aa10.17□□□□□ -0.78
RAB40C-202ENST00000509637 GIPP09681 153 aaPredicted RBP10.17□□□□□ -0.78
RAB40C-202ENST00000509637 CLPSL2Q6UWE3 100 aa10.17□□□□□ -0.78
RAB40C-202ENST00000509637 ZFP82Q8N141 532 aa10.17□□□□□ -0.78
RAB40C-202ENST00000509637 PRR34Q9NV39 138 aa10.17□□□□□ -0.78
RAB40C-202ENST00000509637 HLA-DQA1P01909 254 aa10.16□□□□□ -0.78
RAB40C-202ENST00000509637 SEC11BP0C7V7 166 aa10.16□□□□□ -0.78
RAB40C-202ENST00000509637 RAB4BP61018 213 aa10.16□□□□□ -0.78
RAB40C-202ENST00000509637 FMC1Q96HJ9 113 aa10.16□□□□□ -0.78
RAB40C-202ENST00000509637 SSBP4Q9BWG4 385 aaPredicted RBP10.16□□□□□ -0.78
RAB40C-202ENST00000509637 MAP1LC3B2A6NCE7 125 aa10.15□□□□□ -0.78
RAB40C-202ENST00000509637 RBX1P62877 108 aa10.15□□□□□ -0.78
RAB40C-202ENST00000509637 MLST8Q9BVC4 326 aa10.15□□□□□ -0.78
RAB40C-202ENST00000509637 MAP1LC3BQ9GZQ8 125 aa10.15□□□□□ -0.78
RAB40C-202ENST00000509637 GFRA4Q9GZZ7 299 aa10.15□□□□□ -0.78
RAB40C-202ENST00000509637 FXYD6-FXYD2A0A087WZ82 144 aa10.14□□□□□ -0.79
RAB40C-202ENST00000509637 SNAI2O43623 268 aa10.14□□□□□ -0.79
RAB40C-202ENST00000509637 GAGE6Q13070 117 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms