RNA–Protein interactions for RNA: ENST00000508909.5

FRAS1-204, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 2

Gene FRAS1, Length 2,297 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-204ENST00000508909 VCYO14598 125 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 UBE2D1P51668 147 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 PMVKQ15126 192 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 SPAG8Q99932 426 aaPredicted RBP11.9□□□□□ -0.5
FRAS1-204ENST00000508909 PGPEP1Q9NXJ5 209 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 MDFICQ9P1T7 246 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 CRYBG3Q68DQ2 2970 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 F5H697 171 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 TSPEAR-AS2P59090 65 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 SCGB2A2Q13296 93 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 SCGB1D4Q6XE38 83 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 ZNRF2Q8NHG8 242 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 CCL19Q99731 98 aa11.9□□□□□ -0.5
FRAS1-204ENST00000508909 ID1P41134 155 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 PRORYQ9H606 182 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 CFAP46Q8IYW2 2715 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 TRAV12-2A0A075B6T6 113 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 IGHV3-16A0A0C4DH30 117 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 A0A0J9YY99 117 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 TRBV27A0A0K0K1C4 114 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 LINC01549A6NIU2 74 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 LGALS9O00182 355 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 MSMBP08118 114 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 INSL3P51460 131 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 C9orf85Q96MD7 179 aa11.89□□□□□ -0.51
FRAS1-204ENST00000508909 ZNF688P0C7X2 276 aa11.88□□□□□ -0.51
FRAS1-204ENST00000508909 PSMB8P28062 276 aa11.88□□□□□ -0.51
FRAS1-204ENST00000508909 SRSF9Q13242 221 aaKnown RBP eCLIP11.88□□□□□ -0.51
FRAS1-204ENST00000508909 TSSC4Q9Y5U2 329 aaPredicted RBP11.88□□□□□ -0.51
FRAS1-204ENST00000508909 SORL1Q92673 2214 aa11.88□□□□□ -0.51
FRAS1-204ENST00000508909 TRBV6-5A0A0K0K1A5 114 aa11.88□□□□□ -0.51
FRAS1-204ENST00000508909 IGKV3-20P01619 116 aa11.88□□□□□ -0.51
FRAS1-204ENST00000508909 TMEM141Q96I45 108 aa11.88□□□□□ -0.51
FRAS1-204ENST00000508909 TIMM17AQ99595 171 aa11.88□□□□□ -0.51
FRAS1-204ENST00000508909 KIR2DL4Q99706 377 aa11.88□□□□□ -0.51
FRAS1-204ENST00000508909 ATP5J2P56134 94 aa11.87□□□□□ -0.51
FRAS1-204ENST00000508909 FAM74A4Q5TZK3 123 aa11.87□□□□□ -0.51
FRAS1-204ENST00000508909 CLEC2AQ6UVW9 174 aa11.87□□□□□ -0.51
FRAS1-204ENST00000508909 AMELXQ99217 191 aa11.87□□□□□ -0.51
FRAS1-204ENST00000508909 MRPL16Q9NX20 251 aaKnown RBP11.87□□□□□ -0.51
FRAS1-204ENST00000508909 M0QY20 66 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 NDUFS8O00217 210 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 TSPAN13O95857 204 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 SMCPP49901 116 aaPredicted RBP11.86□□□□□ -0.51
FRAS1-204ENST00000508909 ZNF876PQ49A33 203 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 OPRPNQ99935 248 aaPredicted RBP11.86□□□□□ -0.51
FRAS1-204ENST00000508909 GTSF1LQ9H1H1 148 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 ZNF580Q9UK33 172 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 FLNCQ14315 2725 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 A0A0J9YX75 114 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 GAGE12HA6NDE8 117 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 AZU1P20160 251 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 PAPPA-AS1Q5QFB9 102 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 SFTA2Q6UW10 78 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 Q8N1Y9 231 aa11.86□□□□□ -0.51
FRAS1-204ENST00000508909 ZNF256Q9Y2P7 627 aaPredicted RBP11.86□□□□□ -0.51
FRAS1-204ENST00000508909 P0DMU3 169 aa11.85□□□□□ -0.51
FRAS1-204ENST00000508909 FAM231AP0DMU4 169 aa11.85□□□□□ -0.51
FRAS1-204ENST00000508909 FAM231CP0DMU5 169 aa11.85□□□□□ -0.51
FRAS1-204ENST00000508909 TMEM238LA0A1B0GVL6 79 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 A6NJY4 79 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 IGHV4-59P01825 116 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 TMEM170BQ5T4T1 132 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 APOMO95445 188 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 IGHV3-30P01768 117 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 IGHV3-30-5P0DP03 117 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 UBE2D3P61077 147 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 UBE2D2P62837 147 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 CFAP126Q5VTH2 177 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 NDUFA11Q86Y39 141 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 ODF3Q96PU9 254 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 SIGMAR1Q99720 223 aa11.84□□□□□ -0.51
FRAS1-204ENST00000508909 K7EQG2 157 aa11.83□□□□□ -0.52
FRAS1-204ENST00000508909 HERVK_113P61574 105 aa11.83□□□□□ -0.52
FRAS1-204ENST00000508909 SAMD13Q5VXD3 122 aa11.83□□□□□ -0.52
FRAS1-204ENST00000508909 SLC25A29Q8N8R3 303 aa11.83□□□□□ -0.52
FRAS1-204ENST00000508909 DOPEY2Q9Y3R5 2298 aa11.83□□□□□ -0.52
FRAS1-204ENST00000508909 PKD1L2Q7Z442 2459 aa11.83□□□□□ -0.52
FRAS1-204ENST00000508909 CSMD2Q7Z408 3487 aa11.83□□□□□ -0.52
FRAS1-204ENST00000508909 SPINK13Q1W4C9 94 aa11.83□□□□□ -0.52
FRAS1-204ENST00000508909 SPATA25Q9BR10 227 aa11.83□□□□□ -0.52
FRAS1-204ENST00000508909 CFC1BP0CG36 223 aa11.82□□□□□ -0.52
FRAS1-204ENST00000508909 CFC1P0CG37 223 aa11.82□□□□□ -0.52
FRAS1-204ENST00000508909 ZNF56Q15929 161 aa11.82□□□□□ -0.52
FRAS1-204ENST00000508909 DEFB112Q30KQ8 113 aa11.82□□□□□ -0.52
FRAS1-204ENST00000508909 USP9XQ93008 2570 aaPredicted RBP11.82□□□□□ -0.52
FRAS1-204ENST00000508909 UTP20O75691 2785 aaKnown RBP11.82□□□□□ -0.52
FRAS1-204ENST00000508909 IGHV1OR15-1A0A075B7D0 117 aa11.81□□□□□ -0.52
FRAS1-204ENST00000508909 DLX4Q92988 240 aaPredicted RBP11.81□□□□□ -0.52
FRAS1-204ENST00000508909 CREBBPQ92793 2442 aa11.81□□□□□ -0.52
FRAS1-204ENST00000508909 LOC107984156A0A0G2JMH3 177 aa11.81□□□□□ -0.52
FRAS1-204ENST00000508909 J3QQQ9 107 aa11.81□□□□□ -0.52
FRAS1-204ENST00000508909 J3QR89 54 aa11.81□□□□□ -0.52
FRAS1-204ENST00000508909 PSMB2P49721 201 aa11.81□□□□□ -0.52
FRAS1-204ENST00000508909 SMAGPQ0VAQ4 97 aa11.81□□□□□ -0.52
FRAS1-204ENST00000508909 NFE4Q86UQ8 179 aa11.81□□□□□ -0.52
FRAS1-204ENST00000508909 ARL17AQ8IVW1 177 aa11.81□□□□□ -0.52
FRAS1-204ENST00000508909 ZANQ9Y493 2812 aa11.8□□□□□ -0.52
FRAS1-204ENST00000508909 B4DSR2 109 aa11.8□□□□□ -0.52
FRAS1-204ENST00000508909 NSUN5P1Q3KNT7 163 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms