RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 IGKV1-5P01602 117 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 RD3LP0DJH9 198 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 CXCL3P19876 107 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 RAB4AP20338 218 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 FXYD4P59646 89 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 HSPE1P61604 102 aaKnown RBP1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 SUPT4H1P63272 117 aaKnown RBP1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 ST3GAL4Q11206 333 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 CCDC58Q4VC31 144 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 AADACL3Q5VUY0 350 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 FAM104BQ5XKR9 115 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 SFXN4Q6P4A7 337 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 ENHOQ6UWT2 76 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 IQCF2Q8IXL9 164 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 ZNF738Q8NE65 137 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 BPIFCQ8NFQ6 507 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 OR10P1Q8NGE3 313 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 Q8TAT8 98 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 ZNF431Q8TF32 576 aaPredicted RBP1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 Q8WTZ3 238 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 DYDC1Q8WWB3 177 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 DNAJC9Q8WXX5 260 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 UBE2WQ96B02 151 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 CCDC124Q96CT7 223 aaKnown RBP1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 ACY3Q96HD9 319 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 URGCP-MRPS24S4R325 110 aa1.56□□□□□ -2.16
TOPBP1-206ENST00000508524 A0A096LNI7 61 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 TRAV8-1A0A0A6YYK1 113 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 TRAV8-6A0A0B4J262 113 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 FAM24AA6NFZ4 105 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 SLC17A3O00476 420 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 GSTZ1O43708 216 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 PGLYRP1O75594 196 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 SNAPC5O75971 98 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 FAM107AO95990 144 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 PPYP01298 95 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 LINC00694P0DN24 101 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 RPL5P46777 297 aaKnown RBP1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 COX6A2Q02221 97 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 SSX1Q16384 188 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 HSD17B12Q53GQ0 312 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 C1orf194Q5T5A4 169 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 HACD4Q5VWC8 232 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 TMPRSS11AQ6ZMR5 421 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 NIT1Q86X76 327 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 OR8I2Q8N0Y5 310 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 DPH3Q96FX2 82 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 ATP6V1G3Q96LB4 118 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 C20orf144Q9BQM9 153 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 TXNDC17Q9BRA2 123 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 GABARAPL1Q9H0R8 117 aa1.55□□□□□ -2.16
TOPBP1-206ENST00000508524 TRAV30A0A087WSZ9 112 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 GGTLC3B5MD39 225 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 WBP4O75554 376 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 ORM1P02763 201 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 SNCAP37840 140 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 ERHP84090 104 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 RPL19P84098 196 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 CATR1Q13166 79 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 MSMO1Q15800 293 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 KRTAP25-1Q3LHN0 102 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 TMEM75Q8N9X5 138 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 FXYD6Q9H0Q3 95 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 GTSF1LQ9H1H1 148 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 ANXA10Q9UJ72 324 aa1.54□□□□□ -2.16
TOPBP1-206ENST00000508524 IGHV3-64A0A075B6Q5 118 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 IGHV3-73A0A0B4J1V6 119 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 TCRBV3S1A0A5B6 114 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 C7orf71A4D174 169 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 G3V2T6 193 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 TCRBP04435 133 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 PSMB9P28065 219 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 OR10A3P58181 314 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 FLOT2Q14254 428 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 RAB11BQ15907 218 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 KRTAP19-6Q3LI70 58 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 CDNFQ49AH0 187 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 PCOTHQ58A44 107 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 PDZD11Q5EBL8 140 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 FAM162BQ5T6X4 162 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 TMEM91Q6ZNR0 172 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 CROCCP2Q86T23 111 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 EIF4E3Q8N5X7 224 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 ZFAND2AQ8N6M9 145 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 MRPL48Q96GC5 212 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 FAM19A4Q96LR4 140 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 TMEM222Q9H0R3 208 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 GEMIN7Q9H840 131 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 FKBP11Q9NYL4 201 aa1.53□□□□□ -2.16
TOPBP1-206ENST00000508524 TRAV4A0A0B4J268 109 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 H3BRN7 92 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 M0R2T5 61 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 CORTO00230 105 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 UCHL1P09936 223 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 CTXN2P0C2S0 81 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 SLC25A4P12235 298 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 MYL9P24844 172 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 RNASE4P34096 147 aaKnown RBP1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 HTR2BP41595 481 aa1.52□□□□□ -2.17
TOPBP1-206ENST00000508524 POLR2GP62487 172 aaKnown RBP eCLIP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms