RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 NTN3O00634 580 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-210ENST00000508216 GAS8-AS1O95177 125 aa8.01□□□□□ -1.13
PDLIM5-210ENST00000508216 BLCAPP62952 87 aa8.01□□□□□ -1.13
PDLIM5-210ENST00000508216 PDE6HQ13956 83 aa8.01□□□□□ -1.13
PDLIM5-210ENST00000508216 C2orf66Q6UXQ4 117 aa8.01□□□□□ -1.13
PDLIM5-210ENST00000508216 TIMM17AQ99595 171 aa8.01□□□□□ -1.13
PDLIM5-210ENST00000508216 DOCK7Q96N67 2140 aa8.01□□□□□ -1.13
PDLIM5-210ENST00000508216 PRSS38A1L453 326 aa8□□□□□ -1.13
PDLIM5-210ENST00000508216 M0R381 172 aa8□□□□□ -1.13
PDLIM5-210ENST00000508216 ERC2-IT1O76042 136 aa8□□□□□ -1.13
PDLIM5-210ENST00000508216 CXorf67Q86X51 503 aaPredicted RBP8□□□□□ -1.13
PDLIM5-210ENST00000508216 Q8NA96 180 aa8□□□□□ -1.13
PDLIM5-210ENST00000508216 OVOL2Q9BRP0 275 aa8□□□□□ -1.13
PDLIM5-210ENST00000508216 PPP1R17O96001 155 aa7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 BAALC-AS2P0C853 105 aa7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 ERHP84090 104 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 HOXA4Q00056 320 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 ZNF876PQ49A33 203 aa7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 PRRC2AP48634 2157 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 IGKV3D-7A0A0C4DH55 119 aa7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 F8WEM9 126 aa7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 IGHV4-34P06331 123 aa7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 RUSC1-AS1Q66K80 236 aa7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 PHF5AQ7RTV0 110 aaKnown RBP7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 SPRR3Q9UBC9 169 aa7.99□□□□□ -1.13
PDLIM5-210ENST00000508216 EGR2P11161 476 aaPredicted RBP7.98□□□□□ -1.13
PDLIM5-210ENST00000508216 RPL28P46779 137 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-210ENST00000508216 MIAQ16674 131 aa7.98□□□□□ -1.13
PDLIM5-210ENST00000508216 UNQ9165/PRO28630Q6UXU0 137 aa7.98□□□□□ -1.13
PDLIM5-210ENST00000508216 NDUFA4L2Q9NRX3 87 aa7.98□□□□□ -1.13
PDLIM5-210ENST00000508216 LINC00846Q9NV44 126 aa7.98□□□□□ -1.13
PDLIM5-210ENST00000508216 CACNA1DQ01668 2161 aa7.98□□□□□ -1.13
PDLIM5-210ENST00000508216 E7EQL1 145 aa7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 M0R378 163 aa7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 SPRY3O43610 288 aa7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 Q6ZVQ6 151 aa7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 DCTN5Q9BTE1 182 aa7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 LINC00588Q9Y4M8 146 aa7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 MIFP14174 115 aa7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 SUMO2P61956 95 aaKnown RBP7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 MUC3AQ02505 3323 aa7.97□□□□□ -1.13
PDLIM5-210ENST00000508216 POLEQ07864 2286 aa7.96□□□□□ -1.13
PDLIM5-210ENST00000508216 DSCAMO60469 2012 aa7.96□□□□□ -1.14
PDLIM5-210ENST00000508216 IGHV5-10-1A0A0J9YXX1 117 aa7.96□□□□□ -1.14
PDLIM5-210ENST00000508216 C8orf87E5RJ46 101 aa7.96□□□□□ -1.14
PDLIM5-210ENST00000508216 GRPP07492 148 aa7.96□□□□□ -1.14
PDLIM5-210ENST00000508216 LINC00205P59089 165 aa7.96□□□□□ -1.14
PDLIM5-210ENST00000508216 DYNLRB2Q8TF09 96 aa7.96□□□□□ -1.14
PDLIM5-210ENST00000508216 NACAE9PAV3 2078 aa7.96□□□□□ -1.14
PDLIM5-210ENST00000508216 EYSQ5T1H1 3165 aa7.95□□□□□ -1.14
PDLIM5-210ENST00000508216 K7EMT4 169 aa7.95□□□□□ -1.14
PDLIM5-210ENST00000508216 Q0VFX4 171 aa7.95□□□□□ -1.14
PDLIM5-210ENST00000508216 MLANAQ16655 118 aa7.95□□□□□ -1.14
PDLIM5-210ENST00000508216 C8orf49Q96NF6 230 aa7.95□□□□□ -1.14
PDLIM5-210ENST00000508216 MSRB1Q9NZV6 116 aa7.95□□□□□ -1.14
PDLIM5-210ENST00000508216 M0R1W7 72 aa7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 IGHV1-69P01742 117 aa7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 RNASE4P34096 147 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 C11orf68Q9H3H3 251 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 RTTNQ86VV8 2226 aa7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 IGKV1D-17A0A075B6S4 117 aa7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 TSHBP01222 138 aa7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 TRBV12-3P01733 135 aa7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 UBE2BP63146 152 aa7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 RPP25Q9BUL9 199 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 BPESC1Q9GZL8 116 aa7.94□□□□□ -1.14
PDLIM5-210ENST00000508216 PSPNO60542 156 aa7.93□□□□□ -1.14
PDLIM5-210ENST00000508216 TTC28Q96AY4 2481 aa7.93□□□□□ -1.14
PDLIM5-210ENST00000508216 CD59P13987 128 aa7.92□□□□□ -1.14
PDLIM5-210ENST00000508216 PRUNE2Q8WUY3 3088 aa7.92□□□□□ -1.14
PDLIM5-210ENST00000508216 LHBP01229 141 aa7.92□□□□□ -1.14
PDLIM5-210ENST00000508216 RFPL3SP0C7P2 107 aa7.92□□□□□ -1.14
PDLIM5-210ENST00000508216 FAM229BQ4G0N7 80 aa7.92□□□□□ -1.14
PDLIM5-210ENST00000508216 SPATA3Q8NHX4 192 aa7.92□□□□□ -1.14
PDLIM5-210ENST00000508216 TRBV7-4A0A0J9YYF1 115 aa7.91□□□□□ -1.14
PDLIM5-210ENST00000508216 UBE2L6O14933 153 aa7.91□□□□□ -1.14
PDLIM5-210ENST00000508216 CD28P10747 220 aa7.91□□□□□ -1.14
PDLIM5-210ENST00000508216 TMEM30BQ3MIR4 351 aa7.91□□□□□ -1.14
PDLIM5-210ENST00000508216 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
PDLIM5-210ENST00000508216 MPLKIPQ8TAP9 179 aa7.91□□□□□ -1.14
PDLIM5-210ENST00000508216 LAMA2P24043 3122 aaKnown RBP7.9□□□□□ -1.14
PDLIM5-210ENST00000508216 TRAV23DV6A0A075B6W5 121 aa7.9□□□□□ -1.14
PDLIM5-210ENST00000508216 H3BRN7 92 aa7.9□□□□□ -1.14
PDLIM5-210ENST00000508216 NOTCH4Q99466 2003 aa7.9□□□□□ -1.14
PDLIM5-210ENST00000508216 A0A087WWL8 130 aa7.89□□□□□ -1.15
PDLIM5-210ENST00000508216 RPL39P5Q59GN2 51 aa7.89□□□□□ -1.15
PDLIM5-210ENST00000508216 LY6G5CQ5SRR4 150 aa7.89□□□□□ -1.15
PDLIM5-210ENST00000508216 RMI2Q96E14 147 aa7.89□□□□□ -1.15
PDLIM5-210ENST00000508216 SOCS3O14543 225 aa7.89□□□□□ -1.15
PDLIM5-210ENST00000508216 ZNF73O43830 326 aaPredicted RBP7.89□□□□□ -1.15
PDLIM5-210ENST00000508216 ZNF833PQ6ZTB9 187 aa7.88□□□□□ -1.15
PDLIM5-210ENST00000508216 TMEM167AQ8TBQ9 72 aa7.88□□□□□ -1.15
PDLIM5-210ENST00000508216 CCL13Q99616 98 aa7.88□□□□□ -1.15
PDLIM5-210ENST00000508216 MRPL36Q9P0J6 103 aaKnown RBP7.88□□□□□ -1.15
PDLIM5-210ENST00000508216 TRGV3P03979 118 aa7.87□□□□□ -1.15
PDLIM5-210ENST00000508216 C22orf34Q6ZV56 151 aa7.87□□□□□ -1.15
PDLIM5-210ENST00000508216 PHLDA3Q9Y5J5 127 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms