RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 FGF22Q9HCT0 170 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 F5P12259 2224 aa5.17□□□□□ -1.58
PDGFRA-206ENST00000508170 TANC2Q9HCD6 1990 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 IGLV3-12A0A075B6K2 115 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 IGKV1D-33P01593 117 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 IGKV1-33P01594 117 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 ZNF563Q8TA94 476 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 LINC00474Q9P2X8 69 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 TRAV17A0A0B4J275 112 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 IBA57-AS1B1ANH7 110 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 BPY2O14599 106 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 SLC25A20O43772 301 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 IFI6P09912 130 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 IGFBP7Q16270 282 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 DEFB134Q4QY38 66 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 SERP2Q8N6R1 65 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 DOCK7Q96N67 2140 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 SLC50A1Q9BRV3 221 aa5.16□□□□□ -1.58
PDGFRA-206ENST00000508170 TRBV24-1A0A075B6N3 115 aa5.15□□□□□ -1.58
PDGFRA-206ENST00000508170 A0A1B0GWA3 101 aa5.15□□□□□ -1.58
PDGFRA-206ENST00000508170 LY6HO94772 140 aa5.15□□□□□ -1.58
PDGFRA-206ENST00000508170 CYSTM1Q9H1C7 97 aa5.15□□□□□ -1.58
PDGFRA-206ENST00000508170 ZNF581Q9P0T4 197 aa5.15□□□□□ -1.58
PDGFRA-206ENST00000508170 TET2Q6N021 2002 aaPredicted RBP5.15□□□□□ -1.59
PDGFRA-206ENST00000508170 MUC3AQ02505 3323 aa5.15□□□□□ -1.59
PDGFRA-206ENST00000508170 C17orf51A8MQB3 221 aa5.15□□□□□ -1.59
PDGFRA-206ENST00000508170 PRH1P02810 166 aa5.15□□□□□ -1.59
PDGFRA-206ENST00000508170 MIAQ16674 131 aa5.15□□□□□ -1.59
PDGFRA-206ENST00000508170 IGFL4Q6B9Z1 124 aa5.15□□□□□ -1.59
PDGFRA-206ENST00000508170 CYSRT1A8MQ03 144 aa5.14□□□□□ -1.59
PDGFRA-206ENST00000508170 ASB16-AS1Q495Z4 193 aa5.14□□□□□ -1.59
PDGFRA-206ENST00000508170 CIRBP-AS1Q8TBR5 109 aa5.14□□□□□ -1.59
PDGFRA-206ENST00000508170 SMCR5Q8TEV8 140 aa5.14□□□□□ -1.59
PDGFRA-206ENST00000508170 NXT2Q9NPJ8 142 aaKnown RBP5.14□□□□□ -1.59
PDGFRA-206ENST00000508170 H0YGG7 62 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 LECT2O14960 151 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 GNRH2O43555 120 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 HSPB1P04792 205 aaKnown RBP5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 TLX1NBP0CAT3 122 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 LINC01590Q5TEZ4 76 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 SMDT1Q9H4I9 107 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 TTC28Q96AY4 2481 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 TRAV2A0A0B4J234 112 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 LOC107984156A0A0G2JMH3 177 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 RNASE2P10153 161 aaKnown RBP5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 RPS27P42677 84 aaKnown RBP5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 RPL28P46779 137 aaKnown RBP5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 RHOHQ15669 191 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 SMIM29Q86T20 159 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 ARL17AQ8IVW1 177 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 HIGD1BQ9P298 99 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 CACNA1BQ00975 2339 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 KNL1Q8NG31 2342 aa5.13□□□□□ -1.59
PDGFRA-206ENST00000508170 DNAH14Q0VDD8 3507 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 TMEM223A0PJW6 202 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 B4DSR2 109 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 SH2D1AO60880 128 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 ZNF525Q8N782 197 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 Q8N976 141 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 COL4A2P08572 1712 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 HEATR5AQ86XA9 2040 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 IGKV1D-17A0A075B6S4 117 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 NPYP01303 97 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 KRTDAPP60985 99 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 Q8IYB0 196 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 Q8N1X5 172 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 DEFB123Q8N688 67 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 C15orf56Q8N910 161 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 SCRT1Q9BWW7 348 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 TMEM14AQ9Y6G1 99 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 PLXNB1O43157 2135 aa5.12□□□□□ -1.59
PDGFRA-206ENST00000508170 SPTBP11277 2137 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 INSP01308 110 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 LPAL2Q16609 132 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 Q1T7F1 81 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 TRGV9Q99603 122 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 RPP21Q9H633 154 aaKnown RBP5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 MPDZO75970 2070 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 EML5Q05BV3 1969 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 LRP4O75096 1905 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 H3BMM0 161 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 UBE2WQ96B02 151 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 ODF3Q96PU9 254 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 U3KQK5 164 aa5.11□□□□□ -1.59
PDGFRA-206ENST00000508170 BRWD1Q9NSI6 2320 aa5.1□□□□□ -1.59
PDGFRA-206ENST00000508170 IGLV1-51P01701 117 aa5.1□□□□□ -1.59
PDGFRA-206ENST00000508170 MPV17P39210 176 aa5.1□□□□□ -1.59
PDGFRA-206ENST00000508170 NTM-AS1Q6ZSK4 140 aa5.1□□□□□ -1.59
PDGFRA-206ENST00000508170 Q8N814 137 aa5.1□□□□□ -1.59
PDGFRA-206ENST00000508170 Q8NDZ9 215 aa5.1□□□□□ -1.59
PDGFRA-206ENST00000508170 PATE1Q8WXA2 126 aa5.1□□□□□ -1.59
PDGFRA-206ENST00000508170 TVP23CQ96ET8 276 aa5.1□□□□□ -1.59
PDGFRA-206ENST00000508170 CHD8Q9HCK8 2581 aa5.1□□□□□ -1.59
PDGFRA-206ENST00000508170 TDRD6O60522 2096 aaKnown RBP5.09□□□□□ -1.59
PDGFRA-206ENST00000508170 IGLV11-55A0A075B6I3 123 aa5.09□□□□□ -1.59
PDGFRA-206ENST00000508170 C17orf112F2Z3M2 114 aa5.09□□□□□ -1.59
PDGFRA-206ENST00000508170 IGLV3-21P80748 117 aaPredicted RBP5.09□□□□□ -1.59
PDGFRA-206ENST00000508170 MPV17LQ2QL34 196 aa5.09□□□□□ -1.59
PDGFRA-206ENST00000508170 CFAP126Q5VTH2 177 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms