RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-261	ENST00000507901	LYPD5	Q6UWN5	251 aa		11.25	□□□□□ -0.61
DDR1-261	ENST00000507901	NEGR1	Q7Z3B1	354 aa		11.25	□□□□□ -0.61
DDR1-261	ENST00000507901	FER1L6-AS1	Q8NA97	138 aa		11.25	□□□□□ -0.61
DDR1-261	ENST00000507901	CNFN	Q9BYD5	112 aa		11.25	□□□□□ -0.61
DDR1-261	ENST00000507901	RPP21	Q9H633	154 aa	Known RBP	11.25	□□□□□ -0.61
DDR1-261	ENST00000507901	KIF25-AS1	Q9Y6Z4	181 aa		11.25	□□□□□ -0.61
DDR1-261	ENST00000507901	ZNF727	A8MUV8	499 aa		11.24	□□□□□ -0.61
DDR1-261	ENST00000507901	SRI	P30626	198 aa		11.24	□□□□□ -0.61
DDR1-261	ENST00000507901	CTRL	P40313	264 aa		11.24	□□□□□ -0.61
DDR1-261	ENST00000507901	CEBPG	P53567	150 aa		11.24	□□□□□ -0.61
DDR1-261	ENST00000507901	PEA15	Q15121	130 aa		11.24	□□□□□ -0.61
DDR1-261	ENST00000507901		Q9UF83	564 aa		11.24	□□□□□ -0.61
DDR1-261	ENST00000507901	DNAH17	Q9UFH2	4485 aa		11.24	□□□□□ -0.61
DDR1-261	ENST00000507901		A0A087WWL8	130 aa		11.23	□□□□□ -0.61
DDR1-261	ENST00000507901	MUC21	A0A0G2JKD1	596 aa		11.23	□□□□□ -0.61
DDR1-261	ENST00000507901	MUC21	A0A140T8X8	626 aa		11.23	□□□□□ -0.61
DDR1-261	ENST00000507901	TIRAP	P58753	221 aa		11.23	□□□□□ -0.61
DDR1-261	ENST00000507901	LINC00315	P59091	139 aa		11.23	□□□□□ -0.61
DDR1-261	ENST00000507901	FAM74A3	Q4VXF1	159 aa		11.23	□□□□□ -0.61
DDR1-261	ENST00000507901	CLLU1	Q5K131	121 aa		11.23	□□□□□ -0.61
DDR1-261	ENST00000507901	C14orf178	Q8N769	122 aa	Predicted RBP	11.23	□□□□□ -0.61
DDR1-261	ENST00000507901	FAT2	Q9NYQ8	4349 aa		11.23	□□□□□ -0.61
DDR1-261	ENST00000507901		A0A1W2PPQ1	181 aa		11.22	□□□□□ -0.61
DDR1-261	ENST00000507901	XKRY2	A2RUG3	117 aa		11.22	□□□□□ -0.61
DDR1-261	ENST00000507901	CT83	Q5H943	113 aa		11.22	□□□□□ -0.61
DDR1-261	ENST00000507901	GTSF1	Q8WW33	167 aa		11.22	□□□□□ -0.61
DDR1-261	ENST00000507901	PRADC1	Q9BSG0	188 aa		11.22	□□□□□ -0.61
DDR1-261	ENST00000507901	IGLV2-18	A0A075B6J9	118 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901		F2Z2F3	143 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901	FAM74A4	Q5TZK3	123 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901	SPANXN1	Q5VSR9	72 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901	WDR73	Q6P4I2	378 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901	LYZL1	Q6UWQ5	148 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901	SH2D6	Q7Z4S9	175 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901	KRTAP1-5	Q9BYS1	174 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901		Q9H8V8	135 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901	OSTC	Q9NRP0	149 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901	MSRB1	Q9NZV6	116 aa		11.21	□□□□□ -0.61
DDR1-261	ENST00000507901	NBDY	A0A0U1RRE5	68 aa		11.2	□□□□□ -0.62
DDR1-261	ENST00000507901	FOXA3	P55318	350 aa	Predicted RBP	11.2	□□□□□ -0.62
DDR1-261	ENST00000507901	RPL23	P62829	140 aa	Known RBP	11.2	□□□□□ -0.62
DDR1-261	ENST00000507901	CACNG7	P62955	275 aa		11.2	□□□□□ -0.62
DDR1-261	ENST00000507901	ISOC2	Q96AB3	205 aa		11.2	□□□□□ -0.62
DDR1-261	ENST00000507901		M0R2N4	97 aa		11.19	□□□□□ -0.62
DDR1-261	ENST00000507901	GATC	O43716	136 aa	Known RBP	11.19	□□□□□ -0.62
DDR1-261	ENST00000507901	RAB4B	P61018	213 aa		11.19	□□□□□ -0.62
DDR1-261	ENST00000507901	TMEM241	Q24JQ0	296 aa		11.19	□□□□□ -0.62
DDR1-261	ENST00000507901	NAT8	Q9UHE5	227 aa		11.19	□□□□□ -0.62
DDR1-261	ENST00000507901	TRBV10-1	A0A0K0K1A3	114 aa		11.18	□□□□□ -0.62
DDR1-261	ENST00000507901	RTL8C	O15255	209 aa		11.18	□□□□□ -0.62
DDR1-261	ENST00000507901	ERVFC1-1	P60608	527 aa		11.18	□□□□□ -0.62
DDR1-261	ENST00000507901	RAB14	P61106	215 aa		11.18	□□□□□ -0.62
DDR1-261	ENST00000507901	OR10G8	Q8NGN5	311 aa		11.18	□□□□□ -0.62
DDR1-261	ENST00000507901	AP1S3	Q96PC3	154 aa		11.18	□□□□□ -0.62
DDR1-261	ENST00000507901		V9GYV3	84 aa		11.18	□□□□□ -0.62
DDR1-261	ENST00000507901	NTF3	P20783	257 aa		11.17	□□□□□ -0.62
DDR1-261	ENST00000507901	TPPP3	Q9BW30	176 aa		11.17	□□□□□ -0.62
DDR1-261	ENST00000507901	FAM231B	A6NCW3	169 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	GAGE12J	A6NER3	117 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901		A8MWL6	223 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	GAGE1	Q13065	139 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	GAGE4	Q13068	117 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	GAGE5	Q13069	117 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	GAGE13	Q4V321	117 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	SOHLH1	Q5JUK2	328 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	LINC00336	Q6ZUF6	198 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	ATP6V0E2	Q8NHE4	81 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	TSKU	Q8WUA8	353 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	GFRA4	Q9GZZ7	299 aa		11.16	□□□□□ -0.62
DDR1-261	ENST00000507901	HECTD4	Q9Y4D8	3996 aa		11.15	□□□□□ -0.62
DDR1-261	ENST00000507901	SIVA1	O15304	175 aa		11.15	□□□□□ -0.62
DDR1-261	ENST00000507901	EVI2A	P22794	236 aa		11.15	□□□□□ -0.62
DDR1-261	ENST00000507901	SST	P61278	116 aa		11.15	□□□□□ -0.62
DDR1-261	ENST00000507901	WFDC10B	Q8IUB3	73 aa		11.15	□□□□□ -0.62
DDR1-261	ENST00000507901	GTSF1L	Q9H1H1	148 aa		11.15	□□□□□ -0.62
DDR1-261	ENST00000507901	DNAH10OS	P0CZ25	163 aa		11.14	□□□□□ -0.63
DDR1-261	ENST00000507901	UBE2D3	P61077	147 aa		11.14	□□□□□ -0.63
DDR1-261	ENST00000507901	UBE2D2	P62837	147 aa		11.14	□□□□□ -0.63
DDR1-261	ENST00000507901	NEXN-AS1	Q8NBZ9	246 aa		11.14	□□□□□ -0.63
DDR1-261	ENST00000507901	TRGC1	P0CF51	173 aa		11.13	□□□□□ -0.63
DDR1-261	ENST00000507901	ADIRF	Q15847	76 aa		11.13	□□□□□ -0.63
DDR1-261	ENST00000507901	ZNF56	Q15929	161 aa		11.13	□□□□□ -0.63
DDR1-261	ENST00000507901	TTC32	Q5I0X7	151 aa		11.13	□□□□□ -0.63
DDR1-261	ENST00000507901	LELP1	Q5T871	98 aa		11.13	□□□□□ -0.63
DDR1-261	ENST00000507901	TRBV7-3	A0A075B6L6	115 aa		11.12	□□□□□ -0.63
DDR1-261	ENST00000507901		M0QY20	66 aa		11.12	□□□□□ -0.63
DDR1-261	ENST00000507901	C15orf54	Q8N8G6	183 aa		11.12	□□□□□ -0.63
DDR1-261	ENST00000507901	DPH3P1	Q9H4G8	78 aa		11.12	□□□□□ -0.63
DDR1-261	ENST00000507901	HIGD1C	A8MV81	97 aa		11.11	□□□□□ -0.63
DDR1-261	ENST00000507901	SMIM17	P0DL12	118 aa		11.11	□□□□□ -0.63
DDR1-261	ENST00000507901	BTF3	P20290	206 aa	Known RBP	11.11	□□□□□ -0.63
DDR1-261	ENST00000507901	TWIST1	Q15672	202 aa		11.11	□□□□□ -0.63
DDR1-261	ENST00000507901	C1orf134	Q5TEV5	83 aa		11.11	□□□□□ -0.63
DDR1-261	ENST00000507901	SUMO4	Q6EEV6	95 aa		11.11	□□□□□ -0.63
DDR1-261	ENST00000507901	PGLYRP4	Q96LB8	373 aa		11.11	□□□□□ -0.63
DDR1-261	ENST00000507901	PKD1	P98161	4303 aa		11.11	□□□□□ -0.63
DDR1-261	ENST00000507901	RPL36A	P83881	106 aa	Known RBP	11.1	□□□□□ -0.63
DDR1-261	ENST00000507901	LINC01556	Q5JQF7	62 aa		11.1	□□□□□ -0.63
DDR1-261	ENST00000507901	C6orf223	Q8N319	242 aa		11.1	□□□□□ -0.63
DDR1-261	ENST00000507901	RPL36AL	Q969Q0	106 aa	Known RBP	11.1	□□□□□ -0.63

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