RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 TRAV8-6A0A0B4J262 113 aa10.55□□□□□ -0.72
MED28-204ENST00000506409 IGHV3-38A0A0C4DH36 116 aa10.55□□□□□ -0.72
MED28-204ENST00000506409 RAB19A4D1S5 217 aa10.55□□□□□ -0.72
MED28-204ENST00000506409 CRYGDP07320 174 aa10.55□□□□□ -0.72
MED28-204ENST00000506409 OR10J3Q5JRS4 329 aa10.55□□□□□ -0.72
MED28-204ENST00000506409 Q6ZRN7 208 aaPredicted RBP10.55□□□□□ -0.72
MED28-204ENST00000506409 C14orf178Q8N769 122 aaPredicted RBP10.55□□□□□ -0.72
MED28-204ENST00000506409 OR10AG1Q8NH19 301 aa10.55□□□□□ -0.72
MED28-204ENST00000506409 SMIM12Q96EX1 92 aa10.55□□□□□ -0.72
MED28-204ENST00000506409 GTSF1LQ9H1H1 148 aa10.55□□□□□ -0.72
MED28-204ENST00000506409 IGLV2-8P01709 118 aa10.54□□□□□ -0.72
MED28-204ENST00000506409 NKX2-5P52952 324 aaPredicted RBP10.54□□□□□ -0.72
MED28-204ENST00000506409 LELP1Q5T871 98 aa10.54□□□□□ -0.72
MED28-204ENST00000506409 NFE4Q86UQ8 179 aa10.54□□□□□ -0.72
MED28-204ENST00000506409 C10orf126Q8N4M7 172 aa10.54□□□□□ -0.72
MED28-204ENST00000506409 DAZAP1Q96EP5 407 aaKnown RBP10.54□□□□□ -0.72
MED28-204ENST00000506409 SSBP4Q9BWG4 385 aaPredicted RBP10.54□□□□□ -0.72
MED28-204ENST00000506409 Q9UF83 564 aa10.54□□□□□ -0.72
MED28-204ENST00000506409 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
MED28-204ENST00000506409 TNFRSF18Q9Y5U5 241 aa10.54□□□□□ -0.72
MED28-204ENST00000506409 DNAH11Q96DT5 4516 aa10.53□□□□□ -0.72
MED28-204ENST00000506409 SNAI2O43623 268 aa10.53□□□□□ -0.72
MED28-204ENST00000506409 OR5AL1P0C617 328 aa10.53□□□□□ -0.72
MED28-204ENST00000506409 LINC00694P0DN24 101 aa10.53□□□□□ -0.72
MED28-204ENST00000506409 BLOC1S1P78537 153 aa10.53□□□□□ -0.72
MED28-204ENST00000506409 LINC01556Q5JQF7 62 aa10.53□□□□□ -0.72
MED28-204ENST00000506409 SPANXN1Q5VSR9 72 aa10.53□□□□□ -0.72
MED28-204ENST00000506409 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
MED28-204ENST00000506409 TRBV20OR9-2A0A075B6H5 130 aa10.52□□□□□ -0.73
MED28-204ENST00000506409 MUC21A0A0G2JKD1 596 aa10.52□□□□□ -0.73
MED28-204ENST00000506409 MUC21A0A140T8X8 626 aa10.52□□□□□ -0.73
MED28-204ENST00000506409 C16orf90A8MZG2 172 aa10.52□□□□□ -0.73
MED28-204ENST00000506409 KIAA1109Q2LD37 5005 aa10.51□□□□□ -0.73
MED28-204ENST00000506409 DYNC1H1Q14204 4646 aaKnown RBP10.51□□□□□ -0.73
MED28-204ENST00000506409 SSTP61278 116 aa10.51□□□□□ -0.73
MED28-204ENST00000506409 SPATA12Q7Z6I5 190 aa10.51□□□□□ -0.73
MED28-204ENST00000506409 OR2D3Q8NGH3 330 aa10.51□□□□□ -0.73
MED28-204ENST00000506409 BIN3Q9NQY0 253 aa10.51□□□□□ -0.73
MED28-204ENST00000506409 TRBV10-1A0A0K0K1A3 114 aa10.5□□□□□ -0.73
MED28-204ENST00000506409 C19orf71A6NCJ1 209 aa10.5□□□□□ -0.73
MED28-204ENST00000506409 P01737 135 aa10.5□□□□□ -0.73
MED28-204ENST00000506409 GZMBP10144 247 aa10.5□□□□□ -0.73
MED28-204ENST00000506409 RPS20P60866 119 aaKnown RBP10.5□□□□□ -0.73
MED28-204ENST00000506409 ZNF56Q15929 161 aa10.5□□□□□ -0.73
MED28-204ENST00000506409 TPPP3Q9BW30 176 aa10.5□□□□□ -0.73
MED28-204ENST00000506409 A0A087WWC5 75 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 XKRY2A2RUG3 117 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 RBFOX3A6NFN3 312 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 IGHV3-30P01768 117 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 IGHV3-33P01772 117 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 IGHV3-30-3P0DP02 117 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 IGHV3-30-5P0DP03 117 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 ERVFC1-1P60608 527 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 RAB4BP61018 213 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 FER1L6-AS1Q8NA97 138 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 LYPD6BQ8NI32 183 aa10.49□□□□□ -0.73
MED28-204ENST00000506409 IGLC6P0CF74 106 aa10.48□□□□□ -0.73
MED28-204ENST00000506409 RPL36AP83881 106 aaKnown RBP10.48□□□□□ -0.73
MED28-204ENST00000506409 RPL36ALQ969Q0 106 aaKnown RBP10.48□□□□□ -0.73
MED28-204ENST00000506409 AP1S3Q96PC3 154 aa10.48□□□□□ -0.73
MED28-204ENST00000506409 TRBV7-3A0A075B6L6 115 aa10.47□□□□□ -0.73
MED28-204ENST00000506409 IBA57-AS1B1ANH7 110 aa10.47□□□□□ -0.73
MED28-204ENST00000506409 TMEM250H0YL14 139 aa10.47□□□□□ -0.73
MED28-204ENST00000506409 EREGO14944 169 aa10.47□□□□□ -0.73
MED28-204ENST00000506409 SMIM17P0DL12 118 aa10.47□□□□□ -0.73
MED28-204ENST00000506409 KRTAP10-2P60368 255 aa10.47□□□□□ -0.73
MED28-204ENST00000506409 HERC2O95714 4834 aa10.46□□□□□ -0.73
MED28-204ENST00000506409 F5H697 171 aa10.46□□□□□ -0.73
MED28-204ENST00000506409 OR10G8Q8NGN5 311 aa10.46□□□□□ -0.73
MED28-204ENST00000506409 F2Z2F3 143 aa10.45□□□□□ -0.74
MED28-204ENST00000506409 UBE2D3P61077 147 aa10.45□□□□□ -0.74
MED28-204ENST00000506409 UBE2D2P62837 147 aa10.45□□□□□ -0.74
MED28-204ENST00000506409 CACNG7P62955 275 aa10.45□□□□□ -0.74
MED28-204ENST00000506409 TOR2AQ5JU69 321 aa10.45□□□□□ -0.74
MED28-204ENST00000506409 Q8N3U1 123 aa10.45□□□□□ -0.74
MED28-204ENST00000506409 NUDT10Q8NFP7 164 aa10.45□□□□□ -0.74
MED28-204ENST00000506409 OCC1Q8TAD7 63 aa10.45□□□□□ -0.74
MED28-204ENST00000506409 NUDT11Q96G61 164 aa10.45□□□□□ -0.74
MED28-204ENST00000506409 Q9HAA7 133 aa10.45□□□□□ -0.74
MED28-204ENST00000506409 A0A087WTM6 91 aa10.44□□□□□ -0.74
MED28-204ENST00000506409 K7EN84 100 aa10.44□□□□□ -0.74
MED28-204ENST00000506409 PSCAO43653 123 aa10.44□□□□□ -0.74
MED28-204ENST00000506409 CEBPGP53567 150 aa10.44□□□□□ -0.74
MED28-204ENST00000506409 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
MED28-204ENST00000506409 EIF5A2Q9GZV4 153 aaKnown RBP10.44□□□□□ -0.74
MED28-204ENST00000506409 KIF25-AS1Q9Y6Z4 181 aa10.44□□□□□ -0.74
MED28-204ENST00000506409 LAGE3Q14657 143 aa10.43□□□□□ -0.74
MED28-204ENST00000506409 LYZL1Q6UWQ5 148 aa10.43□□□□□ -0.74
MED28-204ENST00000506409 RNASE7Q9H1E1 156 aaKnown RBP10.43□□□□□ -0.74
MED28-204ENST00000506409 RPP21Q9H633 154 aaKnown RBP10.43□□□□□ -0.74
MED28-204ENST00000506409 URGCP-MRPS24S4R325 110 aa10.43□□□□□ -0.74
MED28-204ENST00000506409 MGPP08493 103 aa10.42□□□□□ -0.74
MED28-204ENST00000506409 DAZ4Q86SG3 579 aaKnown RBP10.42□□□□□ -0.74
MED28-204ENST00000506409 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.42□□□□□ -0.74
MED28-204ENST00000506409 FAM210AQ96ND0 272 aa10.42□□□□□ -0.74
MED28-204ENST00000506409 DAZ3Q9NR90 486 aaKnown RBP10.42□□□□□ -0.74
MED28-204ENST00000506409 PGPEP1Q9NXJ5 209 aa10.42□□□□□ -0.74
MED28-204ENST00000506409 TRGC1P0CF51 173 aa10.41□□□□□ -0.74
MED28-204ENST00000506409 CTRLP40313 264 aa10.41□□□□□ -0.74
MED28-204ENST00000506409 NIT1Q86X76 327 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms