RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 LY96Q9Y6Y9 160 aa11.47□□□□□ -0.57
SNCA-209ENST00000506244 DNAH10Q8IVF4 4471 aa11.47□□□□□ -0.57
SNCA-209ENST00000506244 F2Z2F3 143 aa11.46□□□□□ -0.57
SNCA-209ENST00000506244 IGLC6P0CF74 106 aa11.46□□□□□ -0.57
SNCA-209ENST00000506244 BTF3P20290 206 aaKnown RBP11.46□□□□□ -0.57
SNCA-209ENST00000506244 CACNG7P62955 275 aa11.46□□□□□ -0.57
SNCA-209ENST00000506244 RPP21Q9H633 154 aaKnown RBP11.46□□□□□ -0.57
SNCA-209ENST00000506244 FRAS1Q86XX4 4008 aa11.45□□□□□ -0.58
SNCA-209ENST00000506244 K7EN84 100 aa11.45□□□□□ -0.58
SNCA-209ENST00000506244 CRYGDP07320 174 aa11.45□□□□□ -0.58
SNCA-209ENST00000506244 SMIM17P0DL12 118 aa11.45□□□□□ -0.58
SNCA-209ENST00000506244 C6orf223Q8N319 242 aa11.45□□□□□ -0.58
SNCA-209ENST00000506244 NUDT10Q8NFP7 164 aa11.45□□□□□ -0.58
SNCA-209ENST00000506244 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
SNCA-209ENST00000506244 NUDT11Q96G61 164 aa11.45□□□□□ -0.58
SNCA-209ENST00000506244 TRBV10-1A0A0K0K1A3 114 aa11.44□□□□□ -0.58
SNCA-209ENST00000506244 K7EP13 123 aa11.44□□□□□ -0.58
SNCA-209ENST00000506244 RTL8CO15255 209 aa11.44□□□□□ -0.58
SNCA-209ENST00000506244 GZMBP10144 247 aa11.44□□□□□ -0.58
SNCA-209ENST00000506244 ZNF56Q15929 161 aa11.44□□□□□ -0.58
SNCA-209ENST00000506244 ATP6V0E2Q8NHE4 81 aa11.44□□□□□ -0.58
SNCA-209ENST00000506244 TRAV9-2A0A087WT02 112 aa11.43□□□□□ -0.58
SNCA-209ENST00000506244 TRAV8-6A0A0B4J262 113 aa11.43□□□□□ -0.58
SNCA-209ENST00000506244 ZNF727A8MUV8 499 aa11.43□□□□□ -0.58
SNCA-209ENST00000506244 SRP19P09132 144 aaKnown RBP11.43□□□□□ -0.58
SNCA-209ENST00000506244 RAB4BP61018 213 aa11.43□□□□□ -0.58
SNCA-209ENST00000506244 FAM74A3Q4VXF1 159 aa11.43□□□□□ -0.58
SNCA-209ENST00000506244 Q6ZSN1 163 aa11.43□□□□□ -0.58
SNCA-209ENST00000506244 FAM231DQ6ZW35 169 aa11.43□□□□□ -0.58
SNCA-209ENST00000506244 C14orf178Q8N769 122 aaPredicted RBP11.43□□□□□ -0.58
SNCA-209ENST00000506244 RNASE7Q9H1E1 156 aaKnown RBP11.43□□□□□ -0.58
SNCA-209ENST00000506244 GTSF1LQ9H1H1 148 aa11.43□□□□□ -0.58
SNCA-209ENST00000506244 SMDT1Q9H4I9 107 aa11.43□□□□□ -0.58
SNCA-209ENST00000506244 MUC21A0A0G2JKD1 596 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 MUC21A0A140T8X8 626 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 GAGE12JA6NER3 117 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 PRSS29PA6NIE9 313 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 LINC00694P0DN24 101 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 GAGE1Q13065 139 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 GAGE4Q13068 117 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 GAGE5Q13069 117 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 PEA15Q15121 130 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 GAGE13Q4V321 117 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 DNAH2Q9P225 4427 aa11.42□□□□□ -0.58
SNCA-209ENST00000506244 GATCO43716 136 aaKnown RBP11.41□□□□□ -0.58
SNCA-209ENST00000506244 TRGC1P0CF51 173 aa11.41□□□□□ -0.58
SNCA-209ENST00000506244 EVI2AP22794 236 aa11.41□□□□□ -0.58
SNCA-209ENST00000506244 CTRLP40313 264 aa11.41□□□□□ -0.58
SNCA-209ENST00000506244 RAB14P61106 215 aa11.41□□□□□ -0.58
SNCA-209ENST00000506244 RPL36AP83881 106 aaKnown RBP11.41□□□□□ -0.58
SNCA-209ENST00000506244 CT83Q5H943 113 aa11.41□□□□□ -0.58
SNCA-209ENST00000506244 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
SNCA-209ENST00000506244 LELP1Q5T871 98 aa11.41□□□□□ -0.58
SNCA-209ENST00000506244 WFDC10BQ8IUB3 73 aa11.41□□□□□ -0.58
SNCA-209ENST00000506244 RPL36ALQ969Q0 106 aaKnown RBP11.41□□□□□ -0.58
SNCA-209ENST00000506244 KRTAP1-5Q9BYS1 174 aa11.41□□□□□ -0.58
SNCA-209ENST00000506244 EPPK1P58107 5090 aaKnown RBP11.41□□□□□ -0.58
SNCA-209ENST00000506244 A0A087WWC5 75 aa11.4□□□□□ -0.58
SNCA-209ENST00000506244 DNAH10OSP0CZ25 163 aa11.4□□□□□ -0.58
SNCA-209ENST00000506244 ERVFC1-1P60608 527 aa11.4□□□□□ -0.58
SNCA-209ENST00000506244 SSTP61278 116 aa11.4□□□□□ -0.58
SNCA-209ENST00000506244 WDR73Q6P4I2 378 aa11.4□□□□□ -0.58
SNCA-209ENST00000506244 LYZL1Q6UWQ5 148 aa11.4□□□□□ -0.58
SNCA-209ENST00000506244 LINC01551Q86U37 167 aa11.4□□□□□ -0.58
SNCA-209ENST00000506244 C10orf126Q8N4M7 172 aa11.4□□□□□ -0.58
SNCA-209ENST00000506244 A8MWL6 223 aa11.39□□□□□ -0.59
SNCA-209ENST00000506244 F5H697 171 aa11.39□□□□□ -0.59
SNCA-209ENST00000506244 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.39□□□□□ -0.59
SNCA-209ENST00000506244 HECTD4Q9Y4D8 3996 aa11.38□□□□□ -0.59
SNCA-209ENST00000506244 IGHV3-38A0A0C4DH36 116 aa11.38□□□□□ -0.59
SNCA-209ENST00000506244 H7C1H1 209 aa11.38□□□□□ -0.59
SNCA-209ENST00000506244 OR10G8Q8NGN5 311 aa11.38□□□□□ -0.59
SNCA-209ENST00000506244 CNFNQ9BYD5 112 aa11.38□□□□□ -0.59
SNCA-209ENST00000506244 TRBV7-3A0A075B6L6 115 aa11.37□□□□□ -0.59
SNCA-209ENST00000506244 MGPP08493 103 aa11.37□□□□□ -0.59
SNCA-209ENST00000506244 TMEM241Q24JQ0 296 aa11.37□□□□□ -0.59
SNCA-209ENST00000506244 LINC01556Q5JQF7 62 aa11.37□□□□□ -0.59
SNCA-209ENST00000506244 C15orf54Q8N8G6 183 aa11.37□□□□□ -0.59
SNCA-209ENST00000506244 FAT2Q9NYQ8 4349 aa11.37□□□□□ -0.59
SNCA-209ENST00000506244 NTF3P20783 257 aa11.36□□□□□ -0.59
SNCA-209ENST00000506244 LINC00315P59091 139 aa11.36□□□□□ -0.59
SNCA-209ENST00000506244 SMIM15Q7Z3B0 74 aa11.36□□□□□ -0.59
SNCA-209ENST00000506244 NFE4Q86UQ8 179 aa11.36□□□□□ -0.59
SNCA-209ENST00000506244 BORCS7Q96B45 105 aa11.36□□□□□ -0.59
SNCA-209ENST00000506244 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
SNCA-209ENST00000506244 OSTCQ9NRP0 149 aa11.36□□□□□ -0.59
SNCA-209ENST00000506244 NAT8Q9UHE5 227 aa11.36□□□□□ -0.59
SNCA-209ENST00000506244 KIF25-AS1Q9Y6Z4 181 aa11.36□□□□□ -0.59
SNCA-209ENST00000506244 UBE2D3P61077 147 aa11.35□□□□□ -0.59
SNCA-209ENST00000506244 UBE2D2P62837 147 aa11.35□□□□□ -0.59
SNCA-209ENST00000506244 TWIST1Q15672 202 aa11.35□□□□□ -0.59
SNCA-209ENST00000506244 GFRA4Q9GZZ7 299 aa11.35□□□□□ -0.59
SNCA-209ENST00000506244 MSRB1Q9NZV6 116 aa11.35□□□□□ -0.59
SNCA-209ENST00000506244 FAM231BA6NCW3 169 aa11.34□□□□□ -0.59
SNCA-209ENST00000506244 ADIRFQ15847 76 aa11.34□□□□□ -0.59
SNCA-209ENST00000506244 NEXN-AS1Q8NBZ9 246 aa11.34□□□□□ -0.59
SNCA-209ENST00000506244 TSKUQ8WUA8 353 aa11.34□□□□□ -0.59
SNCA-209ENST00000506244 GTSF1Q8WW33 167 aa11.34□□□□□ -0.59
SNCA-209ENST00000506244 Q9UF83 564 aa11.34□□□□□ -0.59
SNCA-209ENST00000506244 DNAH17Q9UFH2 4485 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms