RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 CEP250Q9BV73 2442 aa0.59□□□□□ -2.32
TOPBP1-204ENST00000505804 KMT2DO14686 5537 aa0.59□□□□□ -2.32
TOPBP1-204ENST00000505804 UTP20O75691 2785 aaKnown RBP0.59□□□□□ -2.32
TOPBP1-204ENST00000505804 SNRNP200O75643 2136 aaKnown RBP0.59□□□□□ -2.32
TOPBP1-204ENST00000505804 CDK12Q9NYV4 1490 aaPredicted RBP0.59□□□□□ -2.32
TOPBP1-204ENST00000505804 CITO14578 2027 aa0.59□□□□□ -2.32
TOPBP1-204ENST00000505804 ACACBO00763 2458 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 SOGA1O94964 1423 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 TRAV23DV6A0A075B6W5 121 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 FAM236AA0A1B0GUQ0 79 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 FAM236BA0A1B0GV22 79 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 J3QR89 54 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 CDC42EP2O14613 210 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 YPEL1O60688 119 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 LINC00694P0DN24 101 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 NCS1P62166 190 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 CCDC58Q4VC31 144 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 CLLU1Q5K131 121 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 CSAG1Q6PB30 78 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 TPT1P8Q9HAU6 139 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 LSM2Q9Y333 95 aaKnown RBP0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 GRIN2AQ12879 1464 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 C5orf42Q9H799 3197 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 AKAP13Q12802 2813 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 CCDC171Q6TFL3 1326 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 NALCNQ8IZF0 1738 aa0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 GOLGB1Q14789 3259 aaKnown RBP0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 TLN1Q9Y490 2541 aaKnown RBP0.58□□□□□ -2.32
TOPBP1-204ENST00000505804 MUC22E2RYF6 1773 aaPredicted RBP0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 TLN2Q9Y4G6 2542 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 PTPRMP28827 1452 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 TRBV20-1A0A075B6N2 111 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 NUPR2A6NF83 97 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 ZNF670-ZNF695F2Z2N8 137 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 K7ERU9 68 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 NDUFA2O43678 99 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 IGF2P01344 180 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 IGHV3-30P01768 117 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 IGHV3-30-5P0DP03 117 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 EFNA4P52798 201 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 RPL37AP61513 92 aaKnown RBP0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 RPS25P62851 125 aaKnown RBP0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 OCIAD2Q56VL3 154 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 IDO2Q6ZQW0 420 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 ATP6V0E2Q8NHE4 81 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 TSC22D3Q99576 134 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 NOP16Q9Y3C1 178 aaKnown RBP0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 CENPFP49454 3210 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 CEP290O15078 2479 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 MAP2P11137 1827 aaKnown RBP0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 PARP14Q460N5 1801 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 TENM2Q9NT68 2774 aa0.57□□□□□ -2.32
TOPBP1-204ENST00000505804 PTPRZ1P23471 2315 aaPredicted RBP0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 PLXNA1Q9UIW2 1896 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 MEGF8Q7Z7M0 2845 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 EP300Q09472 2414 aaPredicted RBP0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 NBEAQ8NFP9 2946 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 BCL9LQ86UU0 1499 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 DCHS1Q96JQ0 3298 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 TMEM30CPA0ZSE6 113 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 J3QLW9 94 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 M0R129 80 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 M0R2P5 195 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 NPFFO15130 113 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 TPST1O60507 370 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 IGKCP01834 107 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 GYPBP06028 91 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 IL7P13232 177 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 RHOHQ15669 191 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 LYPD5Q6UWN5 251 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 LINC00575Q6W349 94 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 ATP11AUNQ6ZP68 121 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 SLC25A26Q70HW3 274 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 SNX29P2Q8IUI4 249 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 VPS25Q9BRG1 176 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 TAS2R8Q9NYW2 309 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 ERG28Q9UKR5 140 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 BOKQ9UMX3 212 aaPredicted RBP0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 HTTP42858 3142 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 SMG1Q96Q15 3661 aaKnown RBP0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 NHSL1Q5SYE7 1610 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 USP34Q70CQ2 3546 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 CELSR1Q9NYQ6 3014 aa0.56□□□□□ -2.32
TOPBP1-204ENST00000505804 MGAM2Q2M2H8 2515 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 TRAV2A0A0B4J234 112 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 TRAV17A0A0B4J275 112 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 A0A0G2JMM0 328 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 POLR2JP52435 117 aaKnown RBP0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 FXYD4P59646 89 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 COPZ1P61923 177 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 KRTAP20-1Q3LI63 56 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 UNQ5815/PRO19632Q6UWF5 114 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 ATOH7Q8N100 152 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 DYNLRB2Q8TF09 96 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 PPDPFLQ8WWR9 84 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 DMAC1Q96GE9 116 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 SAR1AQ9NR31 198 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 MRPL35Q9NZE8 188 aaKnown RBP0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 LAMA3Q16787 3333 aa0.55□□□□□ -2.32
TOPBP1-204ENST00000505804 CUL7Q14999 1698 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms