RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 RNF185Q96GF1 192 aa7.39□□□□□ -1.23
CSF1R-203ENST00000504875 AGRNO00468 2067 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 H3BUA1 57 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 SCGB1C2P0DMR2 95 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 LAGE3Q14657 143 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 A0A087WWL8 130 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 OR11H12B2RN74 326 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 XGP55808 180 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 OR11H1Q8NG94 326 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 OR11H2Q8NH07 326 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 U3KQE9 123 aa7.38□□□□□ -1.23
CSF1R-203ENST00000504875 CELSR1Q9NYQ6 3014 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 HOXA3O43365 443 aaPredicted RBP7.37□□□□□ -1.23
CSF1R-203ENST00000504875 DEFB136Q30KP8 78 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 LGALS9BQ3B8N2 356 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 LGALS9CQ6DKI2 356 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 Q6ZUT4 128 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 SCGB3A1Q96QR1 104 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 DPH3P1Q9H4G8 78 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 ATP5LO75964 103 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 SRSF1Q07955 248 aaKnown RBP eCLIP7.37□□□□□ -1.23
CSF1R-203ENST00000504875 FOXI1Q12951 378 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 Q8N8P6 123 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 DUX3Q96PT4 197 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 MTORP42345 2549 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 ZNF56Q15929 161 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 SPINK13Q1W4C9 94 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 ZC2HC1BQ5TFG8 222 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 RPL39LQ96EH5 51 aaKnown RBP7.37□□□□□ -1.23
CSF1R-203ENST00000504875 Q96MF0 132 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 U3KQK5 164 aa7.37□□□□□ -1.23
CSF1R-203ENST00000504875 ACANP16112 2415 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 A0A096LNJ9 63 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 IGKCP01834 107 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 C12orf74Q32Q52 190 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 HIST2H2BDQ6DRA6 164 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 KLK9Q9UKQ9 250 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 TRBV25-1A0A075B6N4 114 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 IGKV2D-26A0A0A0MRZ7 120 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 GAGE2BQ13066 116 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 GAGE2EQ4V326 116 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 CEND1Q8N111 149 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 ZFAND2AQ8N6M9 145 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 GATD1Q8NB37 220 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 DYNLRB2Q8TF09 96 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 GAGE2DQ9UEU5 116 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 C2CD3Q4AC94 2353 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 DPM2O94777 84 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 COX8CQ7Z4L0 72 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 PGPEP1Q9NXJ5 209 aa7.36□□□□□ -1.23
CSF1R-203ENST00000504875 ZNF256Q9Y2P7 627 aaPredicted RBP7.36□□□□□ -1.23
CSF1R-203ENST00000504875 UTP20O75691 2785 aaKnown RBP7.35□□□□□ -1.23
CSF1R-203ENST00000504875 A0A1W2PRX2 142 aa7.35□□□□□ -1.23
CSF1R-203ENST00000504875 SNCGO76070 127 aa7.35□□□□□ -1.23
CSF1R-203ENST00000504875 KRTAP10-9P60411 292 aa7.35□□□□□ -1.23
CSF1R-203ENST00000504875 RPL32P62910 135 aaKnown RBP7.35□□□□□ -1.23
CSF1R-203ENST00000504875 SRSF2Q01130 221 aaKnown RBP7.35□□□□□ -1.23
CSF1R-203ENST00000504875 SRSF9Q13242 221 aaKnown RBP eCLIP7.35□□□□□ -1.23
CSF1R-203ENST00000504875 BBC3Q96PG8 261 aaPredicted RBP7.35□□□□□ -1.23
CSF1R-203ENST00000504875 LENEPQ9Y5L5 61 aa7.35□□□□□ -1.23
CSF1R-203ENST00000504875 SUMO2P61956 95 aaKnown RBP7.35□□□□□ -1.23
CSF1R-203ENST00000504875 VPREB3Q9UKI3 123 aa7.35□□□□□ -1.23
CSF1R-203ENST00000504875 USP24Q9UPU5 2620 aa7.35□□□□□ -1.23
CSF1R-203ENST00000504875 GAGE12JA6NER3 117 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 GAGE7O76087 117 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 TSPAN13O95857 204 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 GAGE12FP0CL80 117 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 GAGE12GP0CL81 117 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 GAGE12IP0CL82 117 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 GAGE4Q13068 117 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 GPHB5Q86YW7 130 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 KIR2DL4Q99706 377 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 IGHV4OR15-8A0A075B7B6 117 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 A0A087WW49 117 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 SCGB1D4Q6XE38 83 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 SMIM2Q9BVW6 85 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 JPT2Q9H910 190 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 MRPL35Q9NZE8 188 aaKnown RBP7.34□□□□□ -1.23
CSF1R-203ENST00000504875 E9PLD3 99 aa7.34□□□□□ -1.23
CSF1R-203ENST00000504875 HOXD3P31249 432 aaPredicted RBP7.34□□□□□ -1.23
CSF1R-203ENST00000504875 IGLV1-40P01703 118 aa7.33□□□□□ -1.24
CSF1R-203ENST00000504875 CRIP2P52943 208 aaPredicted RBP7.33□□□□□ -1.24
CSF1R-203ENST00000504875 H7C2G1 150 aa7.33□□□□□ -1.24
CSF1R-203ENST00000504875 J3QLI3 93 aa7.33□□□□□ -1.24
CSF1R-203ENST00000504875 CCDC179H3BU77 68 aa7.33□□□□□ -1.24
CSF1R-203ENST00000504875 EMP1P54849 157 aa7.33□□□□□ -1.24
CSF1R-203ENST00000504875 RRN3P1Q2M238 152 aa7.33□□□□□ -1.24
CSF1R-203ENST00000504875 ORMDL2Q53FV1 153 aa7.33□□□□□ -1.24
CSF1R-203ENST00000504875 C19orf54Q5BKX5 351 aa7.33□□□□□ -1.24
CSF1R-203ENST00000504875 CNFNQ9BYD5 112 aa7.33□□□□□ -1.24
CSF1R-203ENST00000504875 IGHV3OR16-12A0A075B7B8 117 aa7.32□□□□□ -1.24
CSF1R-203ENST00000504875 SLURP1P55000 103 aa7.32□□□□□ -1.24
CSF1R-203ENST00000504875 DLX4Q92988 240 aaPredicted RBP7.32□□□□□ -1.24
CSF1R-203ENST00000504875 ZANQ9Y493 2812 aa7.32□□□□□ -1.24
CSF1R-203ENST00000504875 IGHV3-73A0A0B4J1V6 119 aa7.32□□□□□ -1.24
CSF1R-203ENST00000504875 DEFB131AP59861 70 aa7.32□□□□□ -1.24
CSF1R-203ENST00000504875 CDIP1Q9H305 208 aa7.32□□□□□ -1.24
CSF1R-203ENST00000504875 KNCNA6PVL3 124 aa7.32□□□□□ -1.24
CSF1R-203ENST00000504875 PSMB8P28062 276 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms