RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 LY6HO94772 140 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 IGLV1-47P01700 117 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 IGHV3-30-3P0DP02 117 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 NTF3P20783 257 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 TGFBR1P36897 503 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 MPV17P39210 176 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 INSL3P51460 131 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 EIF5AP63241 154 aaKnown RBP2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 AKR1C1Q04828 323 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 SSBP1Q04837 148 aaKnown RBP2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 ZNF846Q147U1 533 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 KISS1Q15726 138 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 GLYATL3Q5SZD4 288 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 RPP25LQ8N5L8 163 aaKnown RBP2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 KLF14Q8TD94 323 aaPredicted RBP2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 RBPMSQ93062 196 aaKnown RBP2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 C14orf144Q96I85 54 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 OTORQ9NRC9 128 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 MRPL16Q9NX20 251 aaKnown RBP2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 TAS2R8Q9NYW2 309 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 TRAPPC1Q9Y5R8 145 aa2.79□□□□□ -1.96
PDLIM1P4-201ENST00000504327 ARHGAP32A7KAX9 2087 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 A0A096LNT2 108 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 PIGBOS1A0A0B4J2F0 54 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 A6NED7 52 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 A8MU10 97 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 F6UZH7 168 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 BUB1B-PAK6H3BSN5 160 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 M0R378 163 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 SLC25A20O43772 301 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 IFNA4P05014 189 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 KRTAP1-4P0C5Y4 121 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 CGB3P0DN86 165 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 CGB7P0DN87 165 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 SLC25A16P16260 332 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 FAUP35544 74 aaKnown RBP2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 EFNA4P52798 201 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 FXYD7P58549 80 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 LSM3P62310 102 aaKnown RBP2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 GNB2P62879 340 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 PSG7Q13046 419 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 ZNF181Q2M3W8 571 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 OCIAD2Q56VL3 154 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 SPRNQ5BIV9 151 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 C10orf91Q5T1B1 145 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 Q6ZR03 302 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 SPATA12Q7Z6I5 190 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 MIR7-3HGQ8N6C7 128 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 OR4S1Q8NGB4 309 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 C10orf105Q8TEF2 133 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 YPEL2Q96QA6 119 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 TMEM133Q9H2Q1 129 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 LINC00588Q9Y4M8 146 aa2.78□□□□□ -1.96
PDLIM1P4-201ENST00000504327 TRBV24-1A0A075B6N3 115 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TRBV7-6A0A0J9YX20 115 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 LOC107984640A0A0U1RRK4 108 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 C20orf202A1L168 122 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 GRIFINA4D1Z8 144 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 A8MWP4 228 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 LYNX1G3V0Z9 82 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 M0R233 179 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 PHOX2AO14813 284 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 PIN1P1O15428 100 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 SH2D1AO60880 128 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 IGKV1D-33P01593 117 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 IGKV1-33P01594 117 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 GPX1P07203 203 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 LYNX1P0DP58 116 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 MUC1P15941 1255 aaPredicted RBP2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 COL8A2P25067 703 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 UBE2BP63146 152 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 MEF2BQ02080 365 aaPredicted RBP2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 MPV17LQ2QL34 196 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 LINC01554Q52M75 96 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 Q5XG85 94 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 AMMECR1LQ6DCA0 310 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 OR2T2Q6IF00 324 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 GLIPR1L1Q6UWM5 242 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 C11orf42Q8N5U0 333 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 RBMXL1Q96E39 390 aaKnown RBP2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 SMR3AQ99954 134 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 ADAT1Q9BUB4 502 aaKnown RBP2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TTTY10Q9BZA0 68 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 C11orf1Q9H5F2 150 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TAF9BQ9HBM6 251 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 DYNLRB1Q9NP97 96 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TAS2R4Q9NYW5 299 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 COMMD3Q9UBI1 195 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TANC2Q9HCD6 1990 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 DOCK11Q5JSL3 2073 aa2.77□□□□□ -1.97
PDLIM1P4-201ENST00000504327 SVEP1Q4LDE5 3571 aa2.76□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TENM1Q9UKZ4 2725 aa2.76□□□□□ -1.97
PDLIM1P4-201ENST00000504327 IGHV1-58A0A0C4DH39 117 aa2.76□□□□□ -1.97
PDLIM1P4-201ENST00000504327 IGKV1-9A0A0C4DH69 117 aa2.76□□□□□ -1.97
PDLIM1P4-201ENST00000504327 NAP1L6A6NFF2 107 aa2.76□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TMEM14DPA8MWL7 114 aa2.76□□□□□ -1.97
PDLIM1P4-201ENST00000504327 A8MWP6 167 aa2.76□□□□□ -1.97
PDLIM1P4-201ENST00000504327 TMEM256-PLSCR3K7ERE1 68 aa2.76□□□□□ -1.97
PDLIM1P4-201ENST00000504327 LEPROTO15243 131 aa2.76□□□□□ -1.97
PDLIM1P4-201ENST00000504327 NCR2O95944 276 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms